Enhancer-core-promoter specificity separates developmental and housekeeping gene regulation. (Q38927792)

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scientific article published on 15 December 2014

Enhancer–core-promoter specificity separates developmental and housekeeping gene regulation

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English	Enhancer-core-promoter specificity separates developmental and housekeeping gene regulation.	scientific article published on 15 December 2014	Enhancer–core-promoter specificity separates developmental and housekeeping gene regulation

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scholarly article

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25 February 2020

Enhancer-core-promoter specificity separates developmental and housekeeping gene regulation (English)

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25 February 2020

housekeeping gene

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Alexander Stark

7

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25 February 2020

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Muhammad A Zabidi

1

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25 February 2020

Cosmas D Arnold

2

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25 February 2020

Katharina Schernhuber

3

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25 February 2020

Michaela Pagani

4

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25 February 2020

Martina Rath

5

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25 February 2020

Olga Frank

6

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25 February 2020

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publication date

15 December 2014

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25 February 2020

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25 February 2020

518

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25 February 2020

7540

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25 February 2020

556-559

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25 February 2020

https://scigraph.springernature.com/pub.10.1038/nature13994

0 references

Looping back to leap forward: transcription enters a new era

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Different core promoters possess distinct regulatory activities in the Drosophila embryo

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Selectivity, sharing and competitive interactions in the regulation of Hoxb genes

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Promoter specificity mediates the independent regulation of neighboring genes.

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Perspectives on the RNA polymerase II core promoter

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

The TCT motif, a key component of an RNA polymerase II transcription system for the translational machinery

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Genomic regulatory blocks underlie extensive microsynteny conservation in insects

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Comparative genomics of Drosophila and human core promoters

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Tools for neuroanatomy and neurogenetics in Drosophila

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Genome-wide quantitative enhancer activity maps identified by STARR-seq

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Hormone-responsive enhancer-activity maps reveal predictive motifs, indirect repression, and targeting of closed chromatin

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Expression of a β-globin gene is enhanced by remote SV40 DNA sequences

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Computational analysis of core promoters in the Drosophila genome

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

The downstream promoter element DPE appears to be as widely used as the TATA box in Drosophila core promoters

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Uncovering cis-regulatory sequence requirements for context-specific transcription factor binding

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Dissection of thousands of cell type-specific enhancers identifies dinucleotide repeat motifs as general enhancer features.

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Dynamic changes in the genomic localization of DNA replication-related element binding factor during the cell cycle

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Identification of functional elements and regulatory circuits by Drosophila modENCODE

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Promoting developmental transcription

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

TRF2, but not TBP, mediates the transcription of ribosomal protein genes

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Transcription of histone gene cluster by differential core-promoter factors

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

TRF2 associates with DREF and directs promoter-selective gene expression in Drosophila

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Switching of the core transcription machinery during myogenesis

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Shifting players and paradigms in cell-specific transcription

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Developmental regulation of transcription initiation: more than just changing the actors

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila.

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Quantitative genome-wide enhancer activity maps for five Drosophila species show functional enhancer conservation and turnover during cis-regulatory evolution

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Gene ontology: tool for the unification of biology

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Global analysis of patterns of gene expression during Drosophila embryogenesis

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Using FlyAtlas to identify better Drosophila melanogaster models of human disease

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Combining evidence using p-values: application to sequence homology searches

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

BEDTools: a flexible suite of utilities for comparing genomic features

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Developmental gene regulation in the era of genomics

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

The genome-wide dynamics of the binding of Ldb1 complexes during erythroid differentiation

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Paused Pol II coordinates tissue morphogenesis in the Drosophila embryo.

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

Precise maps of RNA polymerase reveal how promoters direct initiation and pausing

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13994

21 January 2018

A global change in RNA polymerase II pausing during the Drosophila midblastula transition

1 reference

https://pubmed.ncbi.nlm.nih.gov/25517091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Compatibility between enhancers and promoters determines the transcriptional specificity of gooseberry and gooseberry neuro in the Drosophila embryo

1 reference

https://pubmed.ncbi.nlm.nih.gov/25517091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metazoan promoters: emerging characteristics and insights into transcriptional regulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/25517091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

hobo enhancer trapping mutagenesis in Drosophila reveals an insertion specificity different from P elements

1 reference

https://pubmed.ncbi.nlm.nih.gov/25517091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In search of the determinants of enhancer-promoter interaction specificity

1 reference

https://pubmed.ncbi.nlm.nih.gov/25517091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-scale functional characterization of Drosophila developmental enhancers in vivo

1 reference

https://pubmed.ncbi.nlm.nih.gov/25517091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1038/NATURE13994

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25517091%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

Dimensions Publication ID

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1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25517091%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25517091%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

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