Diversity and temporal patterns of planktonic protist assemblages at a Mediterranean Long Term Ecological Research site. (Q39345823)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

title

Diversity and temporal patterns of planktonic protist assemblages at a Mediterranean Long Term Ecological Research site (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

0 references

1 reference

Wiebe H.C.F. Kooistra

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

Adriana Zingone

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

author name string

R Piredda

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

M P Tomasino

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

A M D'Erchia

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

C Manzari

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

G Pesole

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

M Montresor

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

D Sarno

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

publication date

26 September 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

FEMS Microbiology Ecology

24 March 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

volume

93

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

maintained by WikiProject

24 March 2020

1 reference

Basic local alignment search tool

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Depicting more accurate pictures of protistan community complexity using pyrosequencing of hypervariable SSU rRNA gene regions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Metabarcoding reveals environmental factors influencing spatio-temporal variation in pelagic micro-eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

A guide to statistical analysis in microbial ecology: a community-focused, living review of multivariate data analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

The Western English Channel contains a persistent microbial seed bank

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Marine protistan diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Defining DNA-based operational taxonomic units for microbial-eukaryote ecology

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Global sequencing: a review of current molecular data and new methods available to assess microbial diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Metabarcoding avian diets at airports: implications for birdstrike hazard management planning

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Global warming-enhanced stratification and mass mortality events in the Mediterranean.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

The founding charter of the Genomic Observatories Network

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Study of genetic diversity of eukaryotic picoplankton in different oceanic regions by small-subunit rRNA gene cloning and sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Quantifying temporal change in biodiversity: challenges and opportunities

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Ciliates and the rare biosphere: a review

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

UCHIME improves sensitivity and speed of chimera detection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Benthic protists: the under-charted majority

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Seasonal variations of marine protist community structure based on taxon-specific traits using the eastern English Channel as a model coastal system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Galaxy: a platform for interactive large-scale genome analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Defining seasonal marine microbial community dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Seasonality in ocean microbial communities.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Quantification of diatom and dinoflagellate biomasses in coastal marine seawater samples by real-time PCR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Estimating Protistan Diversity Using High-Throughput Sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Monthly to interannual variability of microbial eukaryote assemblages at four depths in the eastern North Pacific

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

The ocean sampling day consortium

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq Illumina sequencing platform.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Global patterns of pelagic dinoflagellate diversity across protist size classes unveiled by metabarcoding

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Investigating microbial eukaryotic diversity from a global census: insights from a comparison of pyrotag and full-length sequences of 18S rRNA genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Patterns of rare and abundant marine microbial eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Unexpected diversity of small eukaryotes in deep-sea Antarctic plankton

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

UniFrac: an effective distance metric for microbial community comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Long-term datasets in biodiversity research and monitoring: assessing change in ecological communities through time

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Insights into global diatom distribution and diversity in the world's ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Short-term dynamics of diversity patterns: evidence of continual reassembly within lacustrine small eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

The influence of invasive jellyfish blooms on the aquatic microbiome in a coastal lagoon (Varano, SE Italy) detected by an Illumina-based deep sequencing strategy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Diversity in a hidden world: potential and limitation of next-generation sequencing for surveys of molecular diversity of eukaryotic microorganisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Oceanic 18S rDNA sequences from picoplankton reveal unsuspected eukaryotic diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

The molecular ecology of microbial eukaryotes unveils a hidden world

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Protistan microbial observatory in the Cariaco Basin, Caribbean. II. Habitat specialization.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Eukaryotic richness in the abyss: insights from pyrotag sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Ancient and modern environmental DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

FastTree 2--approximately maximum-likelihood trees for large alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

The correlation between rDNA copy number and genome size in eukaryotes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Multivariate analyses in microbial ecology

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Diversity and Phylogeny of Gymnodiniales (Dinophyceae) from the NW Mediterranean Sea Revealed by a Morphological and Molecular Approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Insights into the phylogeny and coding potential of microbial dark matter

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Temporal changes in population structure of a marine planktonic diatom

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Evolution. Searching for new branches on the tree of life.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S rRNA gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Metabarcoding vs. morphological identification to assess diatom diversity in environmental studies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Two decades of describing the unseen majority of aquatic microbial diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

The alternation of different morphotypes in the seasonal cycle of the toxic diatom Pseudo-nitzschia galaxiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

A survey of cryptomonad diversity and seasonality at a coastal Mediterranean site

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Phylogenetic patterns are not proxies of community assembly mechanisms (they are far better)

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

BIOVOLUME CALCULATION FOR PELAGIC AND BENTHIC MICROALGAE

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Small-scale temporal and spatial variations in protistan community composition at the San Pedro Ocean Time-series station off the coast of southern California

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Genetic diversity of eukaryotic ultraphytoplankton in the Gulf of Naples during an annual cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Identifying Pseudo-nitzschia species in natural samples using genus-specific PCR primers and clone libraries

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Diversity and temporal pattern of Pseudo-nitzschia species (Bacillariophyceae) through the molecular lens

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Bacteriastrum parallelum sp. nov., a new diatom from the Gulf of Naples, and new observations on B. furcatum (Chaetocerotaceae, Bacillariophyta)

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Plankton in the open Mediterranean Sea: a review

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Seasonal dynamics in the abundance of Micromonas pusilla (Prasinophyceae) and its viruses in the Gulf of Naples (Mediterranean Sea)

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Coastal Phytoplankton Do Not Rest in Winter

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

Geometric models for calculating cell biovolume and surface area for phytoplankton

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW200

21 January 2018

Identifiers

DOI

10.1093/FEMSEC/FIW200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27677681%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

1 reference