Jalview Version 2--a multiple sequence alignment editor and analysis workbench (Q24655519)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

title

Jalview Version 2--a multiple sequence alignment editor and analysis workbench (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

computational mathematics

20 January 2020

main subject

0 references

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Geoffrey J. Barton

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

David Martin

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

author name string

Andrew M Waterhouse

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Michèle Clamp

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

publication date

16 January 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

language of work or name

English

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number of pages

3

1 reference

inferred from page(s)

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

volume

25

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

issue

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

page(s)

1189-1191

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

The Pfam protein families database

20 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

Recent evolutions of multiple sequence alignment algorithms

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

SOAP-based services provided by the European Bioinformatics Institute

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

MAFFT version 5: improvement in accuracy of multiple sequence alignment

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

MUSCLE: multiple sequence alignment with high accuracy and high throughput

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

The distributed annotation system

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

The Jalview Java alignment editor

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

ALSCRIPT: a tool to format multiple sequence alignments

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

UTOPIA-User-Friendly Tools for Operating Informatics Applications

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

CINEMA--a novel colour INteractive editor for multiple alignments

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

The Jpred 3 secondary structure prediction server

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

TarO: a target optimisation system for structural biology

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

Integrating sequence and structural biology with DAS

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

MyHits: improvements to an interactive resource for analyzing protein sequences

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

MACSIMS: multiple alignment of complete sequences information management system

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

Protein family annotation in a multiple alignment viewer.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

SRS: information retrieval system for molecular biology data banks

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

MALIGNED: a multiple sequence alignment editor

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

HOMED: a homologous sequence editor.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

Analysis and comparison of benchmarks for multiple sequence alignment

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

RnaViz 2: an improved representation of RNA secondary structure.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2672624

DCSE, an interactive tool for sequence alignment and secondary structure research

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19151095

12 December 2020

inferred from PubMed ID database lookup

ModView, visualization of multiple protein sequences and structures

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19151095

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/BIOINFORMATICS/BTP033

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

journals/bioinformatics/WaterhousePMCB09

20 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

release_dzx4jzydx5fyrkqsc5yxdni5re

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/dzx4jzydx5fyrkqsc5yxdni5re

24 November 2022

mapped directly with Wikidata item

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19151095%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

PubMed publication ID

19151095

2 references