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Article
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main subject
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uses
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Wikidata property
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1
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MEROPS
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biological database
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peptidase
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MEROPS enzyme ID
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GNU Lesser General Public License
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copyrighted
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2
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IUCN Red List
|
biological database red list
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IUCN taxon ID
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3
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Catalogue of Life
|
biological database website online database
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Catalogue of Life ID
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4
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Long non-coding RNA database
|
biological database
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proprietary license
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copyrighted
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5
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Encyclopedia of Life
|
biological database website online database crowdsourcing
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Encyclopedia of Life ID
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6
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Transporter Classification database
|
biological database open-access repository medical database website free software
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Membrane transport protein
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Transporter Classification Database ID
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Creative Commons Attribution-ShareAlike 3.0 Unported GNU Free Documentation License Creative Commons Attribution-ShareAlike GNU General Public License
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copyrighted
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7
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Online Mendelian Inheritance in Man
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biological database online database organization
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OMIM ID
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proprietary license
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copyrighted
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8
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AnimalBase
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biological database digital library
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animal
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AnimalBase ID
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9
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BRENDA
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biological database ELIXIR Core Data Resource
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proprietary license Creative Commons Attribution 4.0 International
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copyrighted
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10
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Protein Segment Finder
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biological database
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11
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Zebrafish Information Network
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biological database information network
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Danio rerio
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ZFIN Gene ID
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12
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MetaCyc
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biological database chemical database
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proprietary license
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copyrighted
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13
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PROSITE
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biological database online database
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PROSITE and SWISS-PROT: identification of protein function from primary sequence through the development of computational methods and associated databases
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PROSITE documentation ID
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copyrighted
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14
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ExPASy
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biological database software
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15
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UniProt
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biological database online database data library graph database ELIXIR Core Data Resource
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biology Homo sapiens house mouse growth hormone releasing hormone vasoactive intestinal peptide Calcitonin ghrelin Tuberin neurotensin Urotensin 2
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UniProt protein ID UniProt journal ID
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Creative Commons Attribution-NoDerivs 3.0 Unported Creative Commons Attribution 4.0 International
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copyrighted
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16
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Pfam
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biological database
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Pfam ID
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GNU Lesser General Public License
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copyrighted
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17
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Kyoto Encyclopedia of Genes and Genomes
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biological database chemical database
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KEGG ID
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proprietary license
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copyrighted
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18
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Crystallography Open Database
|
biological database chemical database crystallographic database data library open-access repository open science infrastructure
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chemistry Crystal Structures
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COD ID
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Creative Commons CC0 License
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copyrighted, dedicated to the public domain by copyright holder
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19
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Protein Information Resource
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biological database
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20
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International Nucleotide Sequence Database Collaboration
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biological database
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21
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Mouse Genome Informatics
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biological database
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MGI Gene Symbol Mouse Genome Informatics ID
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22
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SABIO-Reaction Kinetics Database
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biological database
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biochemical
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copyrighted
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23
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Search Tool for the Retrieval of Interacting Genes/Proteins
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biological database ELIXIR Core Data Resource
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Creative Commons Attribution 4.0 International
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copyrighted
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24
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Nederlands Soortenregister
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biological database
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Nederlands Soortenregister ID
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25
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TRANSFAC
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biological database
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26
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IntEnz
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biological database
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enzyme activity enzyme chemical reaction nomenclature classification scheme
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27
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InterPro
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biological database
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biology
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28
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FNAEG
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biological database
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proprietary license
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copyrighted
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29
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FlyBase
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biological database
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nucleotide eukaryote genome
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FlyBase Gene ID
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proprietary license
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copyrighted
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30
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SGD
|
biological database service on Internet
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Saccharomyces cerevisiae
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Saccharomyces Genome Database ID
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31
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The Arabidopsis Information Resource
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biological database data library
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Arabidopsis thaliana biology
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The Arabidopsis Information Resource Accession
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32
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Universal Biological Indexer and Organizer
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biological database online database
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uBio ID
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33
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Rfam
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biological database
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RNA
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Rfam ID
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Creative Commons CC0 License
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copyrighted, dedicated to the public domain by copyright holder
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34
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Human proteome project
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biological database research project
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35
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3D-Jury
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biological database
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36
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3DID
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biological database
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protein
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proprietary license
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copyrighted
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37
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AREsite
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biological database
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38
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Allosteric Database (ASD)
|
biological database
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proprietary license
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copyrighted
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39
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AceDB
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biological database
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GNU General Public License GNU Lesser General Public License
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copyrighted
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40
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AgBase
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biological database
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41
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Allele frequency net database
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biological database
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disease
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42
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Allen Brain Atlas
|
biological database
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brain
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free content
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43
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Alternative splicing and transcript diversity database
|
biological database
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44
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Alternative splicing annotation project
|
biological database
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45
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AmoebaDB
|
biological database
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Amoeba genomics
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46
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AnimalTFDB
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biological database
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free content
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47
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Animal Genome Size Database
|
biological database
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genome animal
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proprietary license
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copyrighted
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48
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ArachnoServer
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biological database
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Spider toxin
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49
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Artade
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biological database
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50
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AspicDB
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biological database
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51
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Atlas of UTR Regulatory Activity
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biological database
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52
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Autophagy database
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biological database
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53
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BGMUT
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biological database
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54
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BISC
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biological database
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free content
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55
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BYKdb
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biological database
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proprietary license
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copyrighted
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56
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Bio2RDF
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biological database
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57
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BioGRID
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biological database
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BioGRID ID
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58
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BioModels Database
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biological database software ELIXIR Deposition Database
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Creative Commons CC0 License
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public domain
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59
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BioSamples
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biological database
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free content
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60
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Bionumbers
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biological database
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61
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BitterDB
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biological database
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bitterness
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BitterDB compound ID
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62
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Bovine genome database
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biological database
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63
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Brix
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biological database
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64
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CATH
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biological database medical database ELIXIR Core Data Resource
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protein structure
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Creative Commons Attribution 4.0 International
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copyrighted
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65
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CLIPZ
|
biological database
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66
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CaSNP
|
biological database
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proprietary license
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copyrighted
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67
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CancerResource
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biological database
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68
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Catfish genome database
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biological database
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69
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Cervical cancer gene database
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biological database
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70
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The Lipase Engineering Database
|
biological database
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71
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ChemProt
|
biological database chemical database
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proprietary license
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copyrighted
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72
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ChimerDB
|
biological database
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73
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Ciliate MDS/IES database
|
biological database
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74
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Ciona intestinalis protein database
|
biological database
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75
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Colocalization Benchmark Source
|
biological database
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Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported
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copyrighted
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76
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LOX-DB - LipOXygenases DataBase
|
biological database
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77
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Compendium of protein lysine acetylation
|
biological database
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78
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Conformational dynamics data bank
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biological database
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79
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ConoServer-database for conopeptides
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biological database
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80
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ConsensusPathDB
|
biological database
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human protein
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81
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Consensus CDS Project
|
biological database
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consensus sequence
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82
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Conserved Domain Database
|
biological database
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83
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DAnCER
|
biological database
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proprietary license
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copyrighted
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84
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DBASS3/5
|
biological database
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85
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DBTSS
|
biological database
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RNA
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proprietary license
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copyrighted
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86
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DIMA
|
biological database
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87
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Database for bacterial group II introns
|
biological database
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Group II intron bacterial DNA
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88
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Database of Interacting Proteins
|
biological database
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Creative Commons Attribution-NoDerivs 3.0 Unported
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89
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dbCRID
|
biological database
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90
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DbDNV
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biological database
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91
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dbSNP
|
biological database
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dbSNP Reference SNP number
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92
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Defensins Knowledgebase
|
biological database
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93
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Department of Defense Serum Repository
|
biological database
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94
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DiProDB
|
biological database
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proprietary license
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copyrighted
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95
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dictyBase
|
biological database
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Dictyostelium discoideum
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96
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DisProt
|
biological database
|
protein intrinsically unstructured proteins
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|
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Creative Commons Attribution 4.0 International
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copyrighted
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97
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Domine Database
|
biological database
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proprietary license
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copyrighted
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98
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ECRbase
|
biological database
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99
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ECgene
|
biological database
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proprietary license
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copyrighted
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100
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EDAS
|
biological database
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101
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EDRN
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biological database
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proprietary license
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copyrighted
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102
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EMAGE
|
biological database
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103
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Electron Microscopy Data Bank
|
biological database
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104
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eggNOG
|
biological database
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Creative Commons Attribution 4.0 International
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copyrighted
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105
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Ensembl Genomes
|
biological database
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free content
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106
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European Nucleotide Archive
|
biological database
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proprietary license
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copyrighted
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107
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ExoCarta
|
biological database
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108
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exon-intron database
|
biological database
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109
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FINDbase
|
biological database
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disease
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110
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FREP
|
biological database
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111
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Families of structurally similar proteins
|
biological database
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112
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Florida Shorebird Database
|
biological database
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113
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FlyFactorSurvey
|
biological database
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Drosophila melanogaster Bacterial one-hybrid system
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114
