Molecular evolutionary and structural analysis of the cytosolic DNA sensor cGAS and STING (Q33983673)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24981511%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

title

Molecular evolutionary and structural analysis of the cytosolic DNA sensor cGAS and STING (English)

1 reference

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21 March 2020

1 reference

7

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21 March 2020

author name string

Xiaomei Wu

1

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21 March 2020

Fei-Hua Wu

2

1 reference

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21 March 2020

Xiaoqiang Wang

3

1 reference

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21 March 2020

Lilin Wang

4

1 reference

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21 March 2020

James N Siedow

5

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21 March 2020

Weiguo Zhang

6

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21 March 2020

language of work or name

English

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publication date

30 June 2014

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21 March 2020

published in

Nucleic Acids Research

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21 March 2020

volume

42

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21 March 2020

issue

13

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21 March 2020

page(s)

8243-8257

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Creative Commons Attribution-NonCommercial 3.0 Unported

21 March 2020

copyright license

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Innate immune sensing and signaling of cytosolic nucleic acids

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The Cytosolic DNA Sensor cGAS Forms an Oligomeric Complex with DNA and Undergoes Switch-like Conformational Changes in the Activation Loop

5 July 2018

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The genome of the ctenophore Mnemiopsis leidyi and its implications for cell type evolution

5 July 2018

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Cyclic GMP-AMP Synthase Is Activated by Double-Stranded DNA-Induced Oligomerization

5 July 2018

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Cyclic di-nucleotide signaling enters the eukaryote domain.

5 July 2018

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Cyclic dinucleotides trigger ULK1 (ATG1) phosphorylation of STING to prevent sustained innate immune signaling

5 July 2018

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Structural and Functional Analyses of DNA-Sensing and Immune Activation by Human cGAS

5 July 2018

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Cyclic dinucleotides and the innate immune response

5 July 2018

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Pivotal roles of cGAS-cGAMP signaling in antiviral defense and immune adjuvant effects

5 July 2018

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Structure-Function Analysis of STING Activation by c[G(2′,5′)pA(3′,5′)p] and Targeting by Antiviral DMXAA

5 July 2018

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Cyclic GMP-AMP Containing Mixed Phosphodiester Linkages Is An Endogenous High-Affinity Ligand for STING

5 July 2018

1 reference

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Structural mechanism of cytosolic DNA sensing by cGAS

5 July 2018

1 reference

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cGAS produces a 2'-5'-linked cyclic dinucleotide second messenger that activates STING.

5 July 2018

1 reference

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The innate immune DNA sensor cGAS produces a noncanonical cyclic dinucleotide that activates human STING

5 July 2018

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Structure of Human cGAS Reveals a Conserved Family of Second-Messenger Enzymes in Innate Immunity

5 July 2018

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Cyclic [G(2′,5′)pA(3′,5′)p] Is the Metazoan Second Messenger Produced by DNA-Activated Cyclic GMP-AMP Synthase

5 July 2018

1 reference

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Structural basis for cytosolic double-stranded RNA surveillance by human oligoadenylate synthetase 1

5 July 2018

1 reference

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Cyclic GMP-AMP synthase is a cytosolic DNA sensor that activates the type I interferon pathway

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Cyclic GMP-AMP is an endogenous second messenger in innate immune signaling by cytosolic DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

STING and the innate immune response to nucleic acids in the cytosol

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Both STING and MAVS fish orthologs contribute to the induction of interferon mediated by RIG-I

5 July 2018

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Evolution of innate and adaptive immune systems in jawless vertebrates

5 July 2018

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Crystal structures of STING protein reveal basis for recognition of cyclic di-GMP

5 July 2018

1 reference

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The structural basis for the sensing and binding of cyclic di-GMP by STING

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Structure of STING bound to cyclic di-GMP reveals the mechanism of cyclic dinucleotide recognition by the immune system

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Cyclic di-GMP sensing via the innate immune signaling protein STING

5 July 2018

1 reference

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Estimating divergence dates and substitution rates in the Drosophila phylogeny

5 July 2018

1 reference

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Evolutionary diversity of the mitochondrial calcium uniporter

5 July 2018

1 reference

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Structural Analysis of the STING Adaptor Protein Reveals a Hydrophobic Dimer Interface and Mode of Cyclic di-GMP Binding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Coordinated regulation of accessory genetic elements produces cyclic di-nucleotides for V. cholerae virulence

5 July 2018

1 reference

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NF-κB: where did it come from and why?

