MNase titration reveals differences between nucleosome occupancy and chromatin accessibility (Q34525346)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27151365%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

title

MNase titration reveals differences between nucleosome occupancy and chromatin accessibility (English)

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4 April 2020

1

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Aimée M Deaton

7

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Jennifer Urban

8

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Peter J Park

10

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author name string

April Cook

2

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4 April 2020

Sarah K Bowman

3

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4 April 2020

Britta Mueller

4

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4 April 2020

Burak H Alver

5

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4 April 2020

Sharmistha Kundu

6

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4 April 2020

Erica Larschan

9

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4 April 2020

Robert E Kingston

11

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4 April 2020

Michael Y Tolstorukov

12

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language of work or name

English

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publication date

6 May 2016

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4 April 2020

published in

Nature Communications

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volume

7

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4 April 2020

page(s)

11485

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Creative Commons Attribution 4.0 International

4 April 2020

copyright license

start time

6 May 2016

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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describes a project that uses

limma

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22 June 2022

https://europepmc.org/article/PMC/4859066

based on heuristic

inferred from PubMed Central ID database lookup

exact match

https://scigraph.springernature.com/pub.10.1038/ncomms11485

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cites work

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Two distinct promoter architectures centered on dynamic nucleosomes control ribosomal protein gene transcription

7 July 2018

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Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

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7 July 2018

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Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements

7 July 2018

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Standardized collection of MNase-seq experiments enables unbiased dataset comparisons

7 July 2018

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Three-dimensional folding and functional organization principles of the Drosophila genome

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Epigenome characterization at single base-pair resolution.

7 July 2018

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Analysis of primary structure of chromatin with next-generation sequencing

7 July 2018

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Nucleosome fragility reveals novel functional states of chromatin and poises genes for activation

7 July 2018

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High-resolution genome-wide mapping of the primary structure of chromatin

7 July 2018

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The effect of micrococcal nuclease digestion on nucleosome positioning data

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Chromatin Structure: A Repeating Unit of Histones and DNA

7 July 2018

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Removal of positioned nucleosomes from the yeast PHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements.

7 July 2018

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Developmental regulation of two 5S ribosomal RNA genes

7 July 2018

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Contribution of histone sequence preferences to nucleosome organization: proposed definitions and methodology

7 July 2018

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Accessibility of the Drosophila genome discriminates PcG repression, H4K16 acetylation and replication timing.

21 January 2018

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Nuclear reorganisation and chromatin decondensation are conserved, but distinct, mechanisms linked to Hox gene activation.

21 January 2018

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Neural stem cells, neurons, and glia.

21 January 2018

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21 January 2018

Identifiers

DOI

10.1038/NCOMMS11485

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27151365%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

4 April 2020

ADS bibcode

2016NatCo...711485M

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0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27151365%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

1 reference