Meet me halfway: when genomics meets structural bioinformatics (Q30400158)

21 June 2017

Meet me halfway: when genomics meets structural bioinformatics (English)

1 reference

21 June 2017

0 references

1 reference

Sungsam Gong

1

0 references

Tom Blundell

series ordinal

4

object named as

Tom L Blundell

1 reference

PubMed ID

21350909

21 June 2017

Catherine Louise Worth

series ordinal

2

object named as

Catherine L Worth

1 reference

21 June 2017

Tammy M K Cheng

3

1 reference

PubMed ID

21350909

21 June 2017

language of work or name

English

0 references

publication date

25 February 2011

1 reference

Journal of Cardiovascular Translational Research

21 June 2017

1 reference

21 June 2017

4

1 reference

21 June 2017

3

1 reference

21 June 2017

281-303

1 reference

https://scigraph.springernature.com/pub.10.1007/s12265-011-9259-1

21 June 2017

0 references

cites work

Sequencing technologies - the next generation

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The complete genome of an individual by massively parallel DNA sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

dbSNP: the NCBI database of genetic variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Single nucleotide polymorphisms and the future of genetic epidemiology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Haplotype variation and linkage disequilibrium in 313 human genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

SNP association studies in Alzheimer's disease highlight problems for complex disease analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Genetic factors in the predisposition to drug-induced hypersensitivity reactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Meta-analysis of genetic association studies supports a contribution of common variants to susceptibility to common disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The future of genetic studies of complex human diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

SNP analysis combined with protein structure prediction defines structure-functional relationships in cancer related cytochrome P450 estrogen metabolism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Discovering genotypes underlying human phenotypes: past successes for mendelian disease, future approaches for complex disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Human Gene Mutation Database (HGMD): 2003 update.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

SNPs, protein structure, and disease.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Loss of protein structure stability as a major causative factor in monogenic disease.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Genome bioinformatic analysis of nonsynonymous SNPs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A structural bioinformatics approach to the analysis of nonsynonymous single nucleotide polymorphisms (nsSNPs) and their relation to disease.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Next-generation DNA sequencing methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Applications of new sequencing technologies for transcriptome analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Genome-wide association studies for complex traits: consensus, uncertainty and challenges

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Linkage disequilibrium and association mapping

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A genome-wide association study identifies novel risk loci for type 2 diabetes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Replication of genome-wide association signals in UK samples reveals risk loci for type 2 diabetes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Association scan of 14,500 nonsynonymous SNPs in four diseases identifies autoimmunity variants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Systematic sequencing of renal carcinoma reveals inactivation of histone modifying genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Patterns of somatic mutation in human cancer genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A comprehensive catalogue of somatic mutations from a human cancer genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The genomic landscapes of human breast and colorectal cancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

T1DBase: integration and presentation of complex data for type 1 diabetes research

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Public data archives for genomic structural variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The Swiss-Prot variant page and the ModSNP database: a resource for sequence and structure information on human protein variants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Easy retrieval of single amino-acid polymorphisms and phenotype information using SwissVar

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Characterization of single-nucleotide polymorphisms in coding regions of human genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Evolution of sickle variant gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Polymorphism of DNA sequence adjacent to human beta-globin structural gene: relationship to sickle mutation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A novel MHC class I-like gene is mutated in patients with hereditary haemochromatosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Identification of a variant associated with adult-type hypolactasia

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The road to genome-wide association studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Towards a structural basis of human non-synonymous single nucleotide polymorphisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Characterization of disease-associated single amino acid polymorphisms in terms of sequence and structure properties.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Predicting deleterious amino acid substitutions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Molecular basis of inherited diseases: a structural perspective

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Structural and functional restraints in the evolution of protein families and superfamilies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Slightly Deleterious Mutant Substitutions in Evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A polymorphic DNA marker genetically linked to Huntington's disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Identification of the cystic fibrosis gene: genetic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Identification of the cystic fibrosis gene: cloning and characterization of complementary DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Human genetic variation and its contribution to complex traits

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A map of human genome variation from population-scale sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Structural and genetic analysis of protein stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Genetic analysis of protein stability and function

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Folding and stability of the ligand-binding domain of the glucocorticoid receptor

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Structural analysis of a non-contiguous second-site revertant in T4 lysozyme shows that increasing the rigidity of a protein can enhance its stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Tertiary interactions in the folding pathway of hen lysozyme: kinetic studies using fluorescent probes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A comparison of the folding of two knotted proteins: YbeA and YibK.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Contrasting effects on HIF-1alpha regulation by disease-causing pVHL mutations correlate with patterns of tumourigenesis in von Hippel-Lindau disease.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A conserved docking motif in MAP kinases common to substrates, activators and regulators

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Novel mutation in the PML/RARalpha chimeric gene exhibits dramatically decreased ligand-binding activity and confers acquired resistance to retinoic acid in acute promyelocytic leukemia

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Key role of conserved histidines in recombinant mouse beta-carotene 15,15'-monooxygenase-1 activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Disulfide mutants of barnase. I: Changes in stability and structure assessed by biophysical methods and X-ray crystallography

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Enhanced protein thermostability from site-directed mutations that decrease the entropy of unfolding

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Tyrosine hydrogen bonds make a large contribution to protein stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Crystal structures of engrailed homeodomain mutants: implications for stability and dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Thermodynamic stability of wild-type and mutant p53 core domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Semirational design of active tumor suppressor p53 DNA binding domain with enhanced stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Crystal structure of a superstable mutant of human p53 core domain. Insights into the mechanism of rescuing oncogenic mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Structures of p53 cancer mutants and mechanism of rescue by second-site suppressor mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Effects of common cancer mutations on stability and DNA binding of full-length p53 compared with isolated core domains.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

21 January 2018

Mouse models of cancer

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Transgenic mouse models of multiple sclerosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The Sequence of the Human Genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A second generation human haplotype map of over 3.1 million SNPs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Predicting protein function from sequence and structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Bioinformatics approaches and resources for single nucleotide polymorphism functional analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Predicting the effects of amino acid substitutions on protein function

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Prediction of the stability of protein mutants based on structural environment-dependent amino acid substitution and propensity tables

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A neural-network-based method for predicting protein stability changes upon single point mutations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Prediction of protein stability changes for single-site mutations using support vector machines

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

CUPSAT: prediction of protein stability upon point mutations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Modeling backbone flexibility improves protein stability estimation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Prediction of sequence-dependent and mutational effects on the aggregation of peptides and proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

AGGRESCAN: a server for the prediction and evaluation of "hot spots" of aggregation in polypeptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The PASTA server for protein aggregation prediction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

ET viewer: an application for predicting and visualizing functional sites in protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

JEvTrace: refinement and variations of the evolutionary trace in JAVA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

MINER: software for phylogenetic motif identification

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

PDBSiteScan: a program for searching for active, binding and posttranslational modification sites in the 3D structures of proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Protein structure prediction using Rosetta

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Accounting for human polymorphisms predicted to affect protein function

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Prediction of deleterious human alleles

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

nsSNPAnalyzer: identifying disease-associated nonsynonymous single nucleotide polymorphisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

SNAP: predict effect of non-synonymous polymorphisms on function

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Predicting the insurgence of human genetic diseases associated to single point protein mutations with support vector machines and evolutionary information

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

AIRE's CARD revealed, a new structure for central tolerance provokes transcriptional plasticity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Mixed lineage kinase 3 gene mutations in mismatch repair deficient gastrointestinal tumours

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A TIR domain variant of MyD88 adapter-like (Mal)/TIRAP results in loss of MyD88 binding and reduced TLR2/TLR4 signaling

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Toward classification of BRCA1 missense variants using a biophysical approach.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Distinguishing structural and functional restraints in evolution in order to identify interaction sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

BIPA: a database for protein-nucleic acid interaction in 3D structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

CREDO: a protein-ligand interaction database for drug discovery.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Structural bioinformatics mutation analysis reveals genotype-phenotype correlations in von Hippel-Lindau disease and suggests molecular mechanisms of tumorigenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Novel TSHR mutations in consanguineous families with congenital nongoitrous hypothyroidism

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Tumor risks and genotype-phenotype-proteotype analysis in 358 patients with germline mutations in SDHB and SDHD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Prediction by graph theoretic measures of structural effects in proteins arising from non-synonymous single nucleotide polymorphisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

PANTHER: a library of protein families and subfamilies indexed by function

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A method and server for predicting damaging missense mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Structural interactomics: informatics approaches to aid the interpretation of genetic variation and the development of novel therapeutics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

JOY: protein sequence-structure representation and analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Annotating single amino acid polymorphisms in the UniProt/Swiss-Prot knowledgebase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Discarding functional residues from the substitution table improves predictions of active sites within three-dimensional structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The generic genome browser: a building block for a model organism system database

