The evolution of spliceosomal introns: patterns, puzzles and progress (Q34495531)

2 August 2017

1 reference

title

The evolution of spliceosomal introns: patterns, puzzles and progress (English)

1 reference

2 August 2017

0 references

Scott William Roy

1

1 reference

PubMed ID

16485020

2 August 2017

Walter Gilbert

series ordinal

2

1 reference

2 August 2017

1 March 2006

1 reference

2 August 2017

Nature Reviews Genetics

1 reference

2 August 2017

7

1 reference

2 August 2017

211-221

1 reference

2 August 2017

3

1 reference

https://scigraph.springernature.com/pub.10.1038/nrg1807

2 August 2017

0 references

cites work

Genetic engineering in the Precambrian: structure of the chicken triosephosphate isomerase gene

1 reference

Structural conservation and variation among U5 small nuclear RNAs from trypanosomatid protozoa.

21 January 2018

1 reference

Evolutionary relationships among "jakobid" flagellates as indicated by alpha- and beta-tubulin phylogenies.

21 January 2018

1 reference

The chaperonin genes of jakobid and jakobid-like flagellates: implications for eukaryotic evolution.

21 January 2018

1 reference

Testing the "proto-splice sites" model of intron origin: evidence from analysis of intron phase correlations.

21 January 2018

1 reference

Frequent intron loss in the white gene: a cautionary tale for phylogeneticists.

21 January 2018

1 reference

The ins and outs of group II introns

21 January 2018

1 reference

31 March 2020

Mobile group II introns

1 reference

Pre-mRNA splicing: awash in a sea of proteins

31 March 2020

1 reference

The generality of self-splicing RNA: relationship to nuclear mRNA splicing

31 March 2020

1 reference

How were introns inserted into nuclear genes?

31 March 2020

1 reference

31 March 2020

1 reference

On the possibility of constructive neutral evolution

31 March 2020

1 reference

Intron presence-absence polymorphism in Drosophila driven by positive Darwinian selection

31 March 2020

1 reference

A variable intron distribution in globin genes of Chironomus: evidence for recent intron gain

31 March 2020

1 reference

Selfish DNA: the ultimate parasite

31 March 2020

1 reference

Selfish genes, the phenotype paradigm and genome evolution

31 March 2020

1 reference

31 March 2020

The exon theory of genes

1 reference

Gene Regulation for Higher Cells: A Theory

31 March 2020

1 reference

Repetitive and Non-Repetitive DNA Sequences and a Speculation on the Origins of Evolutionary Novelty

31 March 2020

1 reference

Intron evolution as a population-genetic process

31 March 2020

1 reference

The origins of genome complexity

31 March 2020

1 reference

31 March 2020

1 reference

Genes in pieces: were they ever together?

31 March 2020

1 reference

Do genes-in-pieces imply proteins-in-pieces?

31 March 2020

1 reference

The evolution of genes: the chicken preproinsulin gene.

31 March 2020

1 reference

Correlation of DNA exonic regions with protein structural units in haemoglobin

31 March 2020

1 reference

Intron-dependent evolution of chicken glyceraldehyde phosphate dehydrogenase gene

31 March 2020

1 reference

Intron phase correlations and the evolution of the intron/exon structure of genes

31 March 2020

1 reference

Intron positions correlate with module boundaries in ancient proteins

31 March 2020

1 reference

Toward a resolution of the introns early/late debate: only phase zero introns are correlated with the structure of ancient proteins

31 March 2020

1 reference

Centripetal modules and ancient introns.

31 March 2020

1 reference

Intron distribution difference for 276 ancient and 131 modern genes suggests the existence of ancient introns

31 March 2020

1 reference

Footprints of primordial introns on the eukaryotic genome.

31 March 2020

1 reference

Phylogenetically older introns strongly correlate with module boundaries in ancient proteins

31 March 2020

1 reference

The signal of ancient introns is obscured by intron density and homolog number

31 March 2020

1 reference

The emergence of a synthetic theory of intron evolution

31 March 2020

1 reference

Recent evidence for the exon theory of genes

31 March 2020

1 reference

Genome evolution and the evolution of exon-shuffling--a review

31 March 2020

1 reference

Modular assembly of genes and the evolution of new functions

31 March 2020

1 reference

Sequence of a mouse germ-line gene for a variable region of an immunoglobulin light chain

31 March 2020

1 reference

Why do genes have introns? Recombination might add a new piece to the puzzle.

