User:TiagoLubiana

There you can find me eating vegetarian nipo-brazilian food at WikidataLabXVI (in the pre-pandemic era) and suffering from using single-use plastics

Hello!

I am Tiago, thank you for stopping by.

I have graduated in Biomedical Sciences at the University of São Paulo (2014-2017), and got a MSc in Bioinformatics in the same university (2018-2020). I'm pursuing a PhD on modeling of biomedical concepts related to cell types (grant #19/26284-1, São Paulo Research Foundation) ..

I currently live in Brazil. I am very interested in translating biomedical data into Wikidata format. I have been quite active in the WikiProject COVID-19

You can also find me in GitHub as @lubianat.

Bot accounts

I currently take care of 3 bot accounts:

• User:CellosaurusBot
• User:CovidDatahubBot
• User:ComplexPortalBot

WikiProjects

Some WikiProjects dear to my heart:

• Wikidata:WikiProject COVID-19
• Wikidata:WikiProject Biodiversity
• Wikidata:WikiProject Molecular biology
• Wikidata:WikiProject Human Cells

Show & tell

Babel user information
This user is a property creator on Wikidata. (verify) pt-BR-N Este usuário tem como língua materna o português brasileiro. en-3 This user has advanced knowledge of English. es-3 Este usuario tiene un conocimiento avanzado del español. de-1 Dieser Benutzer beherrscht Deutsch auf grundlegendem Niveau. fr-1 Cet utilisateur dispose de connaissances de base en français. it-1 Questo utente può contribuire con un livello elementare in italiano. This user is a member of WikiProject COVID19. This user is a member of WikiProject Molecular biology. This user uses Scholia.
Users by language

Things that I worked on:

• TopicTagger: a tool to batch tag scientific articles
• QuickLit: a tool to suggest Wikidata edits

• Wikidata Bib:a Wikidata-powered dashboard which shows the stats about what I read for my PhD.
• ANN: A project to annotate biomedical text with Wikidata IDs.
• inat2wiki tool to connect iNaturalist to the Wiki universe.
• WikiORA: a gene over-representation analysis bioinformatics tool based on Wikidata and Wikipedia.
• User:TiagoLubiana/cell-ontology.js, an userscript to connect Wikidata entries to the Cell Ontology

I have not done any work for the tools below, but they are worth sharing:

• This gadget to see who edited each statement and label is incredibly usefulː User:Ricordisamoa/WikidataTrust.js
• Nikki's key shortcuts are also a huge time saver: User:Nikki/KeyShortcuts.js
• These user-friendly tools are really nice to edit Wikidata:
  • Author Disambiguator and other bibliography related tools (see curation by UCLA Library here)
  • Wikidata Art Depiction Explorer to add "depicts" statatements and/or explore works of art.
  • sparql_rc:Get diffs for all items matching a SPARQL query, for a date range
• Toolforge list of Wikidata-related tools

Properties proposed

• entry receptor (P8339)

• Cell Ontology ID (P7963)
• has marker (P8872)
• derived from organism type (P9072)
• facilitates flow of (P10228)
• equivalent in higher rank taxon (P10019)
• Reflora ID (P10701)
• Unidades de Conservação no Brasil ID (P11954)

Things that I do not know much about but I plan to check in the future:

• Wikidata:AddScholarTopics Script

Tips

• By adding ?safemode=1 you can load a page without gadgets/common.css/common.js

Gadget & Tool wishlist

• Foldable statements
• keybinds for adding "instance of" (q) and subclass of (w)
• A good topic tagging tool for scholarly literature
• A Google Slides Add on for embedding Wikidata queries
• A Gadget that links item to the properties used by instances of it

Subpages

• Datasets
• Ideas for properties
• Modeling of RNAs
• Modelling of RNAs
• Property proposal
• Property proposal/entry receptor
• Property proposal/viability on surface
• Queries
• R0
• SPARQL Style Guide
• ShEX for outbreaks
• WikidataPodAI
• Wikidata Integrator
• cell-ontology.js
• common.js
• has marker
• navigation-scholia.js
• quickpresets settings.js
• sandbox
• susceptible
• term in higher taxon

This user has an advanced understanding of the Pywikibot software library.