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Full-parasites
|
biological database
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115
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Functional element SNPs database
|
biological database
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116
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Fusarium graminearum genome database
|
biological database
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Fusarium graminearum
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117
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GDB Human Genome Database
|
biological database
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118
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GEN2PHEN
|
biological database
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proprietary license
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copyrighted
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119
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GENCODE
|
biological database
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proprietary license
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copyrighted
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120
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GISSD
|
biological database
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Group I catalytic intron
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121
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GWASdb
|
biological database
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122
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G protein-coupled receptors database
|
biological database
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123
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GeneDB
|
biological database
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genome prokaryotes fungus
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GeneDB ID
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124
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GeneCards
|
biological database
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gene
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125
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Generation Scotland
|
biological database
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126
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Genetic codes
|
biological database
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genetics
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public domain
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127
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Genomes OnLine Database
|
biological database
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metagenome genome
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128
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global microbial identifier
|
biological database
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129
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GlycomeDB
|
biological database
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glycan glycome
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proprietary license
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copyrighted
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130
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H-Invitational
|
biological database
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131
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HIV Drug Resistance Database
|
biological database
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132
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HIstome
|
biological database
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133
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HitPredict
|
biological database
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134
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Hollywood
|
biological database
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RNA
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proprietary license
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copyrighted
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135
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HumHot
|
biological database
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136
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Human Metabolome Database
|
biological database
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Homo sapiens metabolite
|
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Human Metabolome Database ID
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137
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Human Protein Reference Database
|
biological database
|
protein
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138
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Human Protein Atlas
|
biological database ELIXIR Core Data Resource
|
|
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Creative Commons Attribution-ShareAlike 3.0 Unported
|
copyrighted
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139
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Hymenoptera Genome Database
|
biological database
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Hymenoptera
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140
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IBIS
|
biological database
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141
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IGRhCellID
|
biological database
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human cell line
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142
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iRefIndex
|
biological database
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143
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InSatDb
|
biological database
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insect microsatellite
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proprietary license
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copyrighted
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144
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Indian Genetic Disease Database
|
biological database
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145
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Integrated Microbial Genomes System
|
biological database
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genome metagenome
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|
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146
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Interferome
|
biological database
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gene disease
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proprietary license
|
copyrighted
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147
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International Protein Index
|
biological database
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148
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Islander
|
biological database
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mobile genetic element
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149
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IsoBase
|
biological database
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150
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KaPPA-View4
|
biological database
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151
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L1Base
|
biological database
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LINE1
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proprietary license
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copyrighted
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152
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Laminin database
|
biological database
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153
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LarvalBase
|
biological database
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154
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Legume Information System
|
biological database
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155
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LocDB
|
biological database
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proprietary license
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copyrighted
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156
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MANET database
|
biological database
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proprietary license
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copyrighted
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157
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MICdb
|
biological database
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158
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MINAS
|
biological database
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nucleic acids
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proprietary license
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copyrighted
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159
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Mammalian promoter database
|
biological database
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160
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Mantis database
|
biological database
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161
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Mapper(2)
|
biological database
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162
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MatrixDB
|
biological database
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163
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MethDB
|
biological database
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164
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miRBase
|
biological database
|
microRNA
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miRBase mature miRNA ID miRBase pre-miRNA ID
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165
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MiRGator
|
biological database
|
microRNA
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|
|
proprietary license
|
copyrighted
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166
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MiRNEST 2.0
|
biological database
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microRNA
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167
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MiRTarBase
|
biological database
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mirTarBase ID
|
proprietary license
|
copyrighted
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168
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MicroRNA and microRNA target database
|
biological database
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169
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Microarray databases
|
biological database
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170
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MicrobesOnline
|
biological database
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comparative genomics
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proprietary license
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copyrighted
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171
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DoBISCUIT
|
biological database
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172
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gpDB: a database of GPCRs, G-proteins, Effectors and their interactions
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biological database
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173
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ModBase
|
biological database
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protein structure
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174
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MOPED
|
biological database
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175
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Mouse Genome Database
|
biological database
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176
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Mouse Phenome Database
|
biological database
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177
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Mouse gene expression database
|
biological database
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178
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NAPP
|
biological database
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RNA
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179
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NCBI Epigenomics
|
biological database
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180
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NGSmethDB
|
biological database
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proprietary license
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copyrighted
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181
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NIAID ChemDB
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biological database
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NIAID ChemDB ID
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182
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NONCODE
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biological database
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183
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National Biodiversity Network
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biological database online database
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NBN System Key
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184
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neXtProt
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biological database online database website
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Creative Commons Attribution-NoDerivs 3.0 Unported
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185
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Netherlands Bioinformatics for Proteomics Platform
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biological database
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186
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Non-B database
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biological database
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187
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Nuclear Receptor Signaling Atlas
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biological database
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188
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Nucleosome positioning region database
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biological database
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189
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OMPdb
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biological database
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190
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Open Regulatory Annotation Database
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biological database
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191
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TOPSAN
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biological database
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protein structure
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192
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Operon database
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biological database
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operon
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193
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OriDB
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biological database
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DNA Saccharomyces cerevisiae
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proprietary license
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copyrighted
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194
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OPM
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biological database
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transmembrane protein
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195
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OrthoDB
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biological database
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Creative Commons Attribution 3.0 Unported
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copyrighted
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196
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Orthologous MAtrix
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biological database
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197
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PANDIT
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biological database
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GNU Lesser General Public License, version 2.1
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copyrighted
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198
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PATRIC
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biological database
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199
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PCRPi-DB
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biological database
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protein
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200
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PDBbind database
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biological database
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201
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PDBsum
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biological database
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protein structure schematic diagram
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Protein Data Bank
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202
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PHI-base
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biological database
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203
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PRINTS
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biological database
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204
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PSORTdb
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biological database
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205
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Pathema
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biological database
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206
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Pathway Commons
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biological database
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GNU Lesser General Public License, version 3.0
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copyrighted
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207
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Patome
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biological database
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208
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PeroxiBase
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biological database
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209
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Peroxiredoxin classification index
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biological database
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210
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PhEVER
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biological database
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horizontal gene transfer phylogenetics
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211
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PhenomicDB
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biological database
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212
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Phosida
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biological database
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213
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Phospho3D
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biological database
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214
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PhosphoSitePlus
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biological database
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215
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PhylomeDB
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biological database
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216
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PhytoPath
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biological database
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plant pathogen
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217
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PlantCollections
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biological database
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218
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Plant DNA C-values Database
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biological database
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219
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PPDB
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biological database
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220
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Plasmapper
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biological database
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221
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PmiRKB
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biological database
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222
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Polbase
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biological database
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223
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KIDFamMap: Kinase-inhibitor-disease family map
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biological database
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224
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PolymiRTS
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biological database
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225
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Polymorphic simple sequence repeats database
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biological database
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226
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ProGlycProt
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biological database
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227
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ProRepeat
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biological database
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228
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ProSAS
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biological database
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229
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ProtCID
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biological database
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230
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Protein-RNA interface database
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biological database
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231
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Protein Circular Dichroism Data Bank
|
biological database
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circular dichroism synchrotron radiation
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232
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Proteomics Identifications Database
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biological database ELIXIR Deposition Database ELIXIR Core Data Resource
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233
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Pseudogene
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biological database
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pseudogene
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234
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Pseudomonas Genome Database
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biological database
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microbiology Pseudomonas aeruginosa PAO1
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235
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REDfly
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biological database
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236
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REPAIRtoire
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biological database
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237
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RIKEN integrated database of mammals
|
biological database
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mammal
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Creative Commons Attribution-ShareAlike 4.0 International
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238
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RNA-binding protein database
|
biological database
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239
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RNA CoSSMos
|
biological database
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240
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RNA helicase database
|
biological database
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proprietary license
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copyrighted
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241
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RNA modification database
|
biological database
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RNA
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242
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Rat genome database
|
biological database
|
laboratory rat
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Rat Genome Database ID
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243
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REBASE
|
biological database
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REBASE Enzyme Number
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244
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Recode
|
biological database
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245
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RefSeq
|
biological database
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nucleotide genomics protein transcription
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RefSeq protein ID RefSeq RefSeq RNA ID RefSeq genome ID
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246
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RegTransBase
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biological database
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247
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RegulonDB
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biological database
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248
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RepTar
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biological database
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microRNA
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249
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RetrOryza
|
biological database
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250
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S/MARt
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biological database
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proprietary license
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copyrighted
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251
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SCRIPDB
|
biological database
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chemical structure
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252
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SHIFTCOR
|
biological database software
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253
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Superfamily
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biological database
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protein structure
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254
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ScerTF
|