31 March 2020

1 reference

Messenger RNA surveillance and the evolutionary proliferation of introns

31 March 2020

1 reference

Selfish DNA and the origin of introns

31 March 2020

1 reference

On the origin of RNA splicing and introns

31 March 2020

1 reference

Evidence that introns arose at proto-splice sites.

31 March 2020

1 reference

The recent origins of introns

31 March 2020

1 reference

Testing the exon theory of genes: the evidence from protein structure

31 March 2020

1 reference

Origin of introns–early or late?

31 March 2020

1 reference

Seven newly discovered intron positions in the triose-phosphate isomerase gene: evidence for the introns-late theory

31 March 2020

1 reference

Evidence against the exon theory of genes derived from the triose-phosphate isomerase gene

31 March 2020

1 reference

Intron distribution in ancient paralogs supports random insertion and not random loss

31 March 2020

1 reference

Exon/intron structure of aldehyde dehydrogenase genes supports the "introns-late" theory.

31 March 2020

1 reference

The recent origins of spliceosomal introns revisited

31 March 2020

1 reference

Molecular evolution: recent cases of spliceosomal intron gain?

31 March 2020

1 reference

Large-scale comparison of intron positions among animal, plant, and fungal genes

31 March 2020

1 reference

Remarkable interkingdom conservation of intron positions and massive, lineage-specific intron loss and gain in eukaryotic evolution

31 March 2020

1 reference

A new Drosophila spliceosomal intron position is common in plants

31 March 2020

1 reference

Proto-splice site model of intron origin.

31 March 2020

1 reference

Intron-exon organization and phylogeny in a large superfamily, the paralogous cytochrome P450 genes of Arabidopsis thaliana.

31 March 2020

1 reference

Reconstruction of ancestral protosplice sites

31 March 2020

1 reference

Origins of recently gained introns in Caenorhabditis

31 March 2020

1 reference

The evolutionary gain of spliceosomal introns: sequence and phase preferences.

31 March 2020

1 reference

Insertion of spliceosomal introns in proto-splice sites: the case of secretory signal peptides

31 March 2020

1 reference

Molecular evolution: introns fall into place

31 March 2020

1 reference

Conservation versus parallel gains in intron evolution

31 March 2020

1 reference

31 March 2020

1 reference

Analysis of evolution of exon-intron structure of eukaryotic genes

31 March 2020

1 reference

Large-scale comparison of intron positions in mammalian genes shows intron loss but no gain

31 March 2020

1 reference

A phylogeny of caenorhabditis reveals frequent loss of introns during nematode evolution

31 March 2020

1 reference

Caenorhabditis phylogeny predicts convergence of hermaphroditism and extensive intron loss

31 March 2020

1 reference

Two large families of chemoreceptor genes in the nematodes Caenorhabditis elegans and Caenorhabditis briggsae reveal extensive gene duplication, diversification, movement, and intron loss

31 March 2020

1 reference

Footprints of primordial introns on the eukaryotic genome: still no clear traces

31 March 2020

1 reference

Miniature Genome in the Marine Chordate Oikopleura dioica

31 March 2020

1 reference

Hypervariable and highly divergent intron-exon organizations in the chordate Oikopleura dioica.

31 March 2020

1 reference

Prevalence of intron gain over intron loss in the evolution of paralogous gene families

31 March 2020

1 reference

Early branching eukaryotes?

31 March 2020

1 reference

Eukaryotic Evolution: Getting to the Root of the Problem

31 March 2020

1 reference

Early evolution and the origin of eukaryotes

31 March 2020

1 reference

Origin and early evolution of eukaryotes inferred from the amino acid sequences of translation elongation factors 1alpha/Tu and 2/G.

31 March 2020

1 reference

Amitochondriate amoebae and the evolution of DNA-dependent RNA polymerase II

31 March 2020

1 reference

A small spliceosomal-type intron occurs in a ribosomal protein gene of the microsporidian Encephalitozoon cuniculi.