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

WormBase: a comprehensive resource for nematode research

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Integrating sequence and structural biology with DAS

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The amino-acid sequence in the phenylalanyl chain of insulin. 2. The investigation of peptides from enzymic hydrolysates

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The amino-acid sequence in the phenylalanyl chain of insulin. I. The identification of lower peptides from partial hydrolysates

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The Universal Protein Resource (UniProt).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

21 January 2018

The Protein Data Bank

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Understanding the molecular machinery of genetics through 3D structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Definition of general topological equivalence in protein structures. A procedure involving comparison of properties and relationships through simulated annealing and dynamic programming

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

From comparisons of protein sequences and structures to protein modelling and design

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A decade of CASP: progress, bottlenecks and prognosis in protein structure prediction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Basic local alignment search tool

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The Pfam protein families database

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Comparative modelling by restraint-based conformational sampling

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Rappertk: a versatile engine for discrete restraint-based conformational sampling of macromolecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Comparative protein modelling by satisfaction of spatial restraints

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Enhancement of protein modeling by human intervention in applying the automatic programs 3D-JIGSAW and 3D-PSSM.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

CHORAL: a differential geometry approach to the prediction of the cores of protein structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Large-scale protein modelling and integration with the SWISS-PROT and SWISS-2DPAGE databases: the example of Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Knowledge based modelling of homologous proteins, Part II: Rules for the conformations of substituted sidechains

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Structure validation by Calpha geometry: phi,psi and Cbeta deviation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Recognition of errors in three-dimensional structures of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Toward high-resolution de novo structure prediction for small proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Subtle variations in Pten dose determine cancer susceptibility

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Potential etiologic and functional implications of genome-wide association loci for human diseases and traits

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Hearing silence: non-neutral evolution at synonymous sites in mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Functional constraint and small insertions and deletions in the ENCODE regions of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

An initial map of insertion and deletion (INDEL) variation in the human genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Global variation in copy number in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Large-scale copy number polymorphism in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Diversity of human copy number variation and multicopy genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Variable tandem repeats accelerate evolution of coding and regulatory sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Small insertions and deletions (INDELs) in human genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Mutational effects and the evolution of new protein functions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Structural variation in the human genome and its role in disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Genomic copy number variation, human health, and disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Protein degradation and protection against misfolded or damaged proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Characterization of compensated mutations in terms of structural and physico-chemical properties.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Next-generation sequencing: applications beyond genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

RNA-Seq: a revolutionary tool for transcriptomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

HGBASE: a database of SNPs and other variations in and around human genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

HGVbase: a human sequence variation database emphasizing data quality and a broad spectrum of data sources

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

ProTherm: Thermodynamic Database for Proteins and Mutants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

ASEdb: a database of alanine mutations and their effects on the free energy of binding in protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Integrating mutation data and structural analysis of the TP53 tumor-suppressor protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

G6PDdb, an integrated database of glucose-6-phosphate dehydrogenase (G6PD) mutations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

MutDB: annotating human variation with functionally relevant data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

SNPper: retrieval and analysis of human SNPs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

topoSNP: a topographic database of non-synonymous single nucleotide polymorphisms with and without known disease association

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

LS-SNP: large-scale annotation of coding non-synonymous SNPs based on multiple information sources.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The SAAPdb web resource: a large-scale structural analysis of mutant proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

SNPeffect v2.0: a new step in investigating the molecular phenotypic effects of human non-synonymous SNPs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

SNPeffect: a database mapping molecular phenotypic effects of human non-synonymous coding SNPs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

SNP@Domain: a web resource of single nucleotide polymorphisms (SNPs) within protein domain structures and sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

PolyDoms: a whole genome database for the identification of non-synonymous coding SNPs with the potential to impact disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

DMDM: domain mapping of disease mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Fragment ranking in modelling of protein structure. Conformationally constrained environmental amino acid substitution tables.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Fast and accurate predictions of protein stability changes upon mutations using statistical potentials and neural networks: PoPMuSiC-2.0.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

PoPMuSiC, an algorithm for predicting protein mutant stability changes: application to prion proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Distance-scaled, finite ideal-gas reference state improves structure-derived potentials of mean force for structure selection and stability prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The FoldX web server: an online force field

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Human non-synonymous SNPs: server and survey

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

The GROMOS software for biomolecular simulation: GROMOS05.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

