Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade (Q22037756)

26 June 2017

Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade (English)

1 reference

Correction for Boothby et al., Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade

26 June 2017

horizontal gene transfer

0 references

corrigendum / erratum

0 references

10

Mark Yandell

Mark

Yandell

1 reference

6 February 2023

David N Messina

11

David N

Messina

1 reference

6 February 2023

Erin Osborne Nishimura

6

Erin Osborne

Nishimura

1 reference

6 February 2023

Bob Goldstein

13

Bob

Goldstein

1 reference

6 February 2023

12

Jarret Glasscock

Jarret

Glasscock

1 reference

26 June 2017

Thomas C Boothby

1

Thomas C

Boothby

1 reference

26 June 2017

Jennifer R Tenlen

2

Jennifer R

Tenlen

1 reference

26 June 2017

Frank W Smith

3

Frank W

Smith

1 reference

26 June 2017

Jeremy R Wang

4

Jeremy R

Wang

1 reference

26 June 2017

Kiera A Patanella

5

Kiera A

Patanella

1 reference

26 June 2017

Sophia C Tintori

7

Sophia C

Tintori

1 reference

26 June 2017

Qing Li

8

Qing

Li

1 reference

26 June 2017

Corbin D Jones

9

Corbin D

Jones

1 reference

26 June 2017

language of work or name

English

0 references

publication date

23 November 2015

1 reference

Proceedings of the National Academy of Sciences of the United States of America

26 June 2017

1 reference

26 June 2017

112

1 reference

26 June 2017

15976-15981

1 reference

26 June 2017

52

1 reference

Analysis of DNA repair and protection in the Tardigrade Ramazzottius varieornatus and Hypsibius dujardini after exposure to UVC radiation

26 June 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

InterPro: the integrative protein signature database

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Gene finding in novel genomes

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

MUSCLE: multiple sequence alignment with high accuracy and high throughput

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Genomic evidence for ameiotic evolution in the bdelloid rotifer Adineta vaga

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Massive Horizontal Gene Transfer in Bdelloid Rotifers

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

The tardigrade Hypsibius dujardini, a new model for studying the evolution of development

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Basic local alignment search tool

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

MRBAYES: Bayesian inference of phylogenetic trees

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Tandem repeats finder: a program to analyze DNA sequences

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Biochemical diversification through foreign gene expression in bdelloid rotifers

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Genomic inference accurately predicts the timing and severity of a recent bottleneck in a nonmodel insect population

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

The Universal Protein Resource (UniProt) in 2010

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

An improved general amino acid replacement matrix

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Galaxy: a platform for interactive large-scale genome analysis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Scaffolding pre-assembled contigs using SSPACE

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

NCBI Reference Sequences: current status, policy and new initiatives

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

A whole-genome assembly of Drosophila

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Towards decrypting cryptobiosis--analyzing anhydrobiosis in the tardigrade Milnesium tardigradum using transcriptome sequencing

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Translesion DNA polymerases

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

A beginner's guide to eukaryotic genome annotation

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Masked mRNA is stored with aggregated nuclear speckles and its asymmetric redistribution requires a homolog of Mago nashi

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Quantitative measures for the management and comparison of annotated genomes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Extreme resistance of bdelloid rotifers to ionizing radiation

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Oxidative stress and its effects during dehydration.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

The evolution of spliceosomal introns: patterns, puzzles and progress

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

High-quality protein knowledge resource: SWISS-PROT and TrEMBL.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Microbial genes in the human genome: lateral transfer or gene loss?

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

The function of heat-shock proteins in stress tolerance: degradation and reactivation of damaged proteins

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

AUGUSTUS: a web server for gene finding in eukaryotes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Posttranscriptional control over rapid development and ciliogenesis in Marsilea

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702960

Tardigrades survive exposure to space in low Earth orbit.

30 May 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1510461112

Survival and DNA degradation in anhydrobiotic tardigrades

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1510461112

Induction of Hsp70 by desiccation, ionising radiation and heat-shock in the eutardigrade Richtersius coronifer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1510461112

Endosymbiotic origin and differential loss of eukaryotic genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1510461112

Removal of retained introns regulates translation in the rapidly developing gametophyte of Marsilea vestita

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1510461112

Tardigrade Resistance to Space Effects: first results of experiments on the LIFE-TARSE mission on FOTON-M3 (September 2007).

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1510461112

DNA damage in storage cells of anhydrobiotic tardigrades

21 January 2018

1 reference

12 December 2020

The sequence manipulation suite: JavaScript programs for analyzing and formatting protein and DNA sequences

1 reference

12 December 2020

Radiation tolerance in the eutardigrade Richtersius coronifer

1 reference

12 December 2020

Solute leakage resulting from leaf desiccation

1 reference

12 December 2020

The cytology of parthenogenesis in the tardigrade Hypsibius dujardini

1 reference

12 December 2020

Phylogenetic analyses do not support horizontal gene transfers from bacteria to vertebrates

1 reference

12 December 2020

Anhydrobiosis in invertebrates

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1510461112

7 January 2021

inferred from DOI database lookup

Energy allocation in two species of Eutardigrada

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1510461112

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1073/PNAS.1510461112

1 reference

OpenCitations bibliographic resource ID

26 June 2017

0 references

2375763

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference