Uniform transitions of the general RNA polymerase II transcription complex (Q27931804)

PubMed publication ID

20818391

1 December 2016

title

Uniform transitions of the general RNA polymerase II transcription complex (English)

1 reference

PubMed publication ID

1 December 2016

1 reference

GOA release 2020-03-11

Elf1p YKL160W

1 reference

Chromatin-remodeling histone chaperone SPT6 YGR116W

GOA release 2020-03-11

1 reference

GOA release 2020-03-11

author

Johannes Söding

5

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Andreas Mayer

object named as

Andreas Mayer

1

0 references

Patrick Cramer

6

object named as

Patrick Cramer

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author name string

Michael Lidschreiber

2

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Matthias Siebert

3

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Kristin Leike

Nature Structural & Molecular Biology

4

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publication date

October 2010

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language of work or name

English

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published in

1 reference

PubMed publication ID

20818391

Exchange of RNA polymerase II initiation and elongation factors during gene expression in vivo

1 December 2016

volume

17

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issue

10

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page(s)

1272-8

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cites work

1 reference

Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription

20 April 2017

1 reference

The transcriptional landscape of the yeast genome defined by RNA sequencing

20 April 2017

1 reference

Structure and in vivo requirement of the yeast Spt6 SH2 domain

20 April 2017

1 reference

RNA polymerase II-TFIIB structure and mechanism of transcription initiation

20 April 2017

1 reference

A highly purified RNA polymerase II elongation control system

20 April 2017

1 reference

Phosphorylation of the yeast Rpb1 C-terminal domain at serines 2, 5, and 7.

20 April 2017

1 reference

TFIIH kinase places bivalent marks on the carboxy-terminal domain of RNA polymerase II.

20 April 2017

1 reference

Phosphorylation of the RNA polymerase II carboxy-terminal domain by the Bur1 cyclin-dependent kinase

20 April 2017

1 reference

The Spt6 SH2 domain binds Ser2-P RNAPII to direct Iws1-dependent mRNA splicing and export

20 April 2017

1 reference

RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo

20 April 2017

1 reference

Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

20 April 2017

1 reference

c-Myc regulates transcriptional pause release

20 April 2017

1 reference

Spt4/5 stimulates transcription elongation through the RNA polymerase clamp coiled-coil motif

20 April 2017

1 reference

Dual roles for Spt5 in pre-mRNA processing and transcription elongation revealed by identification of Spt5-associated proteins

20 April 2017

1 reference

RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach

20 April 2017

1 reference

Identification and characterization of Elf1, a conserved transcription elongation factor in Saccharomyces cerevisiae

20 April 2017

1 reference

Phosphorylation of the Pol II CTD by KIN28 enhances BUR1/BUR2 recruitment and Ser2 CTD phosphorylation near promoters

20 April 2017

1 reference

Control of transcriptional elongation and cotranscriptional histone modification by the yeast BUR kinase substrate Spt5.

20 April 2017

1 reference

BUR kinase selectively regulates H3 K4 trimethylation and H2B ubiquitylation through recruitment of the PAF elongation complex

20 April 2017

1 reference

The FACT Spt16 “peptidase” domain is a histone H3–H4 binding module

20 April 2017

1 reference

FACT facilitates transcription-dependent nucleosome alteration

20 April 2017

1 reference

Bur1 kinase is required for efficient transcription elongation by RNA polymerase II.

20 April 2017

1 reference

Interaction between transcription elongation factors and mRNA 3'-end formation at the Saccharomyces cerevisiae GAL10-GAL7 locus.

20 April 2017

1 reference

Transcription elongation factors repress transcription initiation from cryptic sites.

20 April 2017

1 reference

Progression through the RNA polymerase II CTD cycle

20 April 2017

1 reference

Bidirectional promoters generate pervasive transcription in yeast

20 April 2017

1 reference

Transitions in RNA polymerase II elongation complexes at the 3' ends of genes

20 April 2017

1 reference

RNA polymerase II elongation through chromatin

20 April 2017

1 reference

A unified theory of gene expression

21 January 2018

1 reference

Dynamic association of capping enzymes with transcribing RNA polymerase II

21 January 2018

1 reference

"Cotranscriptionality": the transcription elongation complex as a nexus for nuclear transactions

21 January 2018

1 reference

A structural perspective of CTD function

21 January 2018

1 reference

A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome

21 January 2018

1 reference

A high-resolution map of transcription in the yeast genome

21 January 2018

1 reference

Genome-associated RNA polymerase II includes the dissociable Rpb4/7 subcomplex.

21 January 2018

1 reference

Transcribing RNA polymerase II is phosphorylated at CTD residue serine-7.

21 January 2018

1 reference

RNA polymerase II C-terminal heptarepeat domain Ser-7 phosphorylation is established in a mediator-dependent fashion

21 January 2018

1 reference

Phosphorylation of the transcription elongation factor Spt5 by yeast Bur1 kinase stimulates recruitment of the PAF complex.

21 January 2018

1 reference

Multiple C-terminal lysine residues target p53 for ubiquitin-proteasome-mediated degradation

21 January 2018

1 reference

Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae.

21 January 2018

1 reference

Global analysis of short RNAs reveals widespread promoter-proximal stalling and arrest of Pol II in Drosophila

21 January 2018

1 reference

Nucleosome positioning and gene regulation: advances through genomics

21 January 2018

1 reference

Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit

21 January 2018

1 reference

The positions of TFIIF and TFIIE in the RNA polymerase II transcription preinitiation complex.

21 January 2018

1 reference

Core structure of the yeast spt4-spt5 complex: a conserved module for regulation of transcription elongation

21 January 2018

1 reference

Ctk1 promotes dissociation of basal transcription factors from elongating RNA polymerase II

21 January 2018

1 reference

RNA polymerase II pauses and associates with pre-mRNA processing factors at both ends of genes.

21 January 2018

1 reference

Phosphorylation of serine 2 within the RNA polymerase II C-terminal domain couples transcription and 3' end processing

21 January 2018

1 reference

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting

21 January 2018

1 reference

Genome-scale identification of nucleosome positions in S. cerevisiae

21 January 2018

1 reference

Extensive chromatin fragmentation improves enrichment of protein binding sites in chromatin immunoprecipitation experiments

21 January 2018

1 reference

Quantitative analysis of in vivo initiator selection by yeast RNA polymerase II supports a scanning model

21 January 2018

1 reference

Kin28, the TFIIH-associated carboxy-terminal domain kinase, facilitates the recruitment of mRNA processing machinery to RNA polymerase II.

31 March 2020

1 reference

RNA polymerase II and the integration of nuclear events

31 March 2020

1 reference

https://pubmed.ncbi.nlm.nih.gov/20818391