31 March 2020

1 reference

U2 and U6 snRNA genes in the microsporidian Nosema locustae: evidence for a functional spliceosome

31 March 2020

1 reference

Trichomonas vaginalis possesses a gene encoding the essential spliceosomal component, PRP8.

31 March 2020

1 reference

U1 small nuclear RNA and spliceosomal introns in Euglena gracilis

31 March 2020

1 reference

Characterization of a SR protein from Trypanosoma brucei with homology to RNA-binding cis-splicing proteins.

31 March 2020

1 reference

Reconstructing/deconstructing the earliest eukaryotes: how comparative genomics can help

31 March 2020

1 reference

A spliceosomal intron in Giardia lamblia

31 March 2020

1 reference

Eukaryotic evolution: early origin of canonical introns.

31 March 2020

1 reference

Complex spliceosomal organization ancestral to extant eukaryotes

31 March 2020

1 reference

Spliceosomal introns in the deep-branching eukaryote Trichomonas vaginalis

31 March 2020

1 reference

Comparative genomics and evolution of proteins involved in RNA metabolism

31 March 2020

1 reference

Can codon usage bias explain intron phase distributions and exon symmetry?

31 March 2020

1 reference

Relationship between "proto-splice sites" and intron phases: evidence from dicodon analysis

31 March 2020

1 reference

Pseudogenes for human small nuclear RNA U3 appear to arise by integration of self-primed reverse transcripts of the RNA into new chromosomal sites.

31 March 2020

1 reference

How Mammalian RNA Returns to Its Genome

31 March 2020

1 reference

Nonviral retroposons: genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information

31 March 2020

1 reference

31 March 2020

Pseudogenes in yeast?

1 reference

Conservation, regulation, synteny, and introns in a large-scale C. briggsae-C. elegans genomic alignment

31 March 2020

1 reference

Introns in gene evolution

31 March 2020

1 reference

Patterns of intron gain and loss in fungi

31 March 2020

1 reference

Evidence that human genes of modular proteins have retained significantly more ancestral introns than their fly or worm orthologues.

31 March 2020

1 reference

On biased distribution of introns in various eukaryotes

31 March 2020

1 reference

31 March 2020

Eukaryotic intron loss

1 reference

Dynamic insertion-deletion of introns in deuterostome EF-1alpha genes

31 March 2020

1 reference

Preferential loss and gain of introns in 3' portions of genes suggests a reverse-transcription mechanism of intron insertion

31 March 2020

1 reference

The pattern of intron loss

31 March 2020

1 reference

Chromosome Structure and Function. Future Prospects

31 March 2020

1 reference

Split Genes and RNA Splicing

31 March 2020

1 reference

The dna sequence of bombyx mori fibroin gene including the 5′ flanking, mRNA coding, entire intervening and fibroin protein coding regions

31 March 2020

1 reference

De novo synthesis of an intron by the maize transposable element Dissociation

31 March 2020

1 reference

The role of introns in evolution

31 March 2020

1 reference

The origin of recent introns: transposons?

31 March 2020

1 reference

Rates of intron loss and gain: implications for early eukaryotic evolution

31 March 2020

1 reference

Conservation of long-range synteny and microsynteny between the genomes of two distantly related nematodes

31 March 2020

1 reference

Very low gene duplication rate in the yeast genome

31 March 2020

1 reference

A perfect message: RNA surveillance and nonsense-mediated decay

31 March 2020

1 reference

How did alternative splicing evolve?

31 March 2020

1 reference

Selection for short introns in highly expressed genes

31 March 2020

1 reference

Insertion/deletion and nucleotide polymorphism data reveal constraints in Drosophila melanogaster introns and intergenic regions

31 March 2020

1 reference

Intron size correlates positively with recombination rate in Caenorhabditis elegans

31 March 2020

1 reference

31 March 2020

Identifiers

DOI

10.1038/NRG1807

1 reference

PubMed ID

16485020

Dimensions Publication ID

2 August 2017

0 references

1 reference

PubMed ID

16485020