Genome-wide analysis of mammalian promoter architecture and evolution (Q29616717)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16645617%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

title

Genome-wide analysis of mammalian promoter architecture and evolution (English)

2 references

PubMed

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30 April 2017

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Corrigendum: Genome-wide analysis of mammalian promoter architecture and evolution

20 January 2020

corrigendum / erratum

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author

Piero Carninci

1

1 reference

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20 January 2020

Albin Sandelin

2

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20 January 2020

Boris Lenhard

3

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20 January 2020

Shintaro Katayama

4

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20 January 2020

Martin S. Taylor

8

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20 January 2020

Pär G Engström

9

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20 January 2020

Martin C Frith

10

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20 January 2020

Alistair Forrest

11

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20 January 2020

Wynand Alkema

12

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20 January 2020

Charles Plessy

14

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20 January 2020

Rimantas Kodzius

15

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Timothy Ravasi

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Takeya Kasukawa

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20 January 2020

Hideya Kawaji

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20 January 2020

Sean Grimmond

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Christine A Wells

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Matthias Harbers

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20 January 2020

Vladimir B. Bajic

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David A Hume

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Peter Arner

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Yoshihide Hayashizaki

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Mutsumi Kanamori-Katayama

20 January 2020

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Francesca Persichetti

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20 January 2020

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Sin Lam Tan

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20 January 2020

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Shiro Fukuda

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20 January 2020

22

Chikatoshi Kai

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20 January 2020

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20 January 2020

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20 January 2020

26

Salim Mottagui-Tabar

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20 January 2020

28

Alessandra Chesi

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20 January 2020

author name string

Yayoi Kitazume

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20 January 2020

Mari Nakamura

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20 January 2020

Edison T Liu

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20 January 2020

Jun Kawai

38

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20 January 2020

language of work or name

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30 April 2017

publication date

28 April 2006

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20 January 2020

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30 April 2017

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20 January 2020

volume

38

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30 April 2017

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20 January 2020

page(s)

626-635

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20 January 2020

issue

6

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30 April 2017

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Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

20 January 2020

cites work

1 reference

Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage

1 May 2017

1 reference

The transcriptional landscape of the mammalian genome

1 May 2017

1 reference

Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library

1 May 2017

1 reference

The UCSC Genome Browser Database

1 May 2017

1 reference

The RNA polymerase II core promoter: a key component in the regulation of gene expression

1 May 2017

1 reference

Antisense transcription in the mammalian transcriptome

1 May 2017

1 reference

Identification of conserved regulatory elements by comparative genome analysis

1 May 2017

1 reference

Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

1 May 2017

1 reference

Cluster analysis and display of genome-wide expression patterns

1 May 2017

1 reference

Promoter features related to tissue specificity as measured by Shannon entropy

1 May 2017

1 reference

The two NF-kappaB activation pathways and their role in innate and adaptive immunity

1 May 2017

1 reference

Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays

1 May 2017

1 reference

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

1 May 2017

1 reference

Genomic mapping of RNA polymerase II reveals sites of co-transcriptional regulation in human cells

1 May 2017

1 reference

Promoter prediction analysis on the whole human genome.

1 May 2017

1 reference

7 January 2021

Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia

1 reference

7 January 2021

CAGE: cap analysis of gene expression

1 reference

7 January 2021

The balance sheet for transcription: an analysis of nuclear RNA metabolism in mammalian cells

1 reference

7 January 2021

Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences

1 reference

7 January 2021

Identification and Characterization of the Potential Promoter Regions of 1031 Kinds of Human Genes

1 reference

7 January 2021

The DPE, a core promoter element for transcription by RNA polymerase II.

1 reference

7 January 2021

The RNA polymerase II core promoter

1 reference

7 January 2021

The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila

1 reference

7 January 2021

Sequence logos: a new way to display consensus sequences

1 reference

7 January 2021

An abundance of bidirectional promoters in the human genome

1 reference

7 January 2021

Identification of functional elements in the murine Gabp alpha/ATP synthase coupling factor 6 bi-directional promoter

1 reference

7 January 2021

Transcriptional collision between convergent genes in budding yeast.

1 reference

7 January 2021

Functional constraints and frequency of deleterious mutations in noncoding DNA of rodents

1 reference

7 January 2021

Absolute expression values for mouse transcripts: re-annotation of the READ expression database by the use of CAGE and EST sequence tags.

1 reference

7 January 2021

Constrained binding site diversity within families of transcription factors enhances pattern discovery bioinformatics.

1 reference

7 January 2021

Complex controls: the role of alternative promoters in mammalian genomes

1 reference

7 January 2021

Transcriptional regulation in myelopoiesis: Hematopoietic fate choice, myeloid differentiation, and leukemogenesis

1 reference

7 January 2021

The ENCODE (ENCyclopedia Of DNA Elements) Project

1 reference

7 January 2021

NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

1 reference

7 January 2021

Rules of engagement: co-transcriptional recruitment of pre-mRNA processing factors

1 reference

7 January 2021

Distribution of exonic splicing enhancer elements in human genes

1 reference

7 January 2021

Non-coding RNA directed DNA demethylation of Sphk1 CpG island.

1 reference

7 January 2021

Inferring combinatorial regulation of transcription in silico

1 reference

7 January 2021

Combining phylogenetic and hidden Markov models in biosequence analysis

1 reference

7 January 2021

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=16645617

Identifiers

3 references

30 April 2017

Consolidated OpenCitations Corpus – April 2017

704160

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Dimensions Publication ID

20 January 2020

1001417778

0 references

704160

1 reference

Consolidated OpenCitations Corpus – April 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=16645617

3 references

30 April 2017

Consolidated OpenCitations Corpus – April 2017

704160

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