The short isoform of the host antiviral protein ZAP acts as an inhibitor of SARS-CoV-2 programmed ribosomal frameshifting (Q110477997)

1

0 references

Anuja Kibe

2

0 references

Ulfert Rand

3

0 references

Lukas Pekarek

4

0 references

Liqing Ye

5

0 references

Stefan Buck

6

0 references

Redmond P. Smyth

7

0 references

Luka Cicin-Sain

8

0 references

Neva Caliskan

describes a project that uses

9

0 references

publication date

December 2021

0 references

published in

Nature Communications

0 references

volume

12

0 references

issue

1

0 references

ImageJ

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC8664833/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

DHX36 prevents the accumulation of translationally inactive mRNAs with G4-structures in untranslated regions

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Regulation of HIV-1 Gag-Pol Expression by Shiftless, an Inhibitor of Programmed -1 Ribosomal Frameshifting

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Structure of the zinc-finger antiviral protein in complex with RNA reveals a mechanism for selective targeting of CG-rich viral sequences

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

SARS-CoV-2 Is Restricted by Zinc Finger Antiviral Protein despite Preadaptation to the Low-CpG Environment in Humans

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Cryo-EM Structure of the Human Ribonuclease P Holoenzyme

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

A SARS-CoV-2 protein interaction map reveals targets for drug repurposing

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Discovery and functional interrogation of SARS-CoV-2 RNA-host protein interactions

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

In vivo structural characterization of the SARS-CoV-2 RNA genome identifies host proteins vulnerable to repurposed drugs

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

The SARS-CoV-2 RNA interactome

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Recoding: Expansion of Decoding Rules Enriches Gene Expression

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Fast gapped-read alignment with Bowtie 2

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

The zinc-finger antiviral protein recruits the RNA processing exosome to degrade the target mRNA

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

IMPs: an RNA-binding protein family that provides a link between stem cell maintenance in normal development and cancer

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

CDK-regulated dimerization of M18BP1 on a Mis18 hexamer is necessary for CENP-A loading

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

DHX36 enhances RIG-I signaling by facilitating PKR-mediated antiviral stress granule formation

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

TRIM25 Enhances the Antiviral Action of Zinc-Finger Antiviral Protein (ZAP).

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Dedicated surveillance mechanism controls G-quadruplex forming non-coding RNAs in human mitochondria.

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

The ALFA-tag is a highly versatile tool for nanobody-based bioscience applications

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Zinc-finger antiviral protein (ZAP) is a restriction factor for replication of modified vaccinia virus Ankara (MVA) in human cells

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Anti-Frameshifting Ligand Active against SARS Coronavirus-2 Is Resistant to Natural Mutations of the Frameshift-Stimulatory Pseudoknot

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

HIV-1 frameshift efficiency is primarily determined by the stability of base pairs positioned at the mRNA entrance channel of the ribosome

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

IGF2BP1 enhances HCV IRES-mediated translation initiation via the 3'UTR

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

The zinc finger antiviral protein directly binds to specific viral mRNAs through the CCCH zinc finger motifs

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Characterization of the frameshift signal of Edr, a mammalian example of programmed -1 ribosomal frameshifting

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Ribosomal frameshifting in the CCR5 mRNA is regulated by miRNAs and the NMD pathway

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Fiji: an open-source platform for biological-image analysis

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

A novel role for poly(C) binding proteins in programmed ribosomal frameshifting

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Lentivirus-delivered stable gene silencing by RNAi in primary cells

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Programmed -1 frameshifting by kinetic partitioning during impeded translocation

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Characterization of an efficient coronavirus ribosomal frameshifting signal: requirement for an RNA pseudoknot

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Dynamic pathways of -1 translational frameshifting

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Changed in translation: mRNA recoding by -1 programmed ribosomal frameshifting

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

cutPrimers: A New Tool for Accurate Cutting of Primers from Reads of Targeted Next Generation Sequencing

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Identification of a cellular factor that modulates HIV-1 programmed ribosomal frameshifting

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Mammalian GLD-2 homologs are poly(A) polymerases

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Multi-host expression system for recombinant production of challenging proteins.

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

The hnRNP family: insights into their role in health and disease

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Poly(ADP-ribose) polymerase-13 and RNA regulation in immunity and cancer

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Design of the linkers which effectively separate domains of a bifunctional fusion protein.

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Programmed ribosomal frameshifting in decoding the SARS-CoV genome

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Prenylome profiling reveals S-farnesylation is crucial for membrane targeting and antiviral activity of ZAP long-isoform

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

A systematic analysis of the PARP protein family identifies new functions critical for cell physiology.

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Selective Binding to mRNA Duplex Regions by Chemically Modified Peptide Nucleic Acids Stimulates Ribosomal Frameshifting.

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Avoidance of reporter assay distortions from fused dual reporters

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

The PRIDE database and related tools and resources in 2019: improving support for quantification data

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Small synthetic molecule-stabilized RNA pseudoknot as an activator for -1 ribosomal frameshifting

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

La autoantigen is required for the internal ribosome entry site-mediated translation of Coxsackievirus B3 RNA.

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Expression of the zinc-finger antiviral protein inhibits alphavirus replication

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

hnRNPs and ELAVL1 cooperate with uORFs to inhibit protein translation

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Unbiased RNA-protein interaction screen by quantitative proteomics.

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Mobius Assembly: A versatile Golden-Gate framework towards universal DNA assembly.

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Evaluation of the Calu-3 cell line as a model of in vitro respiratory syncytial virus infection

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Protein-directed ribosomal frameshifting temporally regulates gene expression

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

RNA Framework: an all-in-one toolkit for the analysis of RNA structures and post-transcriptional modifications

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

The trinity of COVID-19: immunity, inflammation and intervention

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Structure-Altering Mutations of the SARS-CoV-2 Frame Shifting RNA Element

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Generation of Luciferase-expressing Tumor Cell Lines.

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

ZFAND1 Recruits p97 and the 26S Proteasome to Promote the Clearance of Arsenite-Induced Stress Granules

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Global analysis of protein-RNA interactions in SARS-CoV-2-infected cells reveals key regulators of infection

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Imbalanced Host Response to SARS-CoV-2 Drives Development of COVID-19

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Cryo-EM and antisense targeting of the 28-kDa frameshift stimulation element from the SARS-CoV-2 RNA genome

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

RNA-binding protein isoforms ZAP-S and ZAP-L have distinct antiviral and immune resolution functions

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

KHNYN is essential for the zinc finger antiviral protein (ZAP) to restrict HIV-1 containing clustered CpG dinucleotides

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Molecular Mechanism of RNA Recognition by Zinc-Finger Antiviral Protein

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

The SARS-CoV-2 RNA-protein interactome in infected human cells

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Modulation of Viral Programmed Ribosomal Frameshifting and Stop Codon Readthrough by the Host Restriction Factor Shiftless

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Structural and molecular basis for Cardiovirus 2A protein as a viral gene expression switch

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

POTATO: An automated pipeline for batch analysis of optical tweezers data

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0

Structural dynamics of single SARS-CoV-2 pseudoknot molecules reveal topologically distinct conformers

8 January 2022

1 reference

https://api.crossref.org/works/10.1038/s41467-021-27431-0