Galaxy: a platform for interactive large-scale genome analysis (Q29547494)

5 July 2017

title

Galaxy: a platform for interactive large-scale genome analysis (English)

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Laura Elnitski

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Daniel Blankenberg

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Daniel Blankenberg

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8

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Webb Miller

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Webb Miller

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W James Kent

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James Taylor

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Belinda Giardine

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Richard Burhans

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Cathy Riemer

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Istvan Albert

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Prachi Shah

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Yi Zhang

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publication date

16 September 2005

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=16169926

5 July 2017

language of work or name

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23 April 2017

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5 July 2017

volume

15

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5 July 2017

issue

10

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5 July 2017

page(s)

1451-1455

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Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

5 July 2017

cites work

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

Database resources of the National Center for Biotechnology Information

23 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

The ENCODE (ENCyclopedia Of DNA Elements) Project

23 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

Adaptive evolution drives divergence of a hybrid inviability gene between two species of Drosophila

23 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

The human genome browser at UCSC

23 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

Comparative analysis of the gene-dense ACHE/TFR2 region on human chromosome 7q22 with the orthologous region on mouse chromosome 5

23 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

23 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

A high-resolution map of active promoters in the human genome

23 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

The UCSC Table Browser data retrieval tool

23 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

23 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

Evaluation of regulatory potential and conservation scores for detecting cis-regulatory modules in aligned mammalian genome sequences

23 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

Regulatory potential scores from genome-wide three-way alignments of human, mouse, and rat

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

zPicture: dynamic alignment and visualization tool for analyzing conservation profiles

3 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

Use of chromatin immunoprecipitation assays in genome-wide location analysis of mammalian transcription factors

3 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

Identification and characterization of multi-species conserved sequences

3 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

Identification and functional analysis of human transcriptional promoters

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

The EBI SRS server-new features

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

ISYS: a decentralized, component-based approach to the integration of heterogeneous bioinformatics resources

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

SRS--an indexing and retrieval tool for flat file data libraries.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

The biology workbench—A seamless database and analysis environment for the biologist

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

Large-scale search for genes on which positive selection may operate

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1240089

26 November 2018

Identifiers

DOI

10.1101/GR.4086505

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OpenCitations bibliographic resource ID

5 July 2017

80272

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

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5 July 2017

1 reference