Standardized collection of MNase-seq experiments enables unbiased dataset comparisons (Q34258572)

31 July 2017

Standardized collection of MNase-seq experiments enables unbiased dataset comparisons (English)

1 reference

31 July 2017

1 reference

Jason M Rizzo

1

1 reference

31 July 2017

Jonathan E Bard

series ordinal

2

1 reference

31 July 2017

Michael J Buck

series ordinal

3

1 reference

31 July 2017

6 May 2012

1 reference

31 July 2017

BMC Molecular Biology

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31 July 2017

13

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31 July 2017

15

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2199-13-15

31 July 2017

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Integrity of chromatin and replicating DNA in nuclei released from fission yeast by semi-automated grinding in liquid nitrogen

6 July 2018

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Genome-wide measurement of histone H3 replacement dynamics in yeast

6 July 2018

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Tup1 stabilizes promoter nucleosome positioning and occupancy at transcriptionally plastic genes

6 July 2018

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Analysis of Histone Exchange during Chromatin Purification

6 July 2018

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The stress response factors Yap6, Cin5, Phd1, and Skn7 direct targeting of the conserved co-repressor Tup1-Ssn6 in S. cerevisiae.

6 July 2018

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Nucleosome fragility reveals novel functional states of chromatin and poises genes for activation

6 July 2018

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High-resolution genome-wide mapping of the primary structure of chromatin

6 July 2018

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Chromatin particle spectrum analysis: a method for comparative chromatin structure analysis using paired-end mode next-generation DNA sequencing.

6 July 2018

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The sequence read archive

6 July 2018

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Genome-wide mapping of nucleosomes in yeast

6 July 2018

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High-resolution nucleosome mapping reveals transcription-dependent promoter packaging

6 July 2018

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A compiled and systematic reference map of nucleosome positions across the Saccharomyces cerevisiae genome

6 July 2018

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Nucleosome positioning: how is it established, and why does it matter?

6 July 2018

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How eukaryotic genes are transcribed

6 July 2018

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Genome-wide views of chromatin structure

6 July 2018

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Isolation of active regulatory elements from eukaryotic chromatin using FAIRE (Formaldehyde Assisted Isolation of Regulatory Elements).

6 July 2018

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

6 July 2018

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Nucleosome positioning and gene regulation: advances through genomics

6 July 2018

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Activator control of nucleosome occupancy in activation and repression of transcription

6 July 2018

1 reference

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Nucleosome organization in the Drosophila genome.

6 July 2018

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Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation

6 July 2018

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A chromatin-mediated mechanism for specification of conditional transcription factor targets

6 July 2018

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Transcriptional repression by Tup1-Ssn6.

6 July 2018

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ChIPOTle: a user-friendly tool for the analysis of ChIP-chip data

6 July 2018

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Antagonistic remodelling by Swi-Snf and Tup1-Ssn6 of an extensive chromatin region forms the background for FLO1 gene regulation

6 July 2018

1 reference

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PicoGreen quantitation of DNA: effective evaluation of samples pre- or post-PCR.

6 July 2018

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Cleavage of DNA in nuclei and chromatin with staphylococcal nuclease

6 July 2018

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Yeast Chromatin Subunit Structure

6 July 2018

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Genome-wide mapping of nucleosome positions in Schizosaccharomyces pombe.

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2199-13-15

Contribution of histone sequence preferences to nucleosome organization: proposed definitions and methodology

21 January 2018

1 reference

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https://api.crossref.org/works/10.1186%2F1471-2199-13-15

Ssn6-Tup1 regulates RNR3 by positioning nucleosomes and affecting the chromatin structure at the upstream repression sequence.

21 January 2018

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https://api.crossref.org/works/10.1186%2F1471-2199-13-15

Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22559821

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A preoccupied position on nucleosomes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22559821

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2199-13-15

1 reference

Dimensions Publication ID

31 July 2017

0 references

1 reference

31 July 2017

1 reference