JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles (Q29619342)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19906716%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

title

JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles (English)

2 references

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30 April 2017

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12 February 2020

0 references

Elodie Portales-Casamar

1

1 reference

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12 February 2020

Supat Thongjuea

2

1 reference

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12 February 2020

Eivind Valen

6

1 reference

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12 February 2020

Boris Lenhard

8

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12 February 2020

Wyeth Wasserman

9

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Albin Sandelin

10

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3

Andrew T Kwon

1 reference

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12 February 2020

author name string

David Arenillas

4

1 reference

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12 February 2020

Xiaobei Zhao

5

1 reference

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12 February 2020

Dimas Yusuf

7

1 reference

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language of work or name

1 reference

30 April 2017

publication date

11 November 2009

1 reference

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12 February 2020

published in

Nucleic Acids Research

2 references

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30 April 2017

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12 February 2020

volume

38

2 references

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30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19906716%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

page(s)

D105-10

2 references

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30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19906716%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

issue

Database issue

2 references

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30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19906716%20AND%20SRC:MED&resulttype=core&format=json

A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors

12 February 2020

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A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters

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Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites

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30 April 2017

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High-resolution profiling of histone methylations in the human genome

30 April 2017

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Compact, universal DNA microarrays to comprehensively determine transcription-factor binding site specificities

30 April 2017

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Genome-wide analysis of mammalian promoter architecture and evolution

30 April 2017

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A new generation of JASPAR, the open-access repository for transcription factor binding site profiles

30 April 2017

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TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

30 April 2017

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JASPAR: an open-access database for eukaryotic transcription factor binding profiles

30 April 2017

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An overview of the structures of protein-DNA complexes

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ChIP-Seq of ERalpha and RNA polymerase II defines genes differentially responding to ligands

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The oncogenic EWS-FLI1 protein binds in vivo GGAA microsatellite sequences with potential transcriptional activation function

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Genome-wide profiling of PPARgamma:RXR and RNA polymerase II occupancy reveals temporal activation of distinct metabolic pathways and changes in RXR dimer composition during adipogenesis

3 June 2018

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Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences

3 June 2018

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3 June 2018

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PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation

3 June 2018

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The molecular signature and cis-regulatory architecture of a C. elegans gustatory neuron.

3 June 2018

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3 June 2018

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Protein binding microarrays (PBMs) for rapid, high-throughput characterization of the sequence specificities of DNA binding proteins

3 June 2018

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3 June 2018

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The Caenorhabditis elegans heterochronic regulator LIN-14 is a novel transcription factor that controls the developmental timing of transcription from the insulin/insulin-like growth factor gene ins-33 by direct DNA binding

3 June 2018

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3 June 2018

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3 June 2018

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3 June 2018

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3 June 2018

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The PAZAR database of gene regulatory information coupled to the ORCA toolkit for the study of regulatory sequences

3 June 2018

1 reference

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The beginning of the end for microarrays?

26 November 2018

1 reference

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A bacterial one-hybrid system for determining the DNA-binding specificity of transcription factors

26 November 2018

1 reference

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Genomic cis-regulatory architecture and trans-acting regulators of a single interneuron-specific gene battery in C. elegans.

26 November 2018

1 reference

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Constrained binding site diversity within families of transcription factors enhances pattern discovery bioinformatics.

26 November 2018

1 reference

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SCPD: a promoter database of the yeast Saccharomyces cerevisiae.

26 November 2018

1 reference

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=19906716

26 November 2018

Identifiers

3 references

30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19906716%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/Portales-CasamarTKAZVYLWS10

12 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=19906716

3 references

30 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19906716%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

3 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=19906716

30 April 2017