Genome architecture: from linear organisation of chromatin to the 3D assembly in the nucleus (Q38578607)

4 September 2017

title

Genome architecture: from linear organisation of chromatin to the 3D assembly in the nucleus (English)

1 reference

4 September 2017

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26330112%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

author name string

Joana Sequeira-Mendes

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26330112%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

publication date

2 September 2015

1 reference

4 September 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26330112%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

volume

125

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26330112%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26330112%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

page(s)

455-469

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26330112%20AND%20SRC:MED&resulttype=core&format=json

Regulation of chromatin by histone modifications

1 June 2020

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21 January 2018

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Control of cell identity genes occurs in insulated neighborhoods in mammalian chromosomes

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Interplay between chromatin state, regulator binding, and regulatory motifs in six human cell types

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Mapping and analysis of chromatin state dynamics in nine human cell types

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Epigenetic modifications in plants: an evolutionary perspective

21 January 2018

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Genome-wide Hi-C analyses in wild-type and mutants reveal high-resolution chromatin interactions in Arabidopsis

21 January 2018

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Systematic protein location mapping reveals five principal chromatin types in Drosophila cells

21 January 2018

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Heterochromatin proteins and the control of heterochromatic gene silencing in Arabidopsis

21 January 2018

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An oestrogen-receptor-α-bound human chromatin interactome

21 January 2018

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Characterization of chromosomal architecture in Arabidopsis by chromosome conformation capture

21 January 2018

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Hi-C analysis in Arabidopsis identifies the KNOT, a structure with similarities to the flamenco locus of Drosophila.

21 January 2018

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Partitioning the C. elegans genome by nucleosome modification, occupancy, and positioning

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Histone modifications and a choice of variant: a language that helps the genome express itself

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CTCF-mediated functional chromatin interactome in pluripotent cells

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Histone H1 and its isoforms: contribution to chromatin structure and function

21 January 2018

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Histone modification: cause or cog?

21 January 2018

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Comparative analysis of metazoan chromatin organization

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Chromatin modifications and their function

21 January 2018

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21 January 2018

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Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation

21 January 2018

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Comprehensive mapping of long-range interactions reveals folding principles of the human genome

21 January 2018

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21 January 2018

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Broad chromosomal domains of histone modification patterns in C. elegans

21 January 2018

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Chromatin binding of SRp20 and ASF/SF2 and dissociation from mitotic chromosomes is modulated by histone H3 serine 10 phosphorylation

21 January 2018

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Studying physical chromatin interactions in plants using Chromosome Conformation Capture (3C).

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

21 January 2018

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Spatial partitioning of the regulatory landscape of the X-inactivation centre

21 January 2018

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Heterochromatin protein 1 (HP1a) positively regulates euchromatic gene expression through RNA transcript association and interaction with hnRNPs in Drosophila

21 January 2018

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Three-dimensional genome architecture: players and mechanisms

21 January 2018

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The replication domain model: regulating replicon firing in the context of large-scale chromosome architecture

21 January 2018

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A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping

21 January 2018

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Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin

21 January 2018

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Integrative analysis of 111 reference human epigenomes

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-015-0538-5

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis

21 January 2018

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Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types

21 January 2018

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Histone H3 lysine 9 trimethylation and HP1γ favor inclusion of alternative exons.

21 January 2018

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The long-range interaction landscape of gene promoters

21 January 2018

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The Functional Topography of the Arabidopsis Genome Is Organized in a Reduced Number of Linear Motifs of Chromatin States

21 January 2018

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Three-dimensional folding and functional organization principles of the Drosophila genome

21 January 2018

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Arabidopsis replacement histone variant H3.3 occupies promoters of regulated genes

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-015-0538-5

Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C).

21 January 2018

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Obesity-associated variants within FTO form long-range functional connections with IRX3

21 January 2018

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Transcription factors: from enhancer binding to developmental control

21 January 2018

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CTCF mediates long-range chromatin looping and local histone modification in the beta-globin locus

21 January 2018

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The inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNA.

21 January 2018

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Genome-wide analysis of histone H3.1 and H3.3 variants in Arabidopsis thaliana

21 January 2018

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Patterns of gene action in plant development revealed by enhancer trap and gene trap transposable elements

21 January 2018

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Depletion of the chromatin looping proteins CTCF and cohesin causes chromatin compaction: insight into chromatin folding by polymer modelling

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-015-0538-5

Interactions among Polycomb domains are guided by chromosome architecture

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-015-0538-5

ChIP-seq accurately predicts tissue-specific activity of enhancers

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-015-0538-5

Genome-wide analysis of local chromatin packing in Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0538-5

Spatial genome organization: contrasting views from chromosome conformation capture and fluorescence in situ hybridization

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-015-0538-5

Dynamic deposition of histone variant H3.3 accompanies developmental remodeling of the Arabidopsis transcriptome

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-015-0538-5

Spatial organization of the mouse genome and its role in recurrent chromosomal translocations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0538-5

Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0538-5

Genome-wide profiling of histone H3 lysine 9 acetylation and dimethylation in Arabidopsis reveals correlation between multiple histone marks and gene expression

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-015-0538-5

Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0538-5

Distinct modes of DNA accessibility in plant chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0538-5

Enhancer sequences from Arabidopsis thaliana obtained by library transformation of Nicotiana tabacum

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26330112