Genome-wide Hi-C analyses in wild-type and mutants reveal high-resolution chromatin interactions in Arabidopsis (Q35141855)

6 August 2017

Genome-wide Hi-C analyses in wild-type and mutants reveal high-resolution chromatin interactions in Arabidopsis (English)

1 reference

6 August 2017

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25132175%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Jixian Zhai

4

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4 June 2020

Matteo Pellegrini

5

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4 June 2020

author name string

Suhua Feng

1

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4 June 2020

Shawn J Cokus

2

1 reference

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4 June 2020

Steven E Jacobsen

6

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4 June 2020

publication date

14 August 2014

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6 August 2017

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4 June 2020

volume

55

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4 June 2020

page(s)

694-707

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4 June 2020

issue

5

1 reference

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Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis.

4 June 2020

cites work

1 reference

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Characterization of chromosomal architecture in Arabidopsis by chromosome conformation capture

13 July 2018

1 reference

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High-resolution mapping of the spatial organization of a bacterial chromosome

13 July 2018

1 reference

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A high-resolution map of the three-dimensional chromatin interactome in human cells

13 July 2018

1 reference

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Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data

13 July 2018

1 reference

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The hierarchy of the 3D genome

13 July 2018

1 reference

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Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome.

13 July 2018

1 reference

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A gene loop containing the floral repressor FLC is disrupted in the early phase of vernalization

13 July 2018

1 reference

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Loss of the DNA methyltransferase MET1 Induces H3K9 hypermethylation at PcG target genes and redistribution of H3K27 trimethylation to transposons in Arabidopsis thaliana

13 July 2018

1 reference

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The chromatin insulator CTCF and the emergence of metazoan diversity

13 July 2018

1 reference

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The long-range interaction landscape of gene promoters

13 July 2018

1 reference

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DNA methyltransferases are required to induce heterochromatic re-replication in Arabidopsis

13 July 2018

1 reference

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A map of the cis-regulatory sequences in the mouse genome

13 July 2018

1 reference

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MORC family ATPases required for heterochromatin condensation and gene silencing.

13 July 2018

1 reference

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Topological domains in mammalian genomes identified by analysis of chromatin interactions

13 July 2018

1 reference

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Interphase chromatin organisation in Arabidopsis nuclei: constraints versus randomness.

13 July 2018

1 reference

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Spatial organization of the mouse genome and its role in recurrent chromosomal translocations

13 July 2018

1 reference

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Three-dimensional folding and functional organization principles of the Drosophila genome

13 July 2018

1 reference

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Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation

13 July 2018

1 reference

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Dynamic regulation of H3K27 trimethylation during Arabidopsis differentiation

13 July 2018

1 reference

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A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo

13 July 2018

1 reference

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Epigenetic modifications in plants: an evolutionary perspective

13 July 2018

1 reference

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Mapping of long-range associations throughout the fission yeast genome reveals global genome organization linked to transcriptional regulation

13 July 2018

1 reference

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A three-dimensional model of the yeast genome

13 July 2018

1 reference

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Conservation and divergence of methylation patterning in plants and animals

13 July 2018

1 reference

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Genome-wide evolutionary analysis of eukaryotic DNA methylation.

13 July 2018

1 reference

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Comprehensive mapping of long-range interactions reveals folding principles of the human genome

13 July 2018

1 reference

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Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana

13 July 2018

1 reference

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ATXR5 and ATXR6 are H3K27 monomethyltransferases required for chromatin structure and gene silencing.

13 July 2018

1 reference

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Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana

13 July 2018

1 reference

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Arabidopsis TFL2/LHP1 specifically associates with genes marked by trimethylation of histone H3 lysine 27.

13 July 2018

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Whole-genome analysis of histone H3 lysine 27 trimethylation in Arabidopsis

13 July 2018

1 reference

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Interphase chromosome arrangement in Arabidopsis thaliana is similar in differentiated and meristematic tissues and shows a transient mirror symmetry after nuclear division

13 July 2018

1 reference

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Telomere attachment and clustering during meiosis

13 July 2018

1 reference

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Genome-wide analysis of Polycomb targets in Drosophila melanogaster

13 July 2018

1 reference

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Genome-wide profiling of PRC1 and PRC2 Polycomb chromatin binding in Drosophila melanogaster

13 July 2018

1 reference

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Active genes dynamically colocalize to shared sites of ongoing transcription

13 July 2018

1 reference

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13 July 2018

A bouquet of chromosomes

1 reference

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DNA methylation controls histone H3 lysine 9 methylation and heterochromatin assembly in Arabidopsis.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4347903

Interphase chromosomes in Arabidopsis are organized as well defined chromocenters from which euchromatin loops emanate

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4347903

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4347903

RNA polymerase II forms transcription networks in rye and Arabidopsis nuclei and its amount increases with endopolyploidy.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4347903

Physical clustering of FLC alleles during Polycomb-mediated epigenetic silencing in vernalization

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4347903

Distinct regulation of histone H3 methylation at lysines 27 and 9 by CpG methylation in Arabidopsis

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4347903

Disruption of the plant gene MOM releases transcriptional silencing of methylated genes.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4347903

Two means of transcriptional reactivation within heterochromatin

27 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25132175

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.MOLCEL.2014.07.008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25132175%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25132175%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

1 reference