PMUT: a web-based tool for the annotation of pathological mutations on proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

FASTSNP: an always up-to-date and extendable service for SNP function analysis and prioritization.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

SNPs3D: candidate gene and SNP selection for association studies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Eris: an automated estimator of protein stability.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Finding new structural and sequence attributes to predict possible disease association of single amino acid polymorphism (SAP).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Structure SNP (StSNP): a web server for mapping and modeling nsSNPs on protein structures with linkage to metabolic pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Snap: an integrated SNP annotation platform

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

AUTO-MUTE: web-based tools for predicting stability changes in proteins due to single amino acid replacements.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Use of estimated evolutionary strength at the codon level improves the prediction of disease-related protein mutations in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

F-SNP: computationally predicted functional SNPs for disease association studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

CHARMM: the biomolecular simulation program

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

A spectrum of PCSK9 alleles contributes to plasma levels of low-density lipoprotein cholesterol.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Novel mutations of the PCSK9 gene cause variable phenotype of autosomal dominant hypercholesterolemia

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Prediction of nonsynonymous single nucleotide polymorphisms in human disease-associated genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Characterisation of the BRCT Domains of the Breast Cancer Susceptibility Gene Product BRCA1

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Kinetic Instability of p53 Core Domain Mutants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Tertiary structural constraints on protein evolutionary diversity: templates, key residues and structure prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12265-011-9259-1

Construction of a genetic linkage map in man using restriction fragment length polymorphisms

21 January 2018

1 reference

12 December 2020

A DNA polymorphism discovery resource for research on human genetic variation

1 reference

12 December 2020

Structural and functional constraints in the evolution of protein families

1 reference

12 December 2020

Stability and folding of the tumour suppressor protein p16

1 reference

12 December 2020

Ion mobility–mass spectrometry analysis of large protein complexes

1 reference

12 December 2020

The Catalogue of Somatic Mutations in Cancer (COSMIC)

1 reference

12 December 2020

The human genome browser at UCSC

1 reference

12 December 2020

Copy number variation and human genome maps

1 reference

12 December 2020

The benefits and limitations of animal models for translational research in neurodegenerative diseases

1 reference

12 December 2020

Temperature-sensitive mutations of bacteriophage T4 lysozyme occur at sites with low mobility and low solvent accessibility in the folded protein

1 reference

12 December 2020

Functional restraints on the patterns of amino acid substitutions: Application to sequence-structure homology recognition

1 reference

12 December 2020

TOPITS: threading one-dimensional predictions into three-dimensional structures

1 reference

12 December 2020

Contribution of residues in the reactive site loop of chymotrypsin inhibitor 2 to protein stability and activity

1 reference

12 December 2020

MSDsite: a database search and retrieval system for the analysis and viewing of bound ligands and active sites

1 reference

12 December 2020

Disulfide mutants of barnase. II: Changes in structure and local stability identified by hydrogen exchange

1 reference

12 December 2020

Variation is the spice of life

1 reference

12 December 2020

The new genomics: global views of biology

1 reference

12 December 2020

Structure of the hydrophobic core in the transition state for folding of chymotrypsin inhibitor 2: a critical test of the protein engineering method of analysis

1 reference

12 December 2020

Prospects for whole-genome linkage disequilibrium mapping of common disease genes

1 reference

12 December 2020

It's raining SNPs, hallelujah?

1 reference

12 December 2020

Equilibrium folding properties of the yeast prion protein determinant Ure2

1 reference

12 December 2020

SCOP: a structural classification of proteins database for the investigation of sequences and structures

1 reference

12 December 2020

Predicting protein stability changes from sequences using support vector machines.

1 reference

12 December 2020

Context-dependent nature of destabilizing mutations on the stability of FKBP12

1 reference

12 December 2020

The COSMIC (Catalogue of Somatic Mutations in Cancer) database and website

1 reference

12 December 2020

10.1007/S12265-011-9259-1

Identifiers

DOI

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/3x5nvukr3bc3zkmbknlzcwgumi

30 July 2022

mapped directly with Wikidata item

Dimensions Publication ID

1042547111

0 references

Fatcat ID

release_3x5nvukr3bc3zkmbknlzcwgumi

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/3x5nvukr3bc3zkmbknlzcwgumi

30 July 2022

mapped directly with Wikidata item

1 reference

https://api.fatcat.wiki/v0/release/3x5nvukr3bc3zkmbknlzcwgumi

30 July 2022