biological database
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Saccharomyces transcription factor
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255
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SeaLifeBase
|
biological database online database global species database
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SeaLifeBase ID
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256
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Sequence Read Archive
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biological database
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257
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Signaling Gateway
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biological database
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258
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Snptstr
|
biological database
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259
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Spike
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biological database
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260
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SpliceInfo
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biological database
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261
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StarBase
|
biological database
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RNA-binding proteins interactome
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262
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Stem cell lineage database
|
biological database
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263
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Strbase
|
biological database
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264
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Structure atlas of human genome
|
biological database
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265
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SuperSweet
|
biological database
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sweetener
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266
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Synthetic gene database
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biological database
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gene
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267
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Systematic Protein Investigative Research Environment
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biological database
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268
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TDR Targets
|
biological database
|
pathogen tropical disease
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269
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TIARA
|
biological database
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270
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TIGRFAMs
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biological database
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271
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TIGR plant repeat database
|
biological database
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272
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TIGR plant transcript assembly database
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biological database
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273
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KnotProt
|
biological database
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274
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TOXMAP
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biological database
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275
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tRNADB-CE
|
biological database
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transfer RNA
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276
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Tandem Repeats Database
|
biological database
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DNA
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277
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TassDB
|
biological database
|
gene
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278
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TcoF-DB
|
biological database
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DNA transcription
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279
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ThYme
|
biological database
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280
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The Global Lepidoptera Names Index
|
biological database online database
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LepIndex ID
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281
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The Proteolysis Map
|
biological database software
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282
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Small Molecule Pathway Database
|
biological database
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283
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TopFIND
|
biological database software
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284
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Toxin-antitoxin database
|
biological database
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proprietary license
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copyrighted
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285
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Transient receptor potential channel-interacting protein database
|
biological database
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286
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Transpogene
|
biological database
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287
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Transterm
|
biological database
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288
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U12 intron database
|
biological database
|
genome
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|
|
GNU General Public License
|
copyrighted
|
289
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UCbase
|
biological database
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290
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UK Biobank
|
biological database research project
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291
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UTRdb
|
biological database
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292
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UTRome
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biological database
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293
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UgMicroSatdb
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biological database
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294
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UniGene
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biological database
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public domain
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295
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UniPROBE
|
biological database
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296
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Univec
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biological database
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nucleic acids gene
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297
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VIRsiRNAdb
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biological database
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small interfering RNA Small hairpin RNA
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298
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VISTA
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biological database
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299
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VectorBase
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biological database
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vector pathogen
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300
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VectorDB
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biological database
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molecular biology
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301
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Vertebrate and Genome Annotation Project
|
biological database
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302
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Viral Bioinformatics Resource Center
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biological database
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viral genome
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303
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Voltage-gated potassium channel database
|
biological database
|
eukaryote bacteria Archaea potassium
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304
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WebGeSTer
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biological database
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genome
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305
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WikiPathways
|
biological database database ELIXIR Node Service scientific community
|
biological pathway metabolite gene product biological network Gibberella zeae brown rat house mouse Escherichia coli Homo sapiens 6-HITC sn-glycerol 3-phosphate(2-) IP3 N-acetyl-L-aspartate cyclopamine nocodazole norcodeine (stereochemistry defined) 4'-hydroxydiclofenac tamoxifen N-beta-D-glucosiduronic acid m-hydroxybenzoylecgonine o-tolualdehyde (32RS)-rapamycin 1,2-dichloroethene Prostacyclin (not favourable) citric acid 5-(3'-carboxy-3'-oxopropyl) -4,6-dihydroxypicolinate 3-Hydroxylidocaine 4-(2-amino-5-hydroxyphenyl) -2,4-dioxobutanoate (S)-sulindac 2-(Diaminomethylideneamino)-2-phosphonoacetate(1-) aflatoxin Q1 5-methyltetrahydrofolate(2-) Pinoline N-acetylglutamate alpha-Hydroxy-N-desmethyltamoxifen 6-Sulphatoxymelatonin coenzyme A 5-hydroxyindoleacetate bleomycin A2 (incomplete stereochemistry) 2-(N-Hydroxy-2,6-dichloroanilino)-5-hydroxybenzeneacetic acid GQ1c Plicamycin FADH2 (2-) 4-Methoxyestrone acetoacetate (S)-(−)-colchicine GT3 CDP-ethanolamine Benzo[a]pyrene-7-sulfate (E)-endoxifen cytochalasin B 12-O-tetradecanoylphorbol-13-acetate deoxyuridine monophosphate indolepyruvate 5-hydroxyindolepyruvate phosphocholine cation GT1a guanosine cyclic 3',5'-phosphate 5-hydroxy-N-formylkynurenine trichotriol 3-(6-methylpyridin-2-yl)-N-phenyl-4-quinolin-4-ylpyrazole-1-carbothioamide pd-168393 aflatoxin M1 silibinin A cyclosporine Benzo[a]pyrene-1,6-dione lysophosphatidic acid docosanoyl-CoA 17beta-estradiol 17-glucosiduronic acid DL-serine hydron cortisol
|
The Bioregistry
|
WikiPathways ID
|
Creative Commons CC0 License
|
public domain
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306
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Xenbase
|
biological database website
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Xenopus frog genome
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307
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YeTFaSCo
|
biological database
|
transcription factor Saccharomyces cerevisiae
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308
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Yeast deletion project
|
biological database
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309
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Yeast Promoter Atlas
|
biological database
|
promoter yeast Saccharomyces cerevisiae
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310
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Yeastract
|
biological database
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311
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Neuroscience Information Framework
|
biological database
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312
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MODOMICS
|
biological database
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313
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Species Nomenclature Database
|
biological database
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NBIC taxon ID
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314
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Pomet
|
biological database
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315
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Simple Modular Architecture Research Tool
|
biological database
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Simple Modular Architecture Research Tool ID
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|
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316
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National Forensic DNA Database of South Africa
|
biological database
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317
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MMDB
|
biological database
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biomolecular structure
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|
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318
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PATH Biobank
|
biological database
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319
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BNAber
|
biological database software
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320
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EzTaxon Database
|
biological database
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321
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Human Proteinpedia
|
biological database
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322
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Leiden Open Variation Database
|
biological database
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|
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|
GNU General Public License, version 3.0
|
copyrighted
|
323
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Identifiers.org
|
biological database URL redirection service
|
identifier
|
|
identifiers.org prefix
|
proprietary license
|
copyrighted
|
324
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Online Mendelian Inheritance in Animals
|
biological database
|
Mendelian inheritance
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|
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325
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TreeFam
|
biological database
|
phylogenetic tree
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|
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326
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Eurocarbdb
|
biological database
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327
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Human-transcriptome database for alternative splicing
|
biological database
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328
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Inparanoid
|
biological database algorithm
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329
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International Knockout Mouse Consortium
|
biological database
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330
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International Mouse Phenotyping Consortium
|
biological database
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331
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Intronerator
|
biological database
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332
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mESAdb
|
biological database
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microRNA
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333
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MIPModDB
|
biological database
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334
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NCI-Nature Pathway Interaction Database
|
biological database
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335
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Netpath
|
biological database
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|
Creative Commons license
|
copyrighted
|
336
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NucleaRDB
|
biological database
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337
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PANTHER
|
biological database
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338
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Phospho.ELM
|
biological database
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339
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Popgenie
|
biological database
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340
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CyberCell
|
biological database
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341
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Serum Metabolome Database
|
biological database
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342
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PPT-DB
|
biological database
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343
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Barcode of Life Data Systems
|
biological database online database website web application
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|
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344
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DB-ALM
|
biological database
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345
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European Pollen Database
|
biological database
|
pollen
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|
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346
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COMBINE
|
biological database
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347
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dcGO
|
biological database
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Gene Ontology protein domain
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|
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348
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Mouse Genetics Project
|
biological database
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349
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Biometrics use by the South African government
|
biological database
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350
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BASys
|
biological database
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351
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Bovine Metabolome Database
|
biological database
|
|
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352
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Bangladesh Fisheries Information Share Home
|
biological database open-access publisher
|
|
|
|
Creative Commons Attribution-NonCommercial
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|
353
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Golm Metabolome Database
|
biological database
|
|
|
|
proprietary license
|
copyrighted
|
354
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Phenol-Explorer
|
biological database
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|
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|
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355
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CARTaGENE biobank
|
biological database
|
|
|
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356
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E. Coli Metabolome Database
|
biological database
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357
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Influenza Research Database
|
biological database
|
|
|
|
|
|
358
|
Paleobiology Database
|
biological database online database data library
|
paleontology
|
|
Paleobiology Database ID
|
Creative Commons Attribution 4.0 International
|
copyrighted
|
359
|
PROSESS
|
biological database
|
|
|
|
|
|
360
|
RefDB
|
biological database software
|
|
|
|
|
|
361
|
ROCCET
|
biological database
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|
|
|
|
|
362
|
BacMap
|
biological database
|
genome bacteria
|
|
|
free content
|
|
363
|
CGView
|
biological database
|
|
|
|
|
|
364
|
CollecTF
|
biological database
|
transcription factor
|
|
|
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|
365
|
Y Chromosome Haplotype Reference Database
|
biological database
|
Y chromosome haplotype
|
|
|
|
|
366
|
YMDB
|
biological database
|
|
|
|
|
|
367
|
IUPHAR/BPS Guide to PHARMACOLOGY
|
biological database
|
Michaelis constant protein drug brown rat Homo sapiens house mouse angiotensin I
|
Chemistry Development Kit
|
Guide to Pharmacology Ligand ID Guide to Pharmacology Target ID
|
Creative Commons Attribution-ShareAlike 4.0 International
|
|
368
|
Human Olfactory Data Explorer
|
biological database
|
|
|
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369
|
MetaboAnalyst
|
biological database
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|
|
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370
|
VetBact
|
biological database
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|
|
|
371
|
PANAV
|
biological database
|
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|
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|
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372
|
Competing endogenous RNA (ceRNA) databases and resources
|
biological database
|
|
|
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373
|
PREDITOR
|
biological database
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|
|
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|
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374
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MetPA
|
biological database
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|
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|
|
375
|
Resolution by Proxy
|
biological database
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|
|
|
|
|
376
|
MetaboMiner
|
biological database
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|
|
|
|
|
377
|
Proteome Analyst
|
biological database
|
|
|
|
|
|
378
|
Homology-derived Secondary Structure of Proteins
|
biological database
|
|
|
|
|
|
379
|
METAGENassist
|
biological database
|
|
|
|
|
|
380
|
ShiftX
|
biological database
|
|
|
|
|
|
381
|
SuperPose
|
biological database
|
|
|
|
|
|
382
|
TargetScan
|
biological database
|
human
|
|
|
|
|
383
|
EPD Eukaryotic Promoter Database
|
biological database
|
|
|
|
|
|
384
|
SILVA ribosomal RNA database
|
biological database research project ELIXIR Core Data Resource
|
ribosomal RNA
|
|
|
|
|
385
|
PharmGKB
|
biological database
|
|
|
PharmGKB ID
|
|
|
386
|
Volume Area Dihedral Angle Reporter
|
biological database
|
|
|
|
|
|
387
|
Libro Rojo de Uzbekistán
|
biological database
|
|
|
|
|
|
388
|
Database of Vascular Plants of Canada
|
biological database
|
|
|
VASCAN ID
|
|
|
389
|
NCBI Gene
|
biological database
|
|
|
Entrez Gene ID
|
|
|
390
|
Avibase
|
biological database global species database online database
|
|
|
Avibase ID
|
|
|
391
|
Species+
|
biological database online database
|
|
|
CITES Species+ ID
|
|
|
392
|
FANTOM
|
biological database consortium
|
|
|
|
|
|
393
|
Physiotherapy Evidence Database
|
biological database
|
|
|
|
|
|
394
|
Phenocarta
|
biological database
|
|
|
genetic association
|
Creative Commons Attribution-ShareAlike 3.0 Unported
|
|
395
|
Expression Atlas
|
biological database
|
|
|
|
Creative Commons Attribution 4.0 International
|
copyrighted
|
396
|
CaribHerp
|
biological database online database image database bibliographic database website web portal
|
Amphibia Reptilia Caribbean
|
|
|
|
copyrighted
|
397
|
OpenNeuro
|
biological database data library online database
|
|
|
|
Public Domain Dedication and License v1.0 Esquiress Lyndsey Watson Copyright Dockets copyright © ls
|
copyrighted, dedicated to the public domain by copyright holder
|
398
|
XMetDB
|
biological database
|
|
|
|
Creative Commons license
|
copyrighted
|
399
|
Encyclopedia of DNA Elements at UCSC
|
biological database
|
|
|
|
proprietary license
|
copyrighted
|
400
|
UniChem
|
biological database chemical database
|
|
|
UniChem compound ID
|
Creative Commons Attribution
|
copyrighted
|
401
|
MetaboLights
|
biological database
|
|
|
MetaboLights Compound ID
|
free content
|
|
402
|
Ribosomal Mutation Database
|
biological database
|
ribosome mutation
|
|
|
|
|
403
|
eNanoMapper
|
biological database chemical database online database
|
|
|
|
free content proprietary license
|
copyrighted
|
404
|
UM-BBD Reaction
|
biological database
|
|
|
|
proprietary license
|
copyrighted
|
405
|
GreeNC
|
biological database
|
long non-coding RNA
|
|
|
|
|
406
|
Bacterial Small Regulatory RNA Database
|
biological database
|
transfer RNA
|
|
|
Open Database License
|
copyrighted
|
407
|
PATRIC
|
biological database
|
Pathosystem bioinformatics bacterial infectious disease
|
|
|
proprietary license
|
copyrighted
|
408
|
Rhea
|
biological database chemical database ELIXIR Core Data Resource
|
|
|
|
|
|
409
|
SuperCYP
|
biological database
|
|
|
|
|
|
410
|
BARCdb
|
biological database project
|
|
|
|
free content
|
|
411
|
caNanoLab
|
biological database
|
|
|
|
free content
|
|
412
|
Nanomaterial Registry
|
biological database
|
|
|
|
|
|
413
|
BiGG Models
|
biological database
|
|
|
|
|
|
414
|
STITCH
|
biological database
|
|
|
|
proprietary license
|
copyrighted
|
415
|
diXa Data Warehouse
|
biological database
|
|
|
|
|
|
416
|
RettBASE
|
biological database genotype-phenotype distinction
|
|
|
|
|
|
417
|
The Japanese Genotype-phenotype Archive
|
biological database
|
|
|
|
proprietary license
|
copyrighted
|
418
|
euL1db
|
biological database
|
human retrotransposon disease polymorphism
|
|
|
free content
|
|
419
|
Islander Database of Genomic Islands
|
biological database
|
|
|
|
proprietary license
|
copyrighted
|
420
|
MethBank
|
biological database
|
|
|
|
proprietary license
|
copyrighted
|
421
|
Cellosaurus
|
biological database website ELIXIR Core Data Resource online database
|
cell line cell biology biotechnology
|
|
Cellosaurus ID
|
Creative Commons Attribution 4.0 International
|
copyrighted
|
422
|
BioCarta
|
biological database
|
|
|
|
|
|
423
|
CeCaFDB
|
biological database
|
|
|
|
proprietary license
|
copyrighted
|
424
|
Library of Apicomplexan Metabolic Pathways
|
biological database
|
|
|
|
free content
|
|
425
|
Metabolomics Workbench
|
biological database
|
|
|
|
|
|
426
|
PeroxisomeDB
|
biological database
|
peroxisome
|
|
|
|
|
427
|
JASPAR
|
biological database
|
transcription factor DNA
|
|
|
open access
|
|
428
|
FunCat
|
biological database
|
|
|
|
proprietary license
|
copyrighted
|
429
|
ZINC15
|
biological database chemical database
|
|
|
|
proprietary license
|
copyrighted
|
430
|
PeptideAtlas
|
biological database
|
|
|
|
|
|
431
|
100,000 Genomes Project
|
biological database
|
|
|
|
|
|
432
|
RMBase
|
biological database
|
RNA
|
|
|
|
|
433
|
Network of Cancer Genes
|
biological database
|
|
|
|
|
|
434
|
PomBase
|
biological database model organism database online database
|
Schizosaccharomyces pombe cell biology genetics
|
|
PomBase systematic ID
|
Creative Commons Attribution 4.0 International
|
copyrighted
|
435
|
MitoAge
|
biological database
|
|
|
|
Creative Commons license
|
copyrighted
|
436
|
Catalogue of Life in Taiwan
|
biological database online database
|
|
|
Catalogue of Life in Taiwan ID (old version) TaiCOL ID (new version)
|
Creative Commons Attribution 4.0 International Creative Commons Attribution 2.5 Generic
|
copyrighted
|
437
|
WikiGenomes
|
biological database Wikidata front end open science tool
|
gene
|
|
|
|
|
438
|
ENZYME
|
biological database online database
|
nomenclature classification scheme
|
|
|
|
|
439
|
South African Natural Compounds Database
|
biological database chemical database
|
|
|
|
|
|
440
|
BridgeDb Webservices
|
biological database
|
|
|
|
|
|
441
|
Open PHACTS Discovery Platform
|
biological database chemical database
|
drug discovery
|
|
|
|
|
442
|
Gramene
|
biological database
|
|
|
|
|
|
443
|
CIViC database
|
biological database medical database crowdsourcing data
|
|
|
CIViC variant ID CIViC gene ID
|
Creative Commons CC0 License
|
public domain
|
444
|
Butterflies and Moths of the World
|
biological database online database
|
|
|
ButMoth ID
|
|
|
445
|
IntAct protein interaction database
|
biological database ELIXIR Core Data Resource
|
|
|
|
Creative Commons Attribution 4.0 International
|
copyrighted
|
446
|
kPath
|
biological database
|
|
|
|
|
|
447
|
Ensembl Plants
|
biological database
|
|
|
|
|
|
448
|
GO Central
|
biological database
|
|
|
|
|
|
449
|
Community Assessment of Community Annotation with Ontologies
|
biological database
|
|
|
|
|
|
450
|
Parkinsons Disease Gene Ontology Initiative
|
biological database
|
|
|
|
|
|
451
|
OpenTrials
|
biological database data library
|
medicine
|
|
|
Creative Commons CC0 License
|
public domain
|
452
|
GOA
|
biological database
|
Gene Ontology
|
|
|
|
|
453
|
Alzheimers Project at University of Toronto
|
biological database
|
|
|
|
|
|
454
|
Developmental FunctionaL Annotation at Tufts
|
biological database
|
|
|
|
|
|
455
|
LifeDB
|
biological database
|
|
|
|
|
|
456
|
Proteome Inc.
