Unravelling the means to an end: RNA polymerase II transcription termination. (Q37864536)

PubMed ID

21487437

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21487437%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

review article

1 reference

title

Unravelling the means to an end: RNA polymerase II transcription termination (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6995273&resulttype=core&format=json

14 May 2020

1

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14 May 2020

author name string

Erika L Pearson

series ordinal

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6995273&resulttype=core&format=json

14 May 2020

Claire Moore

series ordinal

3

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14 May 2020

publication date

13 April 2011

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PubMed ID

21487437

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21487437%20AND%20SRC:MED&resulttype=core&format=json

Nature Reviews Molecular Cell Biology

28 January 2020

published in

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6995273&resulttype=core&format=json

14 May 2020

volume

12

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14 May 2020

issue

5

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14 May 2020

page(s)

283-294

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6995273&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1038/nrm3098

14 May 2020

exact match

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cites work

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The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II.

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Human 5' --> 3' exonuclease Xrn2 promotes transcription termination at co-transcriptional cleavage sites

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The role of Rat1 in coupling mRNA 3'-end processing to transcription termination: implications for a unified allosteric-torpedo model

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Cooperative interaction of transcription termination factors with the RNA polymerase II C-terminal domain

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Autocatalytic RNA cleavage in the human beta-globin pre-mRNA promotes transcription termination

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Budding yeast RNA polymerases I and II employ parallel mechanisms of transcriptional termination

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A novel tandem reporter quantifies RNA polymerase II termination in mammalian cells

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Serine-7 of the RNA polymerase II CTD is specifically required for snRNA gene expression

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A subset of Drosophila integrator proteins is essential for efficient U7 snRNA and spliceosomal snRNA 3'-end formation

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Integrator, a multiprotein mediator of small nuclear RNA processing, associates with the C-terminal repeat of RNA polymerase II

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A CPSF-73 homologue is required for cell cycle progression but not cell growth and interacts with a protein having features of CPSF-100

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Chromatin structure is implicated in "late" elongation checkpoints on the U2 snRNA and beta-actin genes

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Coupled RNA processing and transcription of intergenic primary microRNAs

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Torpedo Nuclease Rat1 Is Insufficient to Terminate RNA Polymerase II in Vitro

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Structure and function of the 5′→3′ exoribonuclease Rat1 and its activating partner Rai1

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An allosteric mechanism of Rho-dependent transcription termination

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Escherichia coli rho factor induces release of yeast RNA polymerase II but not polymerase I or III.

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nusA protein of Escherichia coli is an efficient transcription termination factor for certain terminator sites

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Requirement for E. coli NusG protein in factor-dependent transcription termination

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Ribosomal protein S4 is a transcription factor with properties remarkably similar to NusA, a protein involved in both non-ribosomal and ribosomal RNA antitermination.

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A transcription antiterminator constructs a NusA-dependent shield to the emerging transcript

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21 January 2018

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The bacteriophage lambda Q antiterminator protein contacts the beta-flap domain of RNA polymerase.

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Two Structurally Independent Domains of E. coli NusG Create Regulatory Plasticity via Distinct Interactions with RNA Polymerase and Regulators

21 January 2018

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Genetic assays to define and characterize protein-protein interactions involved in gene regulation

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Functional specialization of transcription elongation factors

21 January 2018

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Functional regions of the N-terminal domain of the antiterminator RfaH.

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Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription

21 January 2018

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Functional interaction of yeast pre-mRNA 3' end processing factors with RNA polymerase II.

21 January 2018

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Phosphorylation of serine 2 within the RNA polymerase II C-terminal domain couples transcription and 3' end processing

21 January 2018

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Transcribing RNA polymerase II is phosphorylated at CTD residue serine-7.

21 January 2018

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Poly(A) signals located near the 5' end of genes are silenced by a general mechanism that prevents premature 3'-end processing

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The Nrd1–Nab3–Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain

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Chemical-genomic dissection of the CTD code.

