Ribosome assembly factors prevent premature translation initiation by 40S assembly intermediates (Q41615171)

5 October 2017

Ribosome assembly factors prevent premature translation initiation by 40S assembly intermediates (English)

1 reference

5 October 2017

9

Georgios Skiniotis

1 reference

5 October 2017

Shanshan Cheng

5

0 references

Katrin Karbstein

object named as

Katrin Karbstein

8

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author name string

Bethany S Strunk

1

1 reference

5 October 2017

Cherisse R Loucks

2

1 reference

5 October 2017

Min Su

3

1 reference

5 October 2017

Harish Vashisth

4

1 reference

5 October 2017

Justin Schilling

6

1 reference

5 October 2017

Charles L Brooks

7

1 reference

5 October 2017

language of work or name

English

0 references

publication date

11 August 2011

1 reference

5 October 2017

5

1 reference

based on heuristic

inferred from page(s)

published in

Science

1 reference

5 October 2017

333

1 reference

5 October 2017

1449-1453

1 reference

5 October 2017

6048

1 reference

Protein-protein interactions within late pre-40S ribosomes.

5 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Crystal structure of the eukaryotic ribosome

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Roles of Dim2 in ribosome assembly

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Visualizing ribosome biogenesis: parallel assembly pathways for the 30S subunit

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

An RNA conformational switch regulates pre-18S rRNA cleavage.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Applications of the molecular dynamics flexible fitting method

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Analysis of two human pre-ribosomal factors, bystin and hTsr1, highlights differences in evolution of ribosome biogenesis between yeast and mammals.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

The role of L1 stalk-tRNA interaction in the ribosome elongation cycle

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Characterization of the nuclear export adaptor protein Nmd3 in association with the 60S ribosomal subunit

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Cracking pre-40S ribosomal subunit structure by systematic analyses of RNA-protein cross-linking

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

A local role for the small ribosomal subunit primary binder rpS5 in final 18S rRNA processing in yeast

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Appropriate maturation and folding of 16S rRNA during 30S subunit biogenesis are critical for translational fidelity

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Comprehensive Molecular Structure of the Eukaryotic Ribosome

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Powering through ribosome assembly

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Nob1 binds the single-stranded cleavage site D at the 3'-end of 18S rRNA with its PIN domain

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Position of eukaryotic translation initiation factor eIF1A on the 40S ribosomal subunit mapped by directed hydroxyl radical probing.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Molecular dynamics flexible fitting: a practical guide to combine cryo-electron microscopy and X-ray crystallography

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Structural Aspects of RbfA Action during Small Ribosomal Subunit Assembly

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

The eukaryotic translation initiation factors eIF1 and eIF1A induce an open conformation of the 40S ribosome

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Hrr25-dependent phosphorylation state regulates organization of the pre-40S subunit

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Structural roles for human translation factor eIF3 in initiation of protein synthesis

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

The putative NTPase Fap7 mediates cytoplasmic 20S pre-rRNA processing through a direct interaction with Rps14.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Roles of eukaryotic ribosomal proteins in maturation and transport of pre-18S rRNA and ribosome function

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Interaction of Era with the 30S ribosomal subunit implications for 30S subunit assembly

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

The carboxy-terminal extension of yeast ribosomal protein S14 is necessary for maturation of 43S preribosomes.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Dim2p, a KH-domain protein required for small ribosomal subunit synthesis

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Position of eukaryotic initiation factor eIF1 on the 40S ribosomal subunit determined by directed hydroxyl radical probing

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

High resolution structure of the large ribosomal subunit from a mesophilic eubacterium

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Structure of the 80S ribosome from Saccharomyces cerevisiae--tRNA-ribosome and subunit-subunit interactions

6 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

6 June 2018

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Recognition of cognate transfer RNA by the 30S ribosomal subunit

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Structure of the 30S ribosomal subunit

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

X-ray crystal structures of 70S ribosome functional complexes

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

NMD3 encodes an essential cytoplasmic protein required for stable 60S ribosomal subunits in Saccharomyces cerevisiae

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

The Saccharomyces cerevisiae homologue of mammalian translation initiation factor 6 does not function as a translation initiation factor

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Alignment of conduits for the nascent polypeptide chain in the ribosome-Sec61 complex

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

A model of protein synthesis based on cryo-electron microscopy of the E. coli ribosome

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Three-dimensional reconstruction of mammalian 40 S ribosomal subunit

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Immature small ribosomal subunits can engage in translation initiation in Saccharomyces cerevisiae

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

The adenosine dimethyltransferase KsgA recognizes a specific conformational state of the 30S ribosomal subunit

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

Analysis of the In Vivo Assembly Pathway of Eukaryotic 40S Ribosomal Proteins

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402165

RNA helicase Prp43 and its co-factor Pfa1 promote 20 to 18 S rRNA processing catalyzed by the endonuclease Nob1.

30 September 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Autophosphorylation of Archaeoglobus fulgidus Rio2 and crystal structures of its nucleotide-metal ion complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Rio2p, an evolutionarily conserved, low abundant protein kinase essential for processing of 20 S Pre-rRNA in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Late cytoplasmic maturation of the small ribosomal subunit requires RIO proteins in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

The DIM1 gene responsible for the conserved m6(2)Am6(2)A dimethylation in the 3'-terminal loop of 18 S rRNA is essential in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Structural and Functional Divergence within the Dim1/KsgA Family of rRNA Methyltransferases

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Mechanistic insight into the ribosome biogenesis functions of the ancient protein KsgA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Crystal structure of A. fulgidus Rio2 defines a new family of serine protein kinases

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Bms1p, a novel GTP-binding protein, and the related Tsr1p are required for distinct steps of 40S ribosome biogenesis in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Three-dimensional reconstruction from a single-exposure, random conical tilt series applied to the 50S ribosomal subunit of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

An archaeal Dim2-like protein, aDim2p, forms a ternary complex with a/eIF2 alpha and the 3' end fragment of 16S rRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Ltv1 is required for efficient nuclear export of the ribosomal small subunit in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Experimental verification of conformational variation of human fatty acid synthase as predicted by normal mode analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Recognition of the regulatory nascent chain TnaC by the ribosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

The tandem affinity purification (TAP) method: a general procedure of protein complex purification

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Maturation and intranuclear transport of pre-ribosomes requires Noc proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Negative staining and image classification — powerful tools in modern electron microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

EMAN: semiautomated software for high-resolution single-particle reconstructions

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

FREALIGN: high-resolution refinement of single particle structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Structures of modified eEF2 80S ribosome complexes reveal the role of GTP hydrolysis in translocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

A method of focused classification, based on the bootstrap 3D variance analysis, and its application to EF-G-dependent translocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Normal mode based flexible fitting of high-resolution structure into low-resolution experimental data from cryo-EM.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Flexible multi-scale fitting of atomic structures into low-resolution electron density maps with elastic network normal mode analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Localization of eukaryote-specific ribosomal proteins in a 5.5-Å cryo-EM map of the 80S eukaryotic ribosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

VMD: visual molecular dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Comparison of fungal 80 S ribosomes by cryo-EM reveals diversity in structure and conformation of rRNA expansion segments

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Scalable molecular dynamics with NAMD

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Extending the treatment of backbone energetics in protein force fields: limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Using Situs for the integration of multi-resolution structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

Architecture of the Ribosome–Channel Complex Derived from Native Membranes

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1208245

A conserved rRNA methyltransferase regulates ribosome biogenesis

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21835981

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1126/SCIENCE.1208245

1 reference

5 October 2017

1 reference

5 October 2017

1 reference