Label-free quantification in ion mobility-enhanced data-independent acquisition proteomics. (Q31062688)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27010757%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

title

Label-free quantification in ion mobility-enhanced data-independent acquisition proteomics (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27010757%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27010757%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

Pedro Navarro

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27010757%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

Stefan Tenzer

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27010757%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

author name string

Ute Distler

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27010757%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

publication date

24 March 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27010757%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27010757%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

volume

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27010757%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27010757%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

page(s)

795-812

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27010757%20AND%20SRC:MED&resulttype=core&format=json

Proteomics: a pragmatic perspective

30 March 2020

cites work

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Applying mass spectrometry-based proteomics to genetics, genomics and network biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Mass spectrometry-based proteomics and network biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Less label, more free: approaches in label-free quantitative mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

To label or not to label: applications of quantitative proteomics in neuroscience research

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Tools for label-free peptide quantification

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

An insight into iTRAQ: where do we stand now?

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Quantitative mass spectrometry in proteomics: critical review update from 2007 to the present

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Biomedical applications of ion mobility-enhanced data-independent acquisition-based label-free quantitative proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Qualitative and quantitative characterization of plasma proteins when incorporating traveling wave ion mobility into a liquid chromatography-mass spectrometry workflow for biomarker discovery: use of product ion quantitation as an alternative data a

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Whole cell, label free protein quantitation with data independent acquisition: quantitation at the MS2 level.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Multiplexed and data-independent tandem mass spectrometry for global proteome profiling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

A novel precursor ion discovery method on a hybrid quadrupole orthogonal acceleration time-of-flight (Q-TOF) mass spectrometer for studying protein phosphorylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Database searching and accounting of multiplexed precursor and product ion spectra from the data independent analysis of simple and complex peptide mixtures

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Developing liquid chromatography ion mobility mass spectometry techniques

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

An LC-IMS-MS platform providing increased dynamic range for high-throughput proteomic studies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Characterizing ion mobility-mass spectrometry conformation space for the analysis of complex biological samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Using ion purity scores for enhancing quantitative accuracy and precision in complex proteomics samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Drift time-specific collision energies enable deep-coverage data-independent acquisition proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Effects of traveling wave ion mobility separation on data independent acquisition in proteomics studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Global quantification of mammalian gene expression control

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

A software toolkit and interface for performing stable isotope labeling and top3 quantification using Progenesis LC-MS

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Implementation and evaluation of relative and absolute quantification in shotgun proteomics with label-free methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Critical assessment of proteome-wide label-free absolute abundance estimation strategies

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Absolute quantification of proteins by LCMSE: a virtue of parallel MS acquisition

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

In-depth evaluation of software tools for data-independent acquisition based label-free quantification

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Quantitative profiling of the protein coronas that form around nanoparticles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

In-depth protein profiling of the postsynaptic density from mouse hippocampus using data-independent acquisition proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

XLS (c9orf142) is a new component of mammalian DNA double-stranded break repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

A proteomics performance standard to support measurement quality in proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Analysis of protein mixtures from whole-cell extracts by single-run nanoLC-MS/MS using ultralong gradients.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Optimized fast and sensitive acquisition methods for shotgun proteomics on a quadrupole orbitrap mass spectrometer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

More than 100,000 detectable peptide species elute in single shotgun proteomics runs but the majority is inaccessible to data-dependent LC-MS/MS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Quality assessment for clinical proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

qcML: an exchange format for quality control metrics from mass spectrometry experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Sources of technical variability in quantitative LC-MS proteomics: human brain tissue sample analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Proteomic differences between male and female anterior cruciate ligament and patellar tendon

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Longitudinal study of differential protein expression in an Alzheimer's mouse model lacking inducible nitric oxide synthase

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Universal sample preparation method for proteome analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Sample preparation and digestion for proteomic analyses using spin filters

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Peak capacity optimization of peptide separations in reversed-phase gradient elution chromatography: fixed column format

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

DMSO enhances electrospray response, boosting sensitivity of proteomic experiments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

One-hour proteome analysis in yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Charge state coalescence during electrospray ionization improves peptide identification by tandem mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Improving qualitative and quantitative performance for MS(E)-based label-free proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Retention time alignment algorithms for LC/MS data must consider non-linear shifts

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Increasing Confidence of LC-MS Identifications by Utilizing Ion Mobility Spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Interpretation of shotgun proteomic data: the protein inference problem

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

OpenMS - an open-source software framework for mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Chemically etched open tubular and monolithic emitters for nanoelectrospray ionization mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

A systems level analysis reveals transcriptomic and proteomic complexity in Ixodes ricinus midgut and salivary glands during early attachment and feeding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Digestion and depletion of abundant proteins improves proteomic coverage

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

The importance of the digest: Proteolysis and absolute quantification in proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Quantitative proteomic analysis by accurate mass retention time pairs

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

An accurate mass tag strategy for quantitative and high-throughput proteome measurements

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2016.042

Label-free quantitative proteomics trends for protein-protein interactions

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27010757

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NPROT.2016.042

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27010757%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

30 March 2020

1022542635

0 references

Fatcat ID

release_2p7m7odidjcunowp4ufj46id3m

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/2p7m7odidjcunowp4ufj46id3m

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference