De novo sequence assembly of Albugo candida reveals a small genome relative to other biotrophic oomycetes (Q21267173)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

title

De novo sequence assembly of Albugo candida reveals a small genome relative to other biotrophic oomycetes (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Albugo candida

1 reference

1 reference

1

Matthew G Links

Matthew G

Links

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Hossein Borhan

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Eric Holub

2

Eric

Holub

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Rays H Y Jiang

3

Rays H Y

Jiang

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Andrew G Sharpe

4

Andrew G

Sharpe

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Dwayne Hegedus

5

Dwayne

Hegedus

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Elena Beynon

6

Elena

Beynon

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Dean Sillito

7

Dean

Sillito

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Wayne E Clarke

8

Wayne E

Clarke

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Shihomi Uzuhashi

9

Shihomi

Uzuhashi

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Mohammad H Borhan

Mohammad H

Borhan

10

1 reference

19 August 2022

language of work or name

English

0 references

publication date

13 October 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

volume

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

issue

1

0 references

page(s)

503

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

14 February 2020

MUMmer

object named as

MUMMER

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-503

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-503

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An efficient algorithm for large-scale detection of protein families

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Analyses of genome architecture and gene expression reveal novel candidate virulence factors in the secretome of Phytophthora infestans

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12 September 2017

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Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire

12 September 2017

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12 September 2017

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12 September 2017

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A new species of Albugo parasitic to Arabidopsis thaliana reveals new evolutionary patterns in white blister rusts (Albuginaceae)

12 September 2017

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12 September 2017

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12 September 2017

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12 September 2017

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12 September 2017

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Evidence for uncharted biodiversity in the Albugo candida complex, with the description of a new species

12 September 2017

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Effector genomics accelerates discovery and functional profiling of potato disease resistance and phytophthora infestans avirulence genes

12 September 2017

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WRR4 encodes a TIR-NB-LRR protein that confers broad-spectrum white rust resistance in Arabidopsis thaliana to four physiological races of Albugo candida.

12 September 2017

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Oomycete RXLR effectors: delivery, functional redundancy and durable disease resistance

12 September 2017

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12 September 2017

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Transcriptome of Aphanomyces euteiches: new oomycete putative pathogenicity factors and metabolic pathways

12 September 2017

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Whole-genome analysis reveals molecular innovations and evolutionary transitions in chromalveolate species

12 September 2017

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High-efficiency protein expression in plants from agroinfection-compatible Tobacco mosaic virus expression vectors

12 September 2017

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Expressed sequence tags from phytophthora sojae reveal genes specific to development and infection

12 September 2017

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Structure and function of resistance proteins in solanaceous plants.

12 September 2017

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Nep1-like proteins from plant pathogens: recruitment and diversification of the NPP1 domain across taxa

12 September 2017

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Phylogenetic relationships of Albugo species (white blister rusts) based on LSU rDNA sequence and oospore data

12 September 2017

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The structure of the bacterial protein translocation complex SecYEG.

12 September 2017

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An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognized in the host cytoplasm

12 September 2017

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Tat-dependent protein targeting in prokaryotes and chloroplasts

12 September 2017

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Molecular genetics of pathogenic oomycetes

12 September 2017

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Sequence and phylogenetic analyses of the twin-arginine targeting (Tat) protein export system

12 September 2017

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Phenotypic and genotypic variation in the interaction between Arabidopsis thaliana and Albugo candida.

12 September 2017

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Sporangium-specific gene expression in the oomycete phytopathogen Phytophthora infestans

12 September 2017

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EST mining and functional expression assays identify extracellular effector proteins from the plant pathogen Phytophthora

27 September 2017

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27 September 2017

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A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites.

27 September 2017

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Cloning and characterization of a cDNA encoding an elicitor of Phytophthora parasitica var. nicotianae that shows cellulose-binding and lectin-like activities.

30 May 2018

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A gene encoding a host-specific elicitor protein of Phytophthora parasitica

30 May 2018

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Meiotic instability of Pythium sylvaticum as demonstrated by inheritance of nuclear markers and karyotype analysis

30 May 2018

1 reference

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The Avr1b locus of Phytophthora sojae encodes an elicitor and a regulator required for avirulence on soybean plants carrying resistance gene Rps1b

30 May 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-503

Host-parasite coevolutionary conflict between Arabidopsis and downy mildew.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-503

Differential recognition of highly divergent downy mildew avirulence gene alleles by RPP1 resistance genes from two Arabidopsis lines.

21 January 2018

1 reference

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External lipid PI3P mediates entry of eukaryotic pathogen effectors into plant and animal host cells.

21 January 2018

1 reference

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A translocation signal for delivery of oomycete effector proteins into host plant cells

21 January 2018

1 reference

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Expression of a Phytophthora sojae necrosis-inducing protein occurs during transition from biotrophy to necrotrophy

21 January 2018

1 reference

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Evidence for the importance of enzymatic digestion of epidermal walls during subepidermal sporulation and pustule opening in white blister rusts (Albuginaceae).

21 January 2018

1 reference

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Basic compatibility of Albugo candida in Arabidopsis thaliana and Brassica juncea causes broad-spectrum suppression of innate immunity

21 January 2018

1 reference

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Linkage mapping of genes controlling resistance to white rust (Albugo candida) in Brassica rapa (syn. campestris) and comparative mapping to Brassica napus and Arabidopsis thaliana

21 January 2018

1 reference

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The arabidopsis TIR-NB-LRR gene RAC1 confers resistance to Albugo candida (white rust) and is dependent on EDS1 but not PAD4.

21 January 2018

1 reference

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Genome size determination in peronosporales (Oomycota) by Feulgen image analysis

21 January 2018

1 reference

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TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders.

21 January 2018

1 reference

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Cellulose binding domains of a Phytophthora cell wall protein are novel pathogen-associated molecular patterns.

21 January 2018

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Ancient origin of elicitin gene clusters in Phytophthora genomes

21 January 2018

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A gene encoding a protein elicitor of Phytophthora infestans is down-regulated during infection of potato.

21 January 2018

1 reference

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Conserved C-terminal motifs required for avirulence and suppression of cell death by Phytophthora sojae effector Avr1b

21 January 2018

1 reference

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DNA sequence quality trimming and vector removal.

21 January 2018

1 reference

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Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism

21 January 2018

1 reference

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A Neural Network Method for Identification of Prokaryotic and Eukaryotic Signal Peptides and Prediction of their Cleavage Sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-503

White rust (Albugo candida) resistance loci on three Arabidopsis chromosomes are closely linked to downy mildew (Peronospora parasitica) resistance loci.

21 January 2018

1 reference

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Using geneid to identify genes

29 November 2018

1 reference

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Genetic and molecular analyses in crosses of race 2 and race 7 of albugo Candida

29 November 2018

1 reference

12 December 2020

Molecular mapping reveals two independent loci conferring resistance to Albugo candida in the east European germplasm of oilseed mustard Brassica juncea

1 reference

12 December 2020

WRR4, a broad-spectrum TIR-NB-LRR gene from Arabidopsis thaliana that confers white rust resistance in transgenic oilseed Brassica crops

1 reference

12 December 2020

Brassica napus DNA markers linked to white rust resistance in Brassica juncea

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-12-503

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

14 February 2020

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-503

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995639%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

2 references