Epigenome characterization at single base-pair resolution. (Q34057123)

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15 January 2020

title

Epigenome characterization at single base-pair resolution (English)

1 reference

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15 January 2020

2

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5

Steven Henikoff

1 reference

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15 January 2020

1

Jorja G Henikoff

1 reference

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15 January 2020

author name string

Kristina Krassovsky

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22025700%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

David M MacAlpine

series ordinal

4

1 reference

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15 January 2020

language of work or name

English

0 references

publication date

24 October 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22025700%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

15 January 2020

published in

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15 January 2020

volume

108

1 reference

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15 January 2020

page(s)

18318-18323

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15 January 2020

issue

45

1 reference

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Heat shock reduces stalled RNA polymerase II and nucleosome turnover genome-wide

15 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Multiple sequence-specific factors generate the nucleosome-depleted region on CLN2 promoter.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Nucleosome fragility reveals novel functional states of chromatin and poises genes for activation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Chromatin particle spectrum analysis: a method for comparative chromatin structure analysis using paired-end mode next-generation DNA sequencing.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Effect of PCR extension temperature on high-throughput sequencing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Extensive role of the general regulatory factors, Abf1 and Rap1, in determining genome-wide chromatin structure in budding yeast

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Mechanisms that specify promoter nucleosome location and identity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

A temporal threshold for formaldehyde crosslinking and fixation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Genome-wide profiling of salt fractions maps physical properties of chromatin

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Centromere identity is specified by a single centromeric nucleosome in budding yeast

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Antagonistic forces that position nucleosomes in vivo.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

An improved map of conserved regulatory sites for Saccharomyces cerevisiae

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Chromatin remodeling by nucleosome disassembly in vitro

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Mapping of genetic and epigenetic regulatory networks using microarrays

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Rapid spontaneous accessibility of nucleosomal DNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

The Isw2 chromatin remodeling complex represses early meiotic genes upon recruitment by Ume6p

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

Chromosomal subunits in active genes have an altered conformation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3215028

H2A.Z nucleosomes enriched over active genes are homotypic

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1110731108

Comparative analysis of H2A.Z nucleosome organization in the human and yeast genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1110731108

Mapping regulatory elements by DNaseI hypersensitivity chip (DNase-Chip).

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1110731108

Nucleosome stability mediated by histone variants H3.3 and H2A.Z.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1110731108

Subunit structure of chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1110731108

21 January 2018

Identifiers

DOI

10.1073/PNAS.1110731108

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22025700%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

0 references

1 reference

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15 January 2020

1 reference