5 July 2018

1 reference

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STING specifies IRF3 phosphorylation by TBK1 in the cytosolic DNA signaling pathway

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

STING is a direct innate immune sensor of cyclic di-GMP

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Cytosolic DNA sensors regulating type I interferon induction.

5 July 2018

1 reference

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The helicase DDX41 senses intracellular DNA mediated by the adaptor STING in dendritic cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

IFI16 is an innate immune sensor for intracellular DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

The Newick utilities: high-throughput phylogenetic tree processing in the UNIX shell

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Global characterization of interferon regulatory factor (IRF) genes in vertebrates: glimpse of the diversification in evolution

5 July 2018

1 reference

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Molecular cloning and functional characterization of porcine stimulator of interferon genes (STING).

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Evolution of host innate defence: insights from Caenorhabditis elegans and primitive invertebrates

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Comprehensive classification of nucleotidyltransferase fold proteins: identification of novel families and their representatives in human

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Dynamic evolution of immune system regulators: the history of the interferon regulatory factor family

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

RNA polymerase III detects cytosolic DNA and induces type I interferons through the RIG-I pathway

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

RIG-I-dependent sensing of poly(dA:dT) through the induction of an RNA polymerase III-transcribed RNA intermediate

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

ERIS, an endoplasmic reticulum IFN stimulator, activates innate immune signaling through dimerization

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

An orthogonal proteomic-genomic screen identifies AIM2 as a cytoplasmic DNA sensor for the inflammasome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

AIM2 activates the inflammasome and cell death in response to cytoplasmic DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

AIM2 recognizes cytosolic dsDNA and forms a caspase-1-activating inflammasome with ASC

5 July 2018

1 reference

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Jalview Version 2--a multiple sequence alignment editor and analysis workbench

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

The adaptor protein MITA links virus-sensing receptors to IRF3 transcription factor activation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

STING is an endoplasmic reticulum adaptor that facilitates innate immune signalling

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

MPYS, a novel membrane tetraspanner, is associated with major histocompatibility complex class II and mediates transduction of apoptotic signals

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

The Jpred 3 secondary structure prediction server

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Broad phylogenomic sampling improves resolution of the animal tree of life

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

PROMALS3D: a tool for multiple protein sequence and structure alignments

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

DAI (DLM-1/ZBP1) is a cytosolic DNA sensor and an activator of innate immune response

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Expression and characterization of recombinant 2',5'-oligoadenylate synthetase from the marine sponge Geodia cydonium

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Toward Automatic Reconstruction of a Highly Resolved Tree of Life

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

From genomics to chemical genomics: new developments in KEGG

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Coot: model-building tools for molecular graphics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

A combined transmembrane topology and signal peptide prediction method

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Evolution of the interleukins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

MUSCLE: multiple sequence alignment with high accuracy and high throughput

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Modeller: generation and refinement of homology-based protein structure models

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Different evolutionary patterns between young duplicate genes in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

The HMMTOP transmembrane topology prediction server

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Ab initio gene finding in Drosophila genomic DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Two murine and human homologs of mab-21, a cell fate determination gene involved in Caenorhabditis elegans neural development

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

PAML: a program package for phylogenetic analysis by maximum likelihood

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

cDNA cloning of a human homologue of the Caenorhabditis elegans cell fate-determining gene mab-21: expression, chromosomal localization and analysis of a highly polymorphic (CAG)n trinucleotide repeat

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

The mab-21 gene of Caenorhabditis elegans encodes a novel protein required for choice of alternate cell fates.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117786

Immunology. Sensing the dark side of DNA.

5 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU569

Fish MITA serves as a mediator for distinct fish IFN gene activation dependent on IRF3 or IRF7.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU569

Phybase: an R package for species tree analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU569

Estimating species phylogenies using coalescence times among sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU569

Evolution of the 2'-5'-oligoadenylate synthetase family in eukaryotes and bacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU569

21 January 2018

Identifiers

DOI

10.1093/NAR/GKU569

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24981511%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24981511%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24981511%20AND%20SRC:MED&resulttype=core&format=json