|
biological database
|
|
|
|
|
|
457
|
Syscilia
|
biological database
|
|
|
|
|
|
458
|
MobiDB
|
biological database
|
|
|
|
|
|
459
|
HistoneDB 2.0
|
biological database
|
|
|
|
|
|
460
|
European Genome-Phenome Archive
|
biological database ELIXIR Core Data Resource
|
|
|
|
|
|
461
|
Euro+Med PlantBase
|
biological database online database
|
botany
|
|
Euro+Med PlantBase taxon ID
|
|
|
462
|
Critical Assessment of Protein Function Annotation
|
biological database
|
|
|
|
|
|
463
|
Gemina data model
|
biological database data model
|
|
|
|
Creative Commons CC0 License
|
public domain
|
464
|
Protein Research Foundation
|
biological database organization
|
|
|
|
|
|
465
|
Carbohydrate Structure Database
|
biological database
|
glycoconjugate glycan
|
|
|
|
|
466
|
BioPlex
|
biological database
|
|
|
|
|
|
467
|
The Monarch Initiative
|
biological database
|
|
|
|
|
|
468
|
Cancer Biomarkers database
|
biological database
|
|
|
|
Creative Commons CC0 License
|
public domain
|
469
|
MyVariant.info
|
biological database web service
|
|
|
|
Apache License, Version 2.0
|
copyrighted
|
470
|
SwissLipids
|
biological database
|
lipid
|
|
SwissLipids ID
|
Creative Commons Attribution 4.0 International
|
|
471
|
Echinobase
|
biological database sequence database
|
Echinodermata genomics
|
|
|
|
|
472
|
The IUCN Red List of Threatened Species 2017.3
|
biological database
|
|
|
|
|
|
473
|
Complex Portal
|
biological database
|
protein-containing complex
|
|
Complex Portal accession ID
|
|
|
474
|
AmphibiaWeb
|
biological database online database image database website web portal
|
biological classification Amphibia worldwide conservation biology taxonomy
|
|
AmphibiaWeb Species ID
|
Creative Commons Attribution-NonCommercial
|
copyrighted, dedicated to the public domain by copyright holder
|
475
|
Plants of the World Online
|
biological database online database taxonomic database website
|
plant
|
|
Plants of the World Online ID
|
|
|
476
|
Phasmida Species File
|
biological database online database
|
|
|
Phasmida Species File ID
|
|
|
477
|
DNAtraffic
|
biological database
|
|
|
|
|
|
478
|
CATH-Gene3D
|
biological database
|
|
|
|
|
|
479
|
TreatmentBank
|
biological database
|
taxonomic treatment
|
|
|
|
|
480
|
Bgee
|
biological database online database
|
|
|
|
Creative Commons CC0 License
|
copyrighted, dedicated to the public domain by copyright holder
|
481
|
Membranome database
|
biological database
|
|
|
|
|
|
482
|
RCSB protein data bank
|
biological database data library
|
biology medicine
|
|
|
|
|
483
|
PDBe
|
biological database ELIXIR Core Data Resource
|
|
|
|
|
|
484
|
PDBj
|
biological database
|
protein structure
|
|
|
|
|
485
|
Morphbank
|
biological database
|
|
|
|
|
|
486
|
Soybase
|
biological database
|
|
|
|
|
|
487
|
Legume Information System
|
biological database
|
|
|
|
|
|
488
|
PeanutBase
|
biological database
|
|
|
|
|
|
489
|
MaizeGDB
|
biological database
|
plant genome
|
|
|
|
|
490
|
PlantGDB
|
biological database
|
plant genomics
|
|
|
|
|
491
|
Hymenoptera Online
|
biological database online database
|
|
|
Hymenoptera Online taxon ID
|
|
|
492
|
Species at risk public registry
|
biological database
|
|
|
Species at Risk public registry ID
|
|
|
493
|
Wild Herps
|
biological database online database
|
|
|
Wild Herps ID
|
|
|
494
|
Sea Slug Forum
|
biological database online database
|
|
|
Sea Slug Forum ID
|
|
|
495
|
Orthoptera Species File
|
biological database online database
|
|
|
Orthoptera Species File ID
|
|
|
496
|
Echinoid Directory
|
biological database online database
|
|
|
Echinoid Directory ID
|
|
|
497
|
FEIS
|
biological database online database
|
|
|
FEIS ID
|
|
|
498
|
NOAA Fisheries Species Directory
|
biological database online database
|
|
|
NOAA Fisheries Species Directory ID
|
|
|
499
|
Les Espèces exotiques envahissantes en outre-mer
|
biological database online database
|
|
|
Espèces Envahissantes Outre-mer ID
|
|
|
500
|
Mantodea Species File
|
biological database online database
|
|
|
Mantodea Species File ID
|
|
|
501
|
Coreoidea Species File
|
biological database online database
|
|
|
Coreoidea Species File ID
|
|
|
502
|
Cockroach Species File
|
biological database online database
|
|
|
Cockroach Species File ID
|
|
|
503
|
Red List of South African Plants
|
biological database online database classification scheme red list
|
|
|
Red List of South African Plants ID
|
|
|
504
|
AfroMoths
|
biological database online database
|
|
|
AfroMoths ID
|
|
|
505
|
Botanischer Informationsknoten Bayern
|
biological database online database
|
|
|
|
|
|
506
|
Info Flora
|
biological database online database
|
|
|
Info Flora ID
|
|
|
507
|
Fulgoromorpha Lists On the Web
|
biological database online database
|
|
|
FLOW ID
|
|
|
508
|
Mitochondrial Disease Database
|
biological database
|
|
|
|
|
|
509
|
Michigan Flora
|
biological database online database
|
|
|
Michigan Flora ID
|
|
|
510
|
Central African Plants
|
biological database online database
|
flora plant Rubiaceae Balsaminaceae Orchidaceae
|
|
Central African Plants ID
|
|
copyrighted
|
511
|
Portal to the Flora of Italy
|
biological database online database
|
|
|
Portal to the Flora of Italy ID
|
|
|
512
|
Threatened Species Link
|
biological database online database
|
|
|
Threatened Species Link ID
|
|
|
513
|
Kansas Wildflowers & Grasses
|
biological database online database
|
|
|
|
|
|
514
|
Alabama Plant Atlas
|
biological database online database website
|
flora plant
|
|
Alabama Plant Atlas ID
|
|
|
515
|
BiolFlor
|
biological database online database
|
|
|
|
|
|
516
|
Virtual Guide to the Flora of Mongolia
|
biological database online database
|
|
|
Virtual Guide to the Flora of Mongolia ID
|
|
|
517
|
Nonindigenous Aquatic Species
|
biological database online database
|
|
|
NAS ID
|
|
|
518
|
Invasive Plant Atlas of the United States
|
biological database online database
|
|
|
Invasive Plant Atlas of the United States ID
|
|
|
519
|
eFloraSA
|
biological database
|
|
|
eFloraSA ID
|
|
|
520
|
SEINet
|
biological database online database
|
|
|
SEINet ID
|
|
|
521
|
Weeds in Ontario
|
biological database online database
|
|
|
Weeds in Ontario ID
|
|
|
522
|
PseudoCAP
|
biological database
|
|
|
|
|
|
523
|
ARUK-UCL
|
biological database
|
|
|
|
|
|
524
|
Gene Ontology
|
biological database
|
gene
|
|
|
|
|
525
|
SynGO
|
biological database
|
|
|
|
|
|
526
|
YuBioLab
|
biological database
|
|
|
|
|
|
527
|
Living Plant Collections Database
|
biological database
|
|
|
|
proprietary license
|
copyrighted
|
528
|
Belgian Species List
|
biological database
|
|
|
Belgian Species List ID
|
Creative Commons CC0 License
|
public domain
|
529
|
Allie
|
biological database chemical database medical database
|
|
|
|
|
|
530
|
Colil
|
biological database chemical database medical database
|
|
|
|
|
|
531
|
Genomics England PanelApp
|
biological database
|
|
|
|
|
|
532
|
CellMarker
|
biological database
|
cluster of differentiation
|
|
|
|
|
533
|
FARME
|
biological database
|
antibiotic DNA protein
|
|
|
|
|
534
|
VFDB
|
biological database
|
virulence factor
|
|
|
|
|
535
|
ARDB - Antibiotic Resistance Genes Database
|
biological database
|
|
|
|
|
|
536
|
MvirDB
|
biological database
|
toxin virulence factor antibiotic-resistance gene bacteria
|
|
|
|
|
537
|
ProKinO: Protein Kinase Ontology Browser
|
biological database online database ontology
|
protein kinase
|
|
|
|
|
538
|
gene2phenotype
|
biological database online database
|
|
|
|
|
|
539
|
WormBase RNAi
|
biological database
|
|
|
|
|
|
540
|
PASS2
|
biological database
|
protein structure
|
|
|
|
|
541
|
ICEberg
|
biological database
|
Integrative and conjugative element
|
|
|
|
|
542
|
AAindex
|
biological database
|
amino acid
|
|
|
|
|
543
|
Phenoscape
|
biological database
|
phenotype
|
|
|
|
|
544
|
PanTHERIA
|
biological database
|
|
|
|
|
|
545
|
NCBI Genome
|
biological database
|
genome
|
|
sequenced genome URL
|
|
|
546
|
NCBI Assembly
|
biological database
|
|
|
sequenced genome URL
|
|
|
547
|
Slovene Vernacular Names of Invertebrates
|
biological database
|
|
|
|
|
|
548
|
GlyGen
|
biological database online database
|
|
|
|
Creative Commons Attribution 4.0 International
|
|
549
|
Native Plants Database
|
biological database online database
|
|
|
Native Plants Database ID
|
|
|
550
|
VertNet
|
biological database
|
|
|
|
|
|
551
|
RNACentral
|
biological database
|
RNA
|
|
RNACentral ID
|
Creative Commons CC0 License
|
copyrighted, dedicated to the public domain by copyright holder
|
552
|
PanglaoDB
|
biological database
|
|
|
|
|
|
553
|
LOTUS
|
biological database chemical database
|
|
The Bioregistry
|
|
|
|
554
|
Universal Virus Database
|
biological database
|
|
|
|
|
|
555
|
ECOD
|
biological database
|
protein domain
|
|
|
|
|
556
|
Unisave.
