Discovery of short linear motif-mediated interactions through phage display of intrinsically disordered regions of the human proteome (Q36230625)

12 August 2017

Discovery of short linear motif-mediated interactions through phage display of intrinsically disordered regions of the human proteome (English)

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12 August 2017

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Cecilia Blikstad

7

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Ylva Ivarsson

object named as

Ylva Ivarsson

11

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Norman Davey

object named as

Norman E Davey

1

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author name string

Moon-Hyeong Seo

2

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12 August 2017

Vikash Kumar Yadav

3

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12 August 2017

Jouhyun Jeon

4

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12 August 2017

Satra Nim

5

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12 August 2017

Izabella Krystkowiak

6

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12 August 2017

Debbie Dong

8

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12 August 2017

Natalia Markova

9

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12 August 2017

Philip M Kim

10

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12 August 2017

language of work or name

English

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publication date

21 December 2016

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12 August 2017

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12 August 2017

284

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12 August 2017

485-498

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12 August 2017

3

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A proteome-scale map of the human interactome network

12 August 2017

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The BioPlex Network: A Systematic Exploration of the Human Interactome

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Short linear motifs: ubiquitous and functionally diverse protein interaction modules directing cell regulation.

21 January 2018

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Attributes of short linear motifs.

21 January 2018

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Assembly of Cell Regulatory Systems Through Protein Interaction Domains

21 January 2018

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Short linear motifs - ex nihilo evolution of protein regulation

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The calcineurin signaling network evolves via conserved kinase-phosphatase modules that transcend substrate identity

21 January 2018

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Proteome-wide analysis of human disease mutations in short linear motifs: neglected players in cancer?

21 January 2018

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How viruses hijack cell regulation

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How pathogens use linear motifs to perturb host cell networks

21 January 2018

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Convergent evolution and mimicry of protein linear motifs in host-pathogen interactions

21 January 2018

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Binary classification of protein molecules into intrinsically disordered and ordered segments

21 January 2018

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Function and structure of inherently disordered proteins

21 January 2018

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A million peptide motifs for the molecular biologist

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Experimental detection of short regulatory motifs in eukaryotic proteins: tips for good practice as well as for bad

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ELM 2016--data update and new functionality of the eukaryotic linear motif resource

21 January 2018

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A specificity map for the PDZ domain family

21 January 2018

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Phage display can select over-hydrophobic sequences that may impair prediction of natural domain-peptide interactions

21 January 2018

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High-throughput methods for identification of protein-protein interactions involving short linear motifs.

21 January 2018

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Large-scale interaction profiling of PDZ domains through proteomic peptide-phage display using human and viral phage peptidomes

21 January 2018

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Interaction analysis through proteomic phage display.

21 January 2018

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Autoantigen discovery with a synthetic human peptidome

21 January 2018

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Proteomic peptide phage display uncovers novel interactions of the PDZ1-2 supramodule of syntenin

21 January 2018

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Plasticity of PDZ domains in ligand recognition and signaling.

21 January 2018

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SLiMFinder: a probabilistic method for identifying over-represented, convergently evolved, short linear motifs in proteins.

21 January 2018

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ELM--the database of eukaryotic linear motifs

21 January 2018

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EVH1 domains: structure, function and interactions

21 January 2018

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21 January 2018

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Interactions controlling the assembly of nuclear-receptor heterodimers and co-activators

21 January 2018

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Structural basis for recognition of acidic-cluster dileucine sequence by GGA1

21 January 2018

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The structural flexibility of the shank1 PDZ domain is important for its binding to different ligands

21 January 2018

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Direct interaction of GluRdelta2 with Shank scaffold proteins in cerebellar Purkinje cells

21 January 2018

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Motif switches: decision-making in cell regulation

21 January 2018

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Palladin is a novel binding partner for Ena/VASP family members.

21 January 2018

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A signature motif in transcriptional co-activators mediates binding to nuclear receptors

21 January 2018

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Core LXXLL motif sequences in CREB-binding protein, SRC1, and RIP140 define affinity and selectivity for steroid and retinoid receptors

21 January 2018

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GGA autoinhibition revisited

21 January 2018

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The sorLA cytoplasmic domain interacts with GGA1 and -2 and defines minimum requirements for GGA binding

21 January 2018

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PSD-95 assembles a ternary complex with the N-methyl-D-aspartic acid receptor and a bivalent neuronal NO synthase PDZ domain

21 January 2018

1 reference

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HIPPIE: Integrating protein interaction networks with experiment based quality scores.

21 January 2018

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

21 January 2018

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GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

21 January 2018

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Morphology and dynamics of clathrin/GGA1-coated carriers budding from the trans-Golgi network

21 January 2018

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Insights into the phosphoregulation of beta-secretase sorting signal by the VHS domain of GGA1.

21 January 2018

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Do GGA adaptors bind internal DXXLL motifs?

21 January 2018

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Motif co-regulation and co-operativity are common mechanisms in transcriptional, post-transcriptional and post-translational regulation

21 January 2018

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Cell signaling in space and time: where proteins come together and when they're apart

21 January 2018

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Phosphotyrosine-binding domains in signal transduction

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Phospho-Ser/Thr-binding domains: navigating the cell cycle and DNA damage response

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Modified phage peptide libraries as a tool to study specificity of phosphorylation and recognition of tyrosine containing peptides

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Simplified synthetic antibody libraries

21 January 2018

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Phage display in pharmaceutical biotechnology

21 January 2018

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Studying binding specificities of peptide recognition modules by high-throughput phage display selections

21 January 2018

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Engineering and analysis of peptide-recognition domain specificities by phage display and deep sequencing

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

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The CRAPome: a contaminant repository for affinity purification-mass spectrometry data

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Gene ontology: tool for the unification of biology

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Cytoscape Web: an interactive web-based network browser

21 January 2018

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GYF domain proteomics reveals interaction sites in known and novel target proteins

21 January 2018

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The GGA proteins: adaptors on the move

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The LxxLL motif: a multifunctional binding sequence in transcriptional regulation

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21 January 2018

Identifiers

DOI

10.1111/FEBS.13995

1 reference

12 August 2017

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