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Distinct pathways for snoRNA and mRNA termination

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The integrator complex recognizes a new double mark on the RNA polymerase II carboxyl-terminal domain

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The Ess1 prolyl isomerase is required for transcription termination of small noncoding RNAs via the Nrd1 pathway

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A role for chromatin remodeling in transcriptional termination by RNA polymerase II.

21 January 2018

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Biased chromatin signatures around polyadenylation sites and exons

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Gene silencing: small RNAs control RNA polymerase II elongation.

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An ending is a new beginning: transcription termination supports re-initiation.

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CTD-dependent dismantling of the RNA polymerase II elongation complex by the pre-mRNA 3'-end processing factor, Pcf11.

21 January 2018

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Yhh1p/Cft1p directly links poly(A) site recognition and RNA polymerase II transcription termination

21 January 2018

1 reference

The role of the putative 3' end processing endonuclease Ysh1p in mRNA and snoRNA synthesis

21 January 2018

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21 January 2018

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The Glc7 phosphatase subunit of the cleavage and polyadenylation factor is essential for transcription termination on snoRNA genes.

21 January 2018

1 reference

The essential N terminus of the Pta1 scaffold protein is required for snoRNA transcription termination and Ssu72 function but is dispensable for pre-mRNA 3'-end processing.

21 January 2018

1 reference

Ssu72 is a phosphatase essential for transcription termination of snoRNAs and specific mRNAs in yeast

21 January 2018

1 reference

Ssu72 protein mediates both poly(A)-coupled and poly(A)-independent termination of RNA polymerase II transcription

21 January 2018

1 reference

Saccharomyces cerevisiae RAI1 (YGL246c) is homologous to human DOM3Z and encodes a protein that binds the nuclear exoribonuclease Rat1p

21 January 2018

1 reference

The multifunctional protein p54nrb/PSF recruits the exonuclease XRN2 to facilitate pre-mRNA 3' processing and transcription termination

21 January 2018

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Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae.

21 January 2018

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The C-terminal domain of RNA polymerase II couples mRNA processing to transcription

21 January 2018

1 reference

cis- and trans-Acting determinants of transcription termination by yeast RNA polymerase II

21 January 2018

1 reference

The Paf1 complex has functions independent of actively transcribing RNA polymerase II.

21 January 2018

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A Requirement for the Saccharomyces cerevisiae Paf1 complex in snoRNA 3' end formation

21 January 2018

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The long and short of RNAs

21 January 2018

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21 January 2018

The meaning of pausing

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Transcription attenuation: a highly conserved regulatory strategy used by bacteria

31 March 2020

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Transcription attenuation in bacteria: theme and variations

31 March 2020

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Transcriptional ShortCUTs

31 March 2020

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The 8-nucleotide-long RNA:DNA hybrid is a primary stability determinant of the RNA polymerase II elongation complex

31 March 2020

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Terminating transcription in yeast: whether to be a 'nerd' or a 'rat'

31 March 2020

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Pac1 endonuclease and Dhp1p 5'-->3' exonuclease are required for U3 snoRNA termination in Schizosaccharomyces pombe

31 March 2020

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A functional mRNA polyadenylation signal is required for transcription termination by RNA polymerase II

31 March 2020

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Phosphorylation of the RNA polymerase II C-terminal domain dictates transcription termination choice

31 March 2020

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Control of eukaryotic gene expression: gene loops and transcriptional memory.

31 March 2020

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Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS

31 March 2020

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Regulation of yeast NRD1 expression by premature transcription termination

31 March 2020

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31 March 2020

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12 December 2020

Host factor requirements for processive antitermination of transcription and suppression of pausing by the N protein of bacteriophage lambda

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12 December 2020

Alpha-thalassaemia caused by a poly(A) site mutation reveals that transcriptional termination is linked to 3' end processing in the human alpha 2 globin gene

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12 December 2020

Rho-dependent transcription termination: more questions than answers

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12 December 2020

Identifiers

DOI

10.1038/NRM3098

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6995273&resulttype=core&format=json

14 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6995273&resulttype=core&format=json

14 May 2020

1 reference