|
biological database
|
|
|
|
|
|
557
|
Malaysia Biodiversity Information System
|
biological database website
|
species
|
|
MyBIS species ID MyBIS protected area ID
|
|
|
558
|
ÉPOQ
|
biological database citizen science project
|
|
|
|
|
|
559
|
BioTIME
|
biological database
|
|
|
|
|
|
560
|
Scarabs: World Scarabaeidae Database
|
biological database
|
|
|
|
|
|
561
|
Japanese Red List
|
biological database
|
conservation status
|
|
|
|
|
562
|
Image Data Resource
|
biological database
|
microscopy
|
|
|
|
|
563
|
World Auchenorrhyncha Database
|
biological database
|
Myerslopiidae Palaeontinoidea Pereborioidea Prosboloidea Scytinopteroidea Cicadoidea Hylicelloidea Blattoprosboloidea Dysmorphoptiloidea Ligavenoidea Cicadellidae Melizoderidae Aetalionidae Auchenorrhyncha
|
|
World Auchenorrhyncha Database ID
|
Creative Commons CC0 License
|
copyrighted, dedicated to the public domain by copyright holder
|
564
|
Pladias
|
biological database online database
|
|
|
Pladias ID
|
|
|
565
|
Izeltlabuak.hu
|
biological database online database
|
|
|
izeltlabuak.hu ID
|
|
|
566
|
Endemia.nc
|
biological database online database voluntary association
|
fauna flora animal plant biota
|
|
Endemia.nc animal taxon ID
|
|
|
567
|
AnimalQTLdb
|
biological database
|
|
|
|
|
|
568
|
Australian Reptile Online Database
|
biological database online database
|
|
|
Australian Reptile Online Database ID
|
|
|
569
|
MGnify
|
biological database
|
|
|
|
|
|
570
|
The Drug Gene Interaction Database
|
biological database
|
gene disease
|
|
|
|
|
571
|
DDInter
|
biological database
|
|
|
|
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International
|
copyrighted
|
572
|
CoV3D
|
biological database
|
COVID-19
|
|
|
|
|
573
|
Drug repurposing for covid-19
|
biological database database
|
COVID-19
|
|
|
|
|
574
|
DockCoV2
|
biological database
|
COVID-19 drug
|
|
|
|
|
575
|
PAGER-CoV
|
biological database
|
Coronavirus
|
|
|
|
|
576
|
ViruSurf
|
biological database
|
virus disease genetics
|
|
|
|
|
577
|
Aging Atlas
|
biological database
|
human ageing
|
|
|
|
|
578
|
COVID19db
|
biological database
|
COVID-19
|
|
|
|
|
579
|
Ensembl COVID-19 resource
|
biological database
|
COVID-19 SARS-CoV-2
|
|
|
|
|
580
|
Esc (Immune escape variants in SARS-CoV-2)
|
biological database
|
COVID-19
|
|
|
|
|
581
|
SCoV2-MD
|
biological database
|
SARS-CoV-2 protein COVID-19
|
|
|
|
|
582
|
SCovid
|
biological database
|
COVID-19 tissue human
|
|
|
|
|
583
|
T-cell COVID-19 Atlas
|
biological database
|
COVID-19
|
|
|
|
|
584
|
VarEPS
|
biological database
|
SARS-CoV-2 COVID-19
|
|
|
|
|
585
|
Animal-eRNAdb
|
biological database
|
|
|
|
|
|
586
|
4D Nucleome Data Portal Biosource
|
biological database
|
|
|
|
|
|
587
|
4D Nucleome Data Portal Experiment Replicate
|
biological database
|
reproducibility
|
|
|
|
|
588
|
SIBiLS
|
biological database data library online database
|
|
|
|
|
|
589
|
sfaira portal
|
biological database
|
|
|
|
|
|
590
|
The Floral Reflectance Database FReD
|
biological database
|
flower reflectance
|
|
|
|
|
591
|
The ABCD (AntiBodies Chemically Defined) Database
|
biological database
|
|
|
|
|
|
592
|
Insect Color Database ICDB
|
biological database website
|
insect color beetles Lepidoptera Odonata entomologist Taxås
|
|
|
|
copyrighted
|
593
|
APID Agile Protein Interactomes DataServer
|
biological database
|
interactome
|
|
|
|
|
594
|
HIV-1 Human Interaction Database
|
biological database
|
HIV
|
|
|
|
|
595
|
CirGRDB
|
biological database
|
|
|
|
|
|
596
|
LIAS names
|
biological database
|
lichen
|
|
|
|
|
597
|
LIAS light
|
biological database
|
lichen
|
|
|
|
|
598
|
TassDB2
|
biological database
|
human mouse
|
|
|
|
|
599
|
GreenCircRNA
|
biological database
|
|
|
|
|
|
600
|
AntiJen
|
biological database
|
|
|
|
|
|
601
|
GabiPD: the GABI primary database
|
biological database
|
plant genome
|
|
|
|
|
602
|
PRGdb database
|
biological database
|
|
|
|
|
|
603
|
ABS: a database of Annotated regulatory Binding Sites from orthologous promoters
|
biological database
|
binding site protein family
|
|
|
GNU General Public License
|
copyrighted
|
604
|
AceView Database
|
biological database
|
worm gene
|
|
|
|
|
605
|
AddexBio
|
biological database
|
cell line
|
|
|
|
|
606
|
Allergome Database
|
biological database
|
allergen
|
|
|
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International
|
copyrighted
|
607
|
3D-Footprint
|
biological database
|
|
|
|
|
|
608
|
RegPrecise
|
biological database
|
|
|
|
|
|
609
|
TransmiR
|
biological database
|
|
|
|
|
|
610
|
iPTMnet
|
biological database
|
|
|
|
|
|
611
|
BioSample
|
biological database
|
biosample
|
|
|
|
|
612
|
lncRNASNP2 database
|
biological database
|
long non-coding RNA
|
|
|
|
|
613
|
The Antibody Registry
|
biological database
|
antibody
|
|
|
|
|
614
|
ChiTaRS
|
biological database
|
|
|
|
|
|
615
|
Applied Biological Materials cell line products
|
biological database
|
|
|
|
|
|
616
|
Assembling the Fungal Tree of Life
|
biological database
|
fungus
|
|
|
Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported
|
copyrighted
|
617
|
JenAge Ageing Factor Database - AgeFactDB
|
biological database
|
human ageing disease
|
|
|
|
|
618
|
almena
|
biological database
|
disease genome
|
|
|
|
|
619
|
BodyParts3D/Anatomography
|
biological database
|
disease
|
|
|
|
|
620
|
CSVS - The Collaborative Spanish Variability Server
|
biological database
|
disease
|
|
|
|
|
621
|
Genotypes and Phenotypes (dbGaP)
|
biological database
|
disease
|
|
|
|
|
622
|
Monoallelic Expression (MAE)
|
biological database
|
gene disease
|
|
|
|
|
623
|
DG-CST (Disease Gene Conserved Sequence Tags Database)
|
biological database
|
gene disease
|
|
|
|
|
624
|
DIDA: A curated and annotated digenic diseases database
|
biological database
|
gene disease
|
|
|
|
|
625
|
Exome Aggregation Consortium Database (gnomAD)
|
biological database
|
gene disease genome human
|
|
|
|
|
626
|
FlyTF: Drosophila transcription factor database
|
biological database
|
Drosophila transcription factor
|
|
|
|
|
627
|
DatabasE of StruCtuRe and functIon residue-Based prEdictions of PROTeins (DescribePROT)
|
biological database
|
|
|
|
|
|
628
|
GBshape: a genome browser database for DNA shape annotations
|
biological database
|
DNA gene genome
|
|
|
|
|
629
|
Isfinder
|
biological database
|
bacteria Archaea
|
|
|
|
|
630
|
OGRDB
|
biological database
|
gene
|
|
|
|
|
631
|
R-loopDB
|
biological database
|
genome
|
|
|
|
|
632
|
S/MARt DB
|
biological database
|
gene
|
|
|
|
|
633
|
SINEBase: a database and tools for SINE analysis
|
biological database
|
genome
|
|
|
|
|
634
|
MolluscDB
|
biological database
|
Mollusca genomics
|
|
|
|
|
635
|
UCNEbase
|
biological database
|
genomics evolution Vertebrata
|
|
|
|
|
636
|
NRichD Database
|
biological database
|
|
|
|
|
|
637
|
Uniclust
|
biological database
|
|
|
|
|
|
638
|
UniParc
|
biological database
|
|
|
|
|
|
639
|
UniRef 2022_01 results
|
biological database
|
|
|
|
|
|
640
|
JaponicusDB
|
biological database
|
genomics Schizosaccharomyces japonicus
|
|
|
|
|
641
|
TOPPR
|
biological database
|
|
|
|
|
|
642
|
SwissSidechain
|
biological database
|
|
|
|
|
|
643
|
REFOLDdb
|
biological database
|
|
|
|
|
|
644
|
ProThermDB
|
biological database
|
|
|
|
|
|
645
|
PPD Protein pKa Database
|
biological database
|
|
|
|
|
|
646
|
GPCRdb
|
biological database
|
|
|
|
|
|
647
|
HEXEvent - a database of Human EXon splicing Events
|
biological database
|
exon human gene
|
|
|
|
|
648
|
SpliceAid database
|
biological database
|
RNA human
|
|
|
|
|
649
|
Spliceosome Database
|
biological database
|
spliceosome
|
|
|
|
|
650
|
uORFdb
|
biological database
|
eukaryote
|
|
|
|
|
651
|
MemMoRF database of membrane associated disordered protein regions
|
biological database
|
|
|
|
|
|
652
|
EROP-Moscow
|
biological database
|
|
|
|
|
|
653
|
Cyanolyase
|
biological database
|
|
|
|
|
|
654
|
Cybase The database of cyclic proteins
|
biological database
|
|
|
|
|
|
655
|
ChromDB- The Chromatin Database
|
biological database
|
|
|
|
|
|
656
|
eSLDB - eukaryotic Subcellular Localization database
|
biological database
|
|
|
|
|
|
657
|
ASPD (Artificial Selected Proteins/Peptides Database)
|
biological database
|
protein peptide
|
|
|
|
|
658
|
ChIPBase
|
biological database
|
ChIP-sequencing transcription factor gene
|
|
|
|
|
659
|
CMGS database (CMGSDB)
|
biological database
|
gene Caenorhabditis elegans
|
|
|
|
|
660
|
COXPRESdb
|
biological database
|
gene
|
|
|
|
|
661
|
CTCFBSDB: A database for CTCF binding sites and genome organization
|
biological database
|
genome CTCF
|
|
|
|
|
662
|
dbSUPER
|
biological database
|
genome human Mus
|
|
|
|
|
663
|
IWDB Interaction Web DataBase
|
biological database
|
|
|
|
|
|
664
|
Protein Antigen Database
|
biological database
|
protein antigen Streptococcus pneumoniae
|
|
|
|
|
665
|
Human Intermediate Filament Data base
|
biological database
|
disease
|
|
|
|
|
666
|
DEPOD
|
biological database
|
|
|
|
|
|
667
|
NESbase
|
biological database
|
|
|
|
|
|
668
|
Greglist
|
biological database G-quadruplex
|
gene
|
|
|
|
|
669
|
GTRD
|
biological database
|
gene
|
|
|
|
|
670
|
HTPSELEX database
|
biological database
|
transcription factor
|
|
|
|
|
671
|
OnTheFly database
|
biological database
|
transcription factor Diptera Drosophila
|
|
|
|
|
672
|
ooTFD
|
biological database
|
transcription factor
|
|
|
|
|
673
|
ORegAnno
|
biological database
|
genome
|
|
|
|
|
674
|
PlantProm DB
|
biological database
|
plant RNA
|
|
|
|
|
675
|
SCPD The Promoter Database of Saccharomyces cerevisiae
|
biological database
|
Saccharomyces cerevisiae transcription factor gene
|
|
|
|
|
676
|
SELEX_DB
|
biological database
|
DNA oligomer
|
|
|
|
|
677
|
STIFDB Stress Responsive Transcription Factor Database
|
biological database
|
Arabidopsis thaliana Oryza sativa transcription factor
|
|
|
|
|
678
|
NMPdb - Nuclear matrix associated proteins database
|
biological database
|
|
|
|
|
|
679
|
Heme Protein Database
|
biological database
|
|
|
|
|
|
680
|
NPD - Nuclear Protein Database
|
biological database
|
|
|
|
|
|
681
|
SUBA SUBCELLULAR LOCALISATION DATABASE ARABIDOPSIS PROTEIN
|
biological database
|
|
|
|
|
|
682
|
THGS - Transmembrane Helices in Genome Sequences
|
biological database
|
|
|
|
|
|
683
|
TopDB-Topology Data Bank of Transmembrane Proteins Topology, Structure and Prediction
|
biological database
|
|
|
|
|
|
684
|
KNOTTIN database
|
biological database
|
molecular knots
|
|
|
|
|
685
|
TiProD: Tissue specific promoter Database
|
biological database
|
tissue gene
|
|
|
|
|
686
|
TRACTOR db
|
biological database
|
genome Gammaproteobacteria
|
|
|
|
|
687
|
TTSMI database
|
biological database
|
DNA genome
|
|
|
|
|
688
|
ASC Active Sequences Collection
|
biological database
|
|
|
|
|
|
689
|
MoonProt A Database for Moonlighting Proteins
|
biological database
|
|
|
|
|
|
690
|
The chaperonin database- cpnDB
|
biological database
|
|
|
|
|
|
691
|
eBLOCKS
|
biological database
|
|
|
|
|
|
692
|
eF-site - Electrostatic surface of Functional site
|
biological database
|
|
|
|
|
|
693
|
Eukaryotic Linear Motif Resource
|
biological database
|
|
|
|
|
|
694
|
FireDB
|
biological database
|
protein
|
|
|
Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International
|
copyrighted
|
695
|
HRaP - Database of occurrence of HomoRepeats and Patterns in proteomes
|
biological database
|
|
|
|
|
|
696
|
MeMotif
|
biological database
|
|
|
|
|
|
697
|
MetalPDB
|
biological database
|
|
|
|
|
|
698
|
mutLBSgeneDB mutated Ligand Binding Site gene DataBase
|
biological database
|
|
|
|
|
|
699
|
NBDB Nucleotide Binding Database
|
biological database
|
|
|
|
|
|
700
|
O-GLYCBASE-DTU Health Tech
|
biological database
|
|
|
|
|
|
701
|
iUUCD
|
biological database
|
|
|
|
|
|
702
|
ScanProsite-ProRule
|
biological database
|
|
|
|
|
|
703
|
PrOtein TerminUS- ProTeus
|
biological database
|
|
|
|
|
|
704
|
KLIFs
|
biological database
|
|
|
|
|
|
705
|
VDJdb
|
biological database
|
|
|
|
|
|
706
|
3DSwap: Database of Proteins involved in 3D domain Swapping
|
biological database
|
|
|
|
|
|
707
|
BAliBASE4
|
biological database
|
|
|
|
|
|
708
|
BACTIBASE a Database dedicated tobacteriocins
|
biological database
|
|
|
|
|
|
709
|
EVEREST - EVolutionary Ensembles of REcurrent SegmenTs
|
biological database
|
|
|
|
|
|
710
|
CyMoBase
|
biological database
|
|
|
|
|
|
711
|
SIB-My Hits
|
biological database
|
|
|
|
|
|
712
|
iPfam
|
biological database
|
|
|
|
|
|
713
|
iProLINK/ (PIR-Protein Information Resource)
|
biological database
|
|
|
|
|
|
714
|
VISTA Enhancer Browser
|
biological database
|
|
|
|
|
|
715
|
LenVarDB-Database of length variant protein domains
|
biological database
|
|
|
|
|
|
716
|
MulPSSM A searchable database of multiple PSSMs of structural and sequence families
|
biological database
|
|
|
|
|
|
717
|
OrtholugeDB-The Ortholog Database
|
biological database
|
|
|
|
|
|
718
|
PALI-Phylogeny and ALIgnment of homologous protein structures
|
biological database
|
|
|
|
|
|
719
|
PANTHER-Classification System
|
biological database
|
|
|
|
|
|
720
|
PhyloFacts
|
biological database
|
|
|
|
|
|
721
|
PIRSF- Protein Information Resource
|
biological database
|
|
|
|
|
|
722
|
Protein Clusters
|
biological database
|
|
|
|
|
|
723
|
RBP-Var--A platform for exploring functional variants involved in post-transcriptional regulation mediated by RNA-binding proteins
|
biological database
|
|
|
|
|
|
724
|
SBASE
|
biological database
|
|
|
|
|
|
725
|
SUPFAM-Evolutionary relationships between structure and sequence families
|
biological database
|
|
|
|
|
|
726
|
3DIV-KOBIC 국가생명연구자원정보센터
|
biological database
|
|
|
|
|
|
727
|
ADPriboDB 2.0 The Database of ADP-ribosylated proteins Learn about ADP-ribosylation and search for your protein of interest
|
biological database
|
|
|
|
|
|
728
|
ARAMEMNON
|
biological database
|
|
|
|
|
|
729
|
PoMaMo Database - Potato Maps and More
|
biological database
|
potato genome chromosome
|
|
|
|
|
730
|
BioFuelDB
|
biological database
|
enzyme biofuel
|
|
|
|
|
731
|
HoPaCI-db The Host-Pathogen and Coxiella Interaction database
|
biological database
|
pathogen Pseudomonas aeruginosa Coxiella burnetii
|
|
|
|
|
732
|
RNAiDB
|
biological database
|
Caenorhabditis elegans RNA interference
|
|
|
|
|
733
|
GtRNAdb
|
biological database
|
transfer RNA gene genome
|
|
|
|
|
734
|
RAP-DB
|
biological database
|
rice genome
|
|
|
|
|
735
|
Candida Genome Database
|
biological database
|
Candida genome
|
|
|
|
|
736
|
WholeCellKB
|
biological database
|
cell organism
|
|
|
|
|
737
|
Gephebase
|
biological database
|
gene eukaryote genotype phenotype
|
|
|
|
|
738
|
PseudoBase++
|
biological database
|
RNA
|
|
|
|
|
739
|
Organelle Genome Resources
|
biological database resource
|
genome organelle
|
|
|
|
|
740
|
Specify Collections Consortium
|
biological database online database web portal website
|
worldwide Amphibia Reptilia
|
|
|
|
copyrighted
|
741
|
Biota
|
biological database online database web portal website
|
Amphibia Reptilia taxonomy
|
|
|
|
copyrighted
|
742
|
Reptilian Transcriptomes
|
biological database online database website web portal sequence database
|
genome transcriptome Reptilia
|
|
|
|
no known copyright restrictions
|
743
|
Woody Plants Database
|
biological database online database
|
woody plant
|
|
Woody Plants Database ID Woody Plants Database cultivar ID
|
|
copyrighted
|
744
|
Snakes of Bangladesh
|
biological database online database website web portal image database
|
snake Bangladesh poison protein
|
|
|
|
copyrighted
|
745
|
Images of amphibians of Hong Kong
|
biological database online database website web portal image database
|
Amphibia Hong Kong
|
|
|
|
no known copyright restrictions
|
746
|
PortalWeb Ecuador
|
biological database image database web portal website online database
|
Amphibia Reptilia Ecuador genome
|
|
|
Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International
|
copyrighted, dedicated to the public domain by copyright holder
|
747
|
BioWeb Ecuador | Amphibians of Ecuador
|
biological database image database web portal website online database
|
Amphibia Ecuador evolution taxonomy conservation biology behavior
|
|
|
Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International
|
copyrighted, dedicated to the public domain by copyright holder
|
748
|
BioWeb Ecuador | Reptiles of Ecuador
|
biological database website online database web portal image database bibliographic database
|
Reptilia Ecuador evolution taxonomy conservation biology
|
|
|
Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International
|
copyrighted, dedicated to the public domain by copyright holder
|
749
|
RiceFREND
|
biological database
|
rice gene
|
|
|
|
|
750
|
ExplorEnz
|
biological database
|
enzyme
|
|
|
|
|
751
|
METscout
|
biological database
|
metabolism gene expression
|
|
|
|
|
752
|
NORINE
|
biological database
|
|
|
|
|
|
753
|
Olfactory Receptor DataBase (ORDB)
|
biological database
|
|
|
|
|
|
754
|
Peptaibol
|
biological database
|
|
|
|
|
|
755
|
PeroxiRedoxin classification Index
|
biological database
|
|
|
|
|
|
756
|
PyIgClassify-Clusters of Antibody CDR Loop Conformations
|
biological database
|
|
|
|
|
|
757
|
RPG - Ribosomal Protein Gene database
|
biological database
|
|
|
|
|
|
758
|
SDAP-Structural Database of Allergenic Proteins
|
biological database
|
|
|
|
|
|
759
|
Telomerase database
|
biological database
|
|
|
|
|
|
760
|
Ubiquitin and ubiquitin-like conjugation database-UUCD
|
biological database
|
|
|
|
|
|
761
|
BuchneraBase
|
biological database
|
Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomics
|
|
|
|
|
762
|
ProOpDB
|
biological database
|
genome
|
|
|
|
|
763
|
CircaDB
|
biological database
|
gene
|
|
|
|
|
764
|
MALISAM: Manual ALIgnments of Structurally Analogous Motifs
|
biological database
|
|
|
|
|
|
765
|
MegaMotifbase: Structural Motifs Database
|
biological database
|
|
|
|
|
|
766
|
GenomeRNAi
|
biological database
|
RNA
|
|
|
|
|
767
|
Network Portal
|
biological database
|
gene
|
|
|
|
|
768
|
BSORF
|
biological database
|
genome Bacillus subtilis
|
|
|
|
|
769
|
MiST
|
biological database
|
genome
|
|
|
|
|
770
|
Introduced species in the Canary Islands
|
biological database website online database web portal
|
Amphibia Canary Islands Spain introduced species Reptilia
|
|
|
|
copyrighted
|
771
|
DBETH
|
biological database
|
exotoxin human
|
|
|
|
|
772
|
RNA STRAND
|
biological database
|
RNA
|
|
|
|
|
773
|
ProteomeScout
|
biological database
|
protein post-translational protein modification
|
|
|
|
|
774
|
IMG/VR
|
biological database
|
genome virus
|
|
|
|
|
775
|
iBeetle-Base
|
biological database
|
RNA interference Tribolium
|
|
|
|
|
776
|
FlyAtlas
|
biological database
|
Drosophila melanogaster gene expression
|
|
|
|
|
777
|
GadFly
|
biological database
|
genome Drosophila
|
|
|
|
|
778
|
Drosophila polymorphism database
|
biological database
|
polymorphism Drosophila
|
|
|
|
|
779
|
SmedGD
|
biological database
|
Schmidtea mediterranea genome
|
|
|
|
|
780
|
InterActive Fly
|
biological database
|
Drosophila Metazoa development evolution
|
|
|
|
|
781
|
MonarchBase
|
biological database
|
Danaus plexippus
|
|
|
|
|
782
|
Carotenoids Database
|
biological database chemical database
|
carotenoid β-carotene
|
|
|
|
|
783
|
KinG: Kinases in Genomes
|
biological database
|
kinase genome
|
|
|
|
|
784
|
NEMBASE
|
biological database
|
Nematoda genomics
|
|
|
|
|
785
|
FlyATlas 2
|
biological database
|
Drosophila gene expression
|
|
|
|
|
786
|
AphidBase
|
biological database
|
aphid
|
|
|
|
|
787
|
Digital Development Database
|
biological database
|
cell differentiation phenotype Caenorhabditis elegans
|
|
|
|
|
788
|
WormQTL
|
biological database
|
Caenorhabditis
|
|
|
|
|
789
|
DroSpeGe
|
biological database
|
Drosophila Genomes
|
|
|
|
|
790
|
Helminth.net
|
biological database
|
helminths worm
|
|
|
|
|
791
|
ICTV Taxonomy database
|
biological database
|
virus classification
|
|
|
|
|
792
|
PlanMine
|
biological database
|
Planaria
|
|
|
|
|
793
|
LumbriBASE
|
biological database
|
Lumbricus rubellus expressed sequence tag Annelida
|
|
|
|
|
794
|
Pristionchus.org
|
biological database
|
Pristionchus pacificus evolutionary developmental biology
|
|
|
|
|
795
|
TriTrypDB
|
biological database
|
Trypanosomatida kinetoplastea pathogen
|
|
|
|
|
796
|
SilkSatDb
|
biological database
|
silkworm microsatellite
|
|
|
|
|
797
|
Project Plumage
|
biological database
|
bird color Natural History Museum, London photograph
|
|
|
|
|
798
|
Color Genes-International Federation of Pigment Cell Societies
|
biological database
|
gene pigment true rats Human disease genes Zebrafish pigmentation mutations and the processes of neural crest development.
