Organization and function of APT, a subcomplex of the yeast cleavage and polyadenylation factor involved in the formation of mRNA and small nucleolar RNA 3'-ends (Q27933144)

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English	Organization and function of APT, a subcomplex of the yeast cleavage and polyadenylation factor involved in the formation of mRNA and small nucleolar RNA 3'-ends	scientific article

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scholarly article

1 reference

1 December 2016

Organization and function of APT, a subcomplex of the yeast cleavage and polyadenylation factor involved in the formation of mRNA and small nucleolar RNA 3'-ends (English)

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1 December 2016

Jack Greenblatt

10

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Stephen Buratowski

8

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author name string

Eduard Nedea

1

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Xiaoyuan He

2

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Minkyu Kim

3

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Jeff Pootoolal

4

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Guoqing Zhong

5

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Veronica Canadien

6

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Timothy Hughes

7

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Claire L Moore

9

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language of work or name

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publication date

29 August 2003

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Journal of Biological Chemistry

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1 December 2016

278

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33000-10

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35

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RNA processing in vitro produces mature 3' ends of a variety of Saccharomyces cerevisiae mRNAs

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Separation of factors required for cleavage and polyadenylation of yeast pre-mRNA

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

A multisubunit 3' end processing factor from yeast containing poly(A) polymerase and homologues of the subunits of mammalian cleavage and polyadenylation specificity factor

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

REF2 encodes an RNA-binding protein directly involved in yeast mRNA 3'-end formation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Genomic detection of new yeast pre-mRNA 3'-end-processing signals

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Statistical analysis of yeast genomic downstream sequences reveals putative polyadenylation signals

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Recognition of polyadenylation sites in yeast pre-mRNAs by cleavage and polyadenylation factor

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

mRNA capping enzyme is recruited to the transcription complex by phosphorylation of the RNA polymerase II carboxy-terminal domain

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

The C-terminal domain of RNA polymerase II couples mRNA processing to transcription

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Functional interaction of yeast pre-mRNA 3' end processing factors with RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Transcription terminates near the poly(A) site in the CYC1 gene of the yeast Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Coupling termination of transcription to messenger RNA maturation in yeast.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Balancing transcriptional interference and initiation on the GAL7 promoter of Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

A role for SSU72 in balancing RNA polymerase II transcription elongation and termination

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Yhh1p/Cft1p directly links poly(A) site recognition and RNA polymerase II transcription termination

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Kin28, the TFIIH-associated carboxy-terminal domain kinase, facilitates the recruitment of mRNA processing machinery to RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Evolutionarily conserved interaction between CstF-64 and PC4 links transcription, polyadenylation, and termination

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

TFIID-specific yeast TAF40 is essential for the majority of RNA polymerase II-mediated transcription in vivo

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

A generic protein purification method for protein complex characterization and proteome exploration

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

The tandem affinity purification (TAP) method: a general procedure of protein complex purification

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Fip1 regulates the activity of Poly(A) polymerase through multiple interactions

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Five subunits are required for reconstitution of the cleavage and polyadenylation activities of Saccharomyces cerevisiae cleavage factor I.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Preparation of high molecular weight RNA

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

RNA-binding protein Nrd1 directs poly(A)-independent 3'-end formation of RNA polymerase II transcripts

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Point mutations upstream of the yeast ADH2 poly(A) site significantly reduce the efficiency of 3'-end formation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Termination and pausing of RNA polymerase II downstream of yeast polyadenylation sites

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Laser desorption ionization of proteins with molecular masses exceeding 10,000 daltons

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Identifying proteins from two-dimensional gels by molecular mass searching of peptide fragments in protein sequence databases

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

The WD-repeat protein pfs2p bridges two essential factors within the yeast pre-mRNA 3'-end-processing complex

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Functional organization of the yeast proteome by systematic analysis of protein complexes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Novel interactions of Saccharomyces cerevisiae type 1 protein phosphatase identified by single-step affinity purification and mass spectrometry.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Functional interactions between the transcription and mRNA 3′ end processing machineries mediated by Ssu72 and Sub1

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Pti1p and Ref2p found in association with the mRNA 3' end formation complex direct snoRNA maturation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Synthetic enhancement of a TFIIB defect by a mutation in SSU72, an essential yeast gene encoding a novel protein that affects transcription start site selection in vivo

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Functional interaction between Ssu72 and the Rpb2 subunit of RNA polymerase II in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

The yeast proteome database (YPD) and Caenorhabditis elegans proteome database (WormPD): comprehensive resources for the organization and comparison of model organism protein information

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

The RNA polymerase II CTD kinase CTDK-I affects pre-mRNA 3' cleavage/polyadenylation through the processing component Pti1p

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Protein phosphatase type 1 interacts with proteins required for meiosis and other cellular processes in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Mpe1, a zinc knuckle protein, is an essential component of yeast cleavage and polyadenylation factor required for the cleavage and polyadenylation of mRNA.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

COMPASS: a complex of proteins associated with a trithorax-related SET domain protein

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

The Saccharomyces cerevisiae Set1 complex includes an Ash2 homologue and methylates histone 3 lysine 4

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

The WD repeat: a common architecture for diverse functions

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

A protein phosphatase-1-binding motif identified by the panning of a random peptide display library

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Activated transcription independent of the RNA polymerase II holoenzyme in budding yeast

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Yeast snoRNA accumulation relies on a cleavage-dependent/polyadenylation-independent 3'-processing apparatus

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Functional analysis of yeast snoRNA and snRNA 3'-end formation mediated by uncoupling of cleavage and polyadenylation.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Probabilistic prediction of Saccharomyces cerevisiae mRNA 3'-processing sites

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

A yeast transcriptional stimulatory protein similar to human PC4.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Characterization of nuclear polyadenylated RNA-binding proteins in Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Control of pre-mRNA accumulation by the essential yeast protein Nrd1 requires high-affinity transcript binding and a domain implicated in RNA polymerase II association

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Transcription factor TFIID recruits factor CPSF for formation of 3' end of mRNA

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

An unusual eukaryotic protein phosphatase required for transcription by RNA polymerase II and CTD dephosphorylation in S. cerevisiae.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Opposing effects of Ctk1 kinase and Fcp1 phosphatase at Ser 2 of the RNA polymerase II C-terminal domain

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Posttranslational phosphorylation and ubiquitination of the Saccharomyces cerevisiae Poly(A) polymerase at the S/G(2) stage of the cell cycle

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

The mRNA transcription/processing factor Ssu72 is a potential tyrosine phosphatase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Ssu72 is a phosphatase essential for transcription termination of snoRNAs and specific mRNAs in yeast

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Transcriptional antitermination

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Cleavage factor II of Saccharomyces cerevisiae contains homologues to subunits of the mammalian Cleavage/ polyadenylation specificity factor and exhibits sequence-specific, ATP-dependent interaction with precursor RNA.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Human general transcription factor IIH phosphorylates the C-terminal domain of RNA polymerase II

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Purification of the Saccharomyces cerevisiae cleavage/polyadenylation factor I. Separation into two components that are required for both cleavage and polyadenylation of mRNA 3' ends

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Transcriptional termination factors for RNA polymerase II in yeast

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

A rapid permeabilization procedure for accurate quantitative determination of beta-galactosidase activity in yeast cells

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

RNA14 and RNA15 proteins as components of a yeast pre-mRNA 3'-end processing factor

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M304454200

21 January 2018

Identifiers

10.1074/JBC.M304454200

0 references

1 reference

1 December 2016

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