Deep sequencing strategies for mapping and identifying mutations from genetic screens (Q26862831)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24778934%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

author name string

Sophie Jarriault

series ordinal

2

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24778934%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

language of work or name

1 reference

1 July 2013

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24778934%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

volume

2

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24778934%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

issue

3

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24778934%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

page(s)

e25081

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24778934%20AND%20SRC:MED&resulttype=core&format=json

Whole-genome profiling of mutagenesis in Caenorhabditis elegans

1 June 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Mapping short DNA sequencing reads and calling variants using mapping quality scores

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Rapid single nucleotide polymorphism mapping in C. elegans

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Unlocking the bottleneck in forward genetics using whole-genome sequencing and identity by descent to isolate causative mutations

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

The Sequence Alignment/Map format and SAMtools

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Fast and accurate long-read alignment with Burrows-Wheeler transform

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Next-generation DNA sequencing

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Genome-wide RNAi screening in Caenorhabditis elegans

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Rapid gene mapping in Caenorhabditis elegans using a high density polymorphism map

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Advances in understanding cancer genomes through second-generation sequencing

7 April 2017

1 reference

https://api.crossref.org/works/10.4161%2FWORM.25081

Rapid positional cloning of zebrafish mutations by linkage and homozygosity mapping using whole-genome sequencing

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

CloudMap: a cloud-based pipeline for analysis of mutant genome sequences

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

De novo mutations in human genetic disease

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Members of the NODE (Nanog and Oct4-associated deacetylase) complex and SOX-2 promote the initiation of a natural cellular reprogramming event in vivo.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

The evolution of gene expression and the transcriptome-phenotype relationship.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

WormBase 2012: more genomes, more data, new website

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Rapid mapping and identification of mutations in Caenorhabditis elegans by restriction site-associated DNA mapping and genomic interval pull-down sequencing.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Direct in vivo cellular reprogramming involves transition through discrete, non-pluripotent steps

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Whole genome sequencing highlights genetic changes associated with laboratory domestication of C. elegans

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

C. elegans mutant identification with a one-step whole-genome-sequencing and SNP mapping strategy

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

A strategy for direct mapping and identification of mutations by whole-genome sequencing

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Analysis of multiple ethyl methanesulfonate-mutagenized Caenorhabditis elegans strains by whole-genome sequencing

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

MAQGene: software to facilitate C. elegans mutant genome sequence analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Distribution of meiotic recombination events: talking to your neighbors

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Caenorhabditis elegans mutant allele identification by whole-genome sequencing

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

A Caenorhabditis elegans model for epithelial-neuronal transdifferentiation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

High-density detection of restriction-site-associated DNA markers for rapid mapping of mutated loci in Neurospora.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

ON THE MUTAGENIC EFFECT OF ALKYLATING AGENTS.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Crossover distribution and high interference for both the X chromosome and an autosome during oogenesis and spermatogenesis in Caenorhabditis elegans

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

The art and design of genetic screens: caenorhabditis elegans

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Natural variation and copulatory plug formation in Caenorhabditis elegans

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

A genetic mapping system in Caenorhabditis elegans based on polymorphic sequence-tagged sites

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Genetic studies of the lac repressor. III. Additional correlation of mutational sites with specific amino acid residues

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3875646

Whole-genome sequencing and variant discovery in C. elegans.

31 May 2018

1 reference

https://api.crossref.org/works/10.4161%2FWORM.25081

High mutation rate and predominance of insertions in the Caenorhabditis elegans nuclear genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FWORM.25081

SHOREmap: simultaneous mapping and mutation identification by deep sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FWORM.25081

Genome sequencing reveals agronomically important loci in rice using MutMap.

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FWORM.25081

Building stem-cell genomics in California and beyond

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FWORM.25081

Gene sequencing leaves the laboratory

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/24778934

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.4161/WORM.25081

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24778934%20AND%20SRC:MED&resulttype=core&format=json

release_w7ecwmzzanc4tmjvltqzurzvx4

1 June 2020

Fatcat ID

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24778934%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24778934%20AND%20SRC:MED&resulttype=core&format=json