|
|
|
|
|
799
|
The Feather Atlas flight feathers of Nort American Birds
|
biological database
|
bird feather wildlife color
|
|
|
|
|
800
|
Color Data
|
biological database
|
color human genetics phenotype Herencia breast cancer cardiovascular disease allele
|
|
|
|
|
801
|
FlyMine
|
biological database
|
Drosophila Anopheles Caenorhabditis elegans
|
|
|
|
|
802
|
cuticleDB
|
biological database
|
Arthropoda structural protein
|
|
|
|
|
803
|
wFleaBase
|
biological database
|
Daphnia
|
|
|
|
|
804
|
InsectBase
|
biological database
|
insect
|
|
|
|
|
805
|
WorfDB
|
biological database
|
ORFeome
|
|
|
|
|
806
|
CeNDR
|
biological database
|
Caenorhabditis elegans
|
|
|
|
|
807
|
i5k Workspace@NAL
|
biological database
|
Arthropoda Genome project
|
|
|
|
|
808
|
WDDD
|
biological database
|
Caenorhabditis elegans embryo
|
|
|
|
|
809
|
iGNM
|
biological database
|
protein
|
|
|
|
|
810
|
pE-DB
|
biological database
|
protein
|
|
|
|
|
811
|
WALTZ-DB
|
biological database
|
hexapeptide amyloid
|
|
|
|
|
812
|
DOMMINO
|
biological database
|
macromolecule
|
|
|
|
|
813
|
D²P²
|
biological database
|
protein
|
|
|
|
|
814
|
HOMSTRAD
|
biological database
|
protein family
|
|
|
|
|
815
|
PTGL
|
biological database
|
Protein topology
|
|
|
|
|
816
|
ccPDB
|
biological database
|
protein structure
|
|
|
|
|
817
|
SSToSS
|
biological database
|
protein domain
|
|
|
|
|
818
|
RsiteDB
|
biological database
|
binding site
|
|
|
|
|
819
|
STINGreport
|
biological database
|
amino acid
|
|
|
|
|
820
|
PSI-SGKB
|
biological database
|
synthetic biology
|
|
|
|
|
821
|
PiSITE
|
biological database
|
protein-protein interaction
|
|
|
|
|
822
|
Conformational Angles DataBase
|
biological database
|
protein structure
|
|
|
|
|
823
|
Structure Superposition Database
|
biological database
|
molecular structure
|
|
|
|
|
824
|
Nearest Neighbor Database
|
biological database
|
RNA folding
|
|
|
|
|
825
|
CAPS-DB
|
biological database
|
|
|
|
|
|
826
|
RepeatsDB
|
biological database
|
tandem repeat
|
|
|
|
|
827
|
SNAPPI
|
biological database
|
protein-protein interaction
|
|
|
|
|
828
|
RESP ESP charge DDataBase
|
biological database
|
force field
|
|
|
|
|
829
|
BIGNASim
|
biological database
|
nucleic acids simulation
|
|
|
|
|
830
|
Start2Fold
|
biological database
|
protein folding protein stability
|
|
|
|
|
831
|
GlyTouCan
|
biological database
|
glycan
|
|
|
|
|
832
|
EURING Data Bank
|
biological database
|
|
|
|
|
|
833
|
SASBDB
|
biological database
|
small-angle scattering
|
|
|
|
|
834
|
IDEAL
|
biological database
|
Intrinsically disordered proteins
|
|
|
|
|
835
|
Glycan Fragment DB
|
biological database
|
glycan
|
|
|
|
|
836
|
Protegen: Protective Antigens
|
biological database
|
antigen
|
|
|
|
|
837
|
Cancer Cell Metabolism Gene DB
|
biological database
|
cancer cell metabolism gene
|
|
|
|
|
838
|
IMGT/LIGM-DB
|
biological database organization
|
immunoglobulin nucleotide cell
|
|
|
|
|
839
|
Open Reading Frames DB
|
biological database
|
gene genomics clone protein
|
|
|
|
|
840
|
TGD - Tetrahymena Genome Database
|
biological database
|
Tetrahymena thermophila gene protein genome
|
|
|
|
|
841
|
Hemolytik
|
biological database
|
peptide
|
|
|
|
|
842
|
InterRNA
|
biological database
|
RNA
|
|
|
|
|
843
|
DSDBASE
|
biological database
|
disulfide bond
|
|
|
|
|
844
|
The Gen Curation Coalition
|
biological database
|
Gene Disease Database
|
|
|
|
|
845
|
Vir-Mir db: prediction of viral microRNA candidate hairpins
|
biological database
|
microRNA three prime untranslated region
|
|
|
|
|
846
|
IMGT/3Dstructure-DB
|
biological database
|
immunogenetics
|
|
|
|
|
847
|
HFV/ Ebola database
|
biological database
|
Ebola hemorrhagic fever genetics immunology nucleotide Genome browser
|
|
|
|
|
848
|
SCOPe
|
biological database
|
protein
|
|
|
|
|
849
|
NDB
|
biological database
|
nucleic acids
|
|
|
|
|
850
|
Jenalib
|
biological database
|
biopolymer macromolecule
|
|
|
|
|
851
|
PoSSuM
|
biological database
|
ligand binding
|
|
|
|
|
852
|
Glycan
|
biological database
|
glycan
|
|
|
|
|
853
|
Decoys-R-Us
|
biological database
|
protein structure
|
|
|
|
|
854
|
CPDB
|
biological database
|
cyclic permutation protein structure
|
|
|
|
|
855
|
ArchDB
|
biological database
|
protein structure
|
|
|
|
|
856
|
iProClass
|
biological database
|
protein
|
|
|
|
|
857
|
WERAM
|
biological database
|
DNA eukaryote
|
|
|
|
|
858
|
BarleyBase
|
biological database
|
plant
|
|
|
|
|
859
|
PlantPIs
|
biological database web page web resource
|
plant
|
|
|
|
|
860
|
TransportDB
|
biological database
|
genomics plasma membrane
|
|
|
|
|
861
|
PDBTM
|
biological database
|
transmembrane protein
|
|
|
|
|
862
|
CC+
|
biological database
|
Coiled coil
|
|
|
|
|
863
|
GTOP
|
biological database
|
protein
|
|
|
|
|
864
|
TSTMP
|
biological database
|
transmembrane protein
|
|
|
|
|
865
|
EMDataBank
|
biological database
|
electron microscopy
|
|
|
|
|
866
|
PSCDB
|
biological database
|
protein
|
|
|
|
|
867
|
LinkProt
|
biological database
|
protein structure
|
|
|
|
|
868
|
SIFTS
|
biological database
|
protein
|
|
|
|
|
869
|
Diatom EST DB
|
biological database
|
Diatomeas Phaeodactylum tricornutum eukaryote microorganism expressed sequence tag
|
|
|
|
|
870
|
VIPERdb
|
biological database
|
virus viral capsid protein structure
|
|
|
|
|
871
|
Yeast Intron Database
|
biological database
|
intron Saccharomyces cerevisiae genome eukaryote
|
|
|
|
|
872
|
MetalPDB
|
biological database
|
biological macromolecule metal enzyme macromolecule
|
|
|
|
|
873
|
ProtChemSI
|
biological database
|
protein
|
|
|
|
|
874
|
AS-ALPS
|
biological database
|
alternative mRNA splicing, via spliceosome
|
|
|
|
|
875
|
fPOP
|
biological database
|
protein
|
|
|
|
|
876
|
MeDReaders
|
biological database
|
DNA
|
|
|
|
|
877
|
AGRIS Arabidopsis Gene Regulatory Information Server
|
biological database server
|
Arabidopsis gene
|
|
|
|
|
878
|
Mouse Phenome Database
|
biological database
|
Mus phenome ontology database
|
|
|
|
|
879
|
Stanford Tissue Microarray Database
|
biological database
|
database DNA microarray molecular biology
|
|
|
|
|
880
|
OryGenesDB
|
biological database
|
rice molecule complementary DNA gene
|
|
|
|
|
881
|
HmtDB - Human Mitochondrial DataBase
|
biological database
|
human mitochondrion genomics database Biomedical
|
|
|
|
|
882
|
Mitochondrial Spatio-Temporal Expression Database
|
biological database
|
mitochondrial protein database messenger RNA Saccharomyces cerevisiae DNA microarray
|
|
|
|
|
883
|
MeT-DB
|
biological database
|
mammal transcriptome methylation microRNA database RNA
|
|
|
|
|
884
|
PDBflex
|
biological database
|
protein structure
|
|
|
|
|
885
|
ChemDB
|
biological database
|
small molecule
|
|
|
|
|
886
|
ApoHoloDB
|
biological database
|
protein
|
|
|
|
|
887
|
UniCarbKB
|
biological database
|
glycan
|
|
|
|
|
888
|
RNA Bricks
|
biological database
|
RNA
|
|
|
|
|
889
|
ToxoDB
|
biological database
|
Toxoplasma gondii genome database infectious disease parasite fungus
|
|
|
|
|
890
|
The Immune Epitope Database
|
biological database
|
T Cell Epitopes epitope B-cell immunology database
|
|
IEDB Epitope ID
|
|
|
891
|
plprot
|
biological database
|
protein plastid
|
|
|
|
|
892
|
List of plant species in China (2022 Edition)
|
biological database
|
|
|
|
Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International
|
copyrighted
|
893
|
ConSurf-DB
|
biological database
|
protein
|
|
|
|
|
894
|
SMoS.2
|
biological database
|
protein structure
|
|
|
|
|
895
|
mVOC
|
biological database
|
volatile organic compound
|
|
|
|
|
896
|
AtPID
|
biological database
|
protein Arabidopsis thaliana
|
|
|
|
|
897
|
Human Ageing Genomic Resources
|
biological database
|
gene disease
|
|
|
|
|
898
|
Genetics Home Reference
|
biological database
|
gene disease
|
|
|
|
|
899
|
MetaCrop
|
biological database
|
plant metabolism
|
|
|
|
|
900
|
PhosPhAt
|
biological database
|
Arabidopsis protein
|
|
|
|
|
901
|
FunCoup
|
biological database
|
genome
|
|
|
|
|
902
|
The Lafora Progressive Myoclonus Epilepsy Mutation and Polymorphism Database
|
biological database
|
epilepsy polymorphism disease
|
|
|
|
|
903
|
National Eye Institute Bank
|
biological database
|
eye disease
|
|
|
|
|
904
|
Genes to Cognition
|
biological database
|
gene disease
|
|
|
|
|
905
|
Type 2 Diabetes Knowledge Portal
|
biological database
|
diabetes disease
|
|
|
|
|
906
|
Schizophrenia Gene Resource 2
|
biological database
|
schizophrenia disease
|
|
|
|
|
907
|
Digital Ageing Atlas
|
biological database
|
human ageing disease
|
|
|
|
|
908
|
ImmunoBase
|
biological database
|
gene immunology disease
|
|
|
|
|
909
|
Objetivos selectivos en la base de datos de tumorigénesis humana MSI-H
|
biological database
|
disease
|
|
|
|
|
910
|
Resource of Asian Primary Immunodeficiency Diseases
|
biological database
|
immunodeficiency disease
|
|
|
|
|
911
|
Autophagy Database
|
biological database
|
autophagy disease
|
|
|
|
|
912
|
Carpe Database
|
biological database
|
epilepsy disease
|
|
|
|
|
913
|
Imprinted Genes and Related Effects
|
biological database
|
gene disease
|
|
|
|
|
914
|
A Resource for Eukaryotic DNA Replication
|
biological database
|
DNA disease
|
|
|
|
|
915
|
Ethanol-Related Gene Resource
|
biological database
|
genetics disease
|
|
|
|
|
916
|
CAMPSing
|
biological database
|
disease
|
|
|
|
|
917
|
Autism Informatics Portal
|
biological database
|
autism disease
|
|
|
|
|
918
|
Lowe Syndrome Mutation Database
|
biological database
|
oculocerebrorenal syndrome disease
|
|
|
|
|
919
|
ALZGENE - FIELD SYNOPSIS OF GENETIC ASSOCIATION STUDIES IN AD
|
biological database
|
Alzheimer's disease
|
|
|
|
|
920
|
Human Prostate Gene DataBase
|
biological database
|
prostate disease
|
|
|
|
|
921
|
The Autism Chromosome Rearrangement Database
|
biological database
|
autism disease
|
|
|
|
|
922
|
Diseases and Traits in LD
|
biological database
|
disease
|
|
|
|
|
923
|
Dragon Database for Methylated Genes and Diseases
|
biological database
|
gene disease
|
|
|
|
|
924
|
LncRNADisease database
|
biological database
|
disease
|
|
|
|
|
925
|
Pathguide
|
biological database
|
biological pathway
|
|
|
|
|
926
|
ChannelsDB
|
biological database
|
physicochemical process
|
|
|
|
|
927
|
HbVar
|
biological database website
|
disease
|
|
HbVar ID
|
|
|
928
|
NIH Genetic Testing Registry
|
biological database
|
disease gene
|
|
|
|
|
929
|
MalaCards: The human disease database
|
biological database
|
disease
|
|
|
|
|
930
|
PhenoModifier: a genetic modifier database for elucidating the genetic basis of human phenotypic variation.
|
biological database
|
disease gene
|
|
|
|
|
931
|
Human Induced Pluripontent Stem Cell Initiative
|
biological database
|
disease
|
|
|
|
|
932
|
MSY Breakpoint Mapper
|
biological database
|
disease
|
|
|
|
|
933
|
SNPeffect Phenotyping human mutations.
|
biological database
|
disease
|
|
|
|
|
934
|
The Centre for Arab Genomic Studies.
|
biological database
|
disease
|
|
|
|
|
935
|
Database of Genomic Variants
|
biological database
|
disease
|
|
|
|
|
936
|
Global Naturalized Alien Flora
|
biological database
|
|
|
|
|
|
937
|
HIV-1 resistance mutation database
|
biological database
|
HIV medication
|
|
|
|
|
938
|
Human Endogenous Retrovirus database
|
biological database
|
retrovirus human
|
|
|
|
|
939
|
The European rRNA database
|
biological database
|
ribosomal RNA
|
|
|
|
|
940
|
RPFdb
|
biological database
|
ribosome
|
|
|
|
|
941
|
T-Psi-C
|
biological database
|
transfer RNA
|
|
|
|
|
942
|
LncRNAWiki
|
biological database
|
long non-coding RNA
|
|
|
|
|
943
|
miRecords
|
biological database
|
microRNA
|
|
|
|
|
944
|
piRNAclusterDB
|
biological database
|
Piwi-interacting RNA
|
|
|
|
|
945
|
RNALocate
|
biological database
|
RNA
|
|
|
|
|
946
|
5S Ribosomal RNA Database
|
biological database
|
5S ribosomal RNA
|
|
|
|
|
947
|
3D rRNA modification maps
|
biological database
|
ribosomal RNA
|
|
|
|
|
948
|
miROrtho
|
biological database
|
microRNA
|
|
|
|
|
949
|
piRNABank
|
biological database
|
Piwi-interacting RNA
|
|
|
|
|
950
|
DIANA-LncBase
|
biological database
|
microRNA
|
|
|
|
|
951
|
Structural variation in chromosomes: inversions, translocations, insertions and deletions
|
biological database
|
disease gene
|
|
|
|
|
952
|
HaploReg
|
biological database
|
disease gene
|
|
|
|
|
953
|
VarySysDB
|
biological database
|
disease gene
|
|
|
|
|
954
|
tRFdb
|
biological database
|
transfer RNA
|
|
|
|
|
955
|
POSTAR3
|
biological database
|
RNA Post-transcriptional regulation
|
|
|
|
|
956
|
dbRES
|
biological database
|
RNA modification
|
|
|
|
|
957
|
LincSNP
|
biological database
|
polymorphism
|
|
|
|
|
958
|
snOPY
|
biological database
|
small nucleolar RNA
|
|
|
|
|
959
|
IRESite
|
biological database
|
internal ribosome entry site
|
|
|
|
|
960
|
ViRBase
|
biological database
|
non-coding RNA viral infectious disease
|
|
|
|
|
961
|
YM500
|
biological database
|
smRNA RNA sequencing cancer
|
|
|
|
|
962
|
Greengenes
|
biological database
|
taxonomy ribosomal RNA
|
|
|
|
|
963
|
REDIportal
|
biological database
|
RNA modification
|
|
|
|
|
964
|
tRNAdb
|
biological database
|
transfer RNA
|
|
|
|
|
965
|
DASHR
|
biological database
|
non-coding RNA
|
|
|
|
|
966
|
miRPathDB
|
biological database
|
microRNA
|
|
|
|
|
967
|
ARED
|
biological database
|
AU-rich element
|
|
|
|
|
968
|
miRDB
|
biological database
|
microRNA
|
|
|
|
|
969
|
PolyASite 2.0
|
biological database
|
polyadenylation
|
|
|
|
|
970
|
SomamiR
|
biological database
|
somatic mutation germline mutation cancer microRNA
|
|
|
|
|
971
|
doRiNA
|
biological database
|
RNA-binding proteins microRNA
|
|
|
|
|
972
|
IMOTdb
|
biological database
|
protein structure
|
|
|
|
|
973
|
GRSDB
|
biological database
|
G-quadruplex
|
|
|
|
|
974
|
Genome3D
|
biological database
|
protein structure
|
|
|
|
|
975
|
DSMM
|
biological database
|
biomolecule molecular dynamics simulation
|
|
|
|
|
976
|
Glycosciences.de
|
biological database
|
glycobiology glycomics
|
|
|
|
|
977
|
GlycoMapsDB
|
biological database
|
carbohydrate glycan
|
|
|
|
|
978
|
Glycosciences.DB
|
biological database
|
glycan
|
|
|
|
|
979
|
ShiBASE
|
biological database
|
Shigella comparative genomics
|
|
|
|
|
980
|
CryptoDB
|
biological database
|
Cryptosporidium
|
|
|
|
|
981
|
EcoliWiki
|
biological database
|
Escherichia coli
|
|
|
|
|
982
|
LNCediting
|
biological database
|
RNA
|
|
|
|
|
983
|
miR2Disease
|
biological database
|
RNA
|
|
|
|
|
984
|
TBDB
|
biological database
|
tuberculosis
|
|
|
|
|
985
|
DoGSD
|
biological database
|
genome dog Canidae
|
|
|
|
|
986
|
VBRC
|
biological database
|
Poxviridae African swine fever virus virus
|
|
|
|
|
987
|
AVONET
|
biological database
|
|
|
|
|
|
988
|
World Arachnid Catalog
|
biological database website
|
|
|
World Arachnid Catalog ID
|
|
|
989
|
MGAN
|
biological database
|
microbial genome
|
|
|
|
|
990
|
Essential genes in E. coli
|
biological database
|
essential gene Escherichia coli
|
|
|
|
|
991
|
Genomicus
|
biological database
|
genome
|
|
|
|
|
992
|
metaMicrobesOnline
|
biological database
|
bacterial genome metagenome
|
|
|
|
|
993
|
iSyTE
|
biological database
|
eye eye disease
|
|
|
|
|
994
|
ZInC
|
biological database
|
mutant Danio rerio insertion mutation
|
|
|
|
|
995
|
GenColors
|
biological database
|
genome prokaryotes
|
|
|
|
|
996
|
IUBMB Nomenclature database
|
biological database
|
chemical nomenclature
|
|
|
|
|
997
|
YeastNet
|
biological database
|
Saccharomyces cerevisiae gene network
|
|
|
|
|
998
|
Yeast Resource Center
|
biological database
|
yeast
|
|
|
|
|
999
|
MolliGen
|
biological database
|
genomics Mollicutes
|
|
|
|
|
1000
|
NHPRTR
|
biological database
|
transcriptome Quadrumana
|
|
|
|
|
1001
|
GenoList
|
biological database
|
microbial genome synteny
|
|
|
|
|
1002
|
IMG-ABC
|
biological database
|
Metabolic gene cluster
|
|
|
|
|
1003
|
IMG/M
|
biological database
|
microbial genome metagenome microbiome
|
|
|
|
|
1004
|
OGEE
|
biological database
|
essential gene cell line
|
|
|
|
|
1005
|
YGOB
|
biological database
|
synteny yeast genome
|
|
|
|
|
1006
|
IMPC
|
biological database
|
mouse genome protein-coding gene
|
|
|
|
|
1007
|
TISdb
|
biological database
|
open reading frame
|
|
|
|
|
1008
|
NetwoRx
|
biological database
|
chemogenomics yeast
|
|
|
|
|
1009
|
Colibri
|
biological database
|
Escherichia coli
|
|
|
|
|
1010
|
CistromeDB
|
biological database
|
Cistrome
|
|
|
|
|
1011
|
HEG-DB
|
biological database
|
overexpression genome
|
|
|
|
|
1012
|
plantRNA
|
biological database
|
RNA
|
|
|
|
|
1013
|
fRNAdb
|
biological database
|
RNA
|
|
|
|
|
1014
|
FunSimMat
|
biological database
|
protein
|
|
|
|
|
1015
|
Genome Project Database
|
biological database
|
Genome project
|
|
|
|
|
1016
|
DEG database
|
biological database
|
essential gene
|
|
|
|
|
1017
|
SecReT4
|
biological database
|
type IV secretion systems
|
|
|
|
|
1018
|
EK3D
|
biological database
|
Escherichia coli
|
|
|
|
|
1019
|
MycoCosm
|
biological database
|
fungus genome
|
|
|
|
|
1020
|
HGTree
|
biological database
|
horizontal gene transfer
|
|
|
|
|
1021
|
NCBI Viral genomes
|
biological database
|
virus
|
|
|
|
|
1022
|
HieranoiDB
|
biological database
|
proteome
|
|
|
|
|
1023
|
RIDOM
|
biological database
|
microbial genome
|
|
|
|
|
1024
|
PEDE
|
biological database
|
complementary DNA pig
|
|
|
|
|
1025
|
OikoBase
|
biological database
|
Oikopleura dioica
|
|
|
|
|
1026
|
WDCM
|
biological database
|
microorganism
|
|
|
|
|
1027
|
MicroScope
|
biological database
|
microbial genome
|
|
|
|
|
1028
|
PaVE
|
biological database
|
Papillomaviridae
|
|
|
|
|
1029
|
MouseNet v2
|
biological database
|
model organism
|
|
|
|
|
1030
|
SuperFly
|
biological database
|
gene expression regulation of gene expression Diptera
|
|
|
|
|
1031
|
CauloBrowser
|
biological database
|
Caulobacter crescentus
|
|
|
|
|
1032
|
SubtiWiki
|
biological database
|
Bacillus subtilis
|
|
|
|
|
1033
|
NuBBEDB
|
biological database
|
natural product
|
|
|
|
|
1034
|
Database of Interacting Protein Structures (DIPS)
|
biological database
|
|
|
|
Creative Commons Attribution 4.0 International
|
|
1035
|
ProteinNet
|
biological database
|
|
|
|
MIT License
|
|
1036
|
SidechainNet
|
biological database open-source software
|
|
|
|
3-clause BSD License
|
|
1037
|
EffectiveDB
|
biological database
|
bacterial genome protein
|
|
|
|
|
1038
|
ChlamDB
|
biological database
|
genomics Chlamydiae Planctomycetes Verrucomicrobiae
|
|
|
|
|
1039
|
euGenes
|
biological database
|
eukaryote
|
|
|
|
|
1040
|
BacWGSTdb
|
biological database
|
bacterial genome
|
|
|
|
|
1041
|
HBVdb
|
biological database
|
Hepatitis B virus
|
|
|
|
|
1042
|
H²DB
|
biological database
|
heritability locus
|
|
|
|
|
1043
|
PROPHECY
|
biological database
|
phenotype Saccharomyces cerevisiae
|
|
|
|
|
1044
|
GONUTS
|
biological database
|
Gene Ontology
|
|
|
|
|
1045
|
euHCVdb
|
biological database
|
Hepatitis C virus
|
|
|
|
|
1046
|
FungiDB
|
biological database
|
fungal genome Oomycetes
|
|
|
|
|
1047
|
diArk
|
biological database
|
genome transcriptome eukaryote
|
|
|
|
|
1048
|
BioThesaurus
|
biological database
|
thesaurus protein gene
|
|
|
|
|
1049
|
Mousebook
|
biological database
|
mouse model
|
|
|
|
|
1050
|
antiSMASH
|
biological database
|
genome
|
|
|
|
|
1051
|
pico-PLAZA
|
biological database
|
algae genome
|
|
|
|
|
1052
|
GenomeCRISPR
|
biological database
|
CRISPR-Cas method
|
|
|
|
|
1053
|
WormQTLHD
|
biological database
|
Caenorhabditis elegans quantitative trait locus
|
|
|
|
|
1054
|
MicrosporidiaDB
|
biological database
|
Microsporidia
|
|
|
|
|
1055
|
Manteia
|
biological database
|
gene expression
|
|
|
|
|
1056
|
DBTGR
|
biological database
|
regulation of gene expression
|
|
|
|
|
1057
|
The Living Color Database
|
biological database
|
color in nature biological pigment
|
|
|
|
|
1058
|
Lygaeoidea Species File
|
biological database online database
|
Lygaeoidea
|
|
Lygaeoidea Species File ID
|
|
|
1059
|
Dermaptera Species File
|
biological database online database
|
earwigs
|
|
|
|
|
1060
|
Embioptera Species File Online
|
biological database online database
|
|
|
|
|
|
1061
|
Plecoptera Species File
|
biological database online database
|
|
|
|
|
|
1062
|
Paraneoptera Species File Online
|
biological database online database
|
|
|
|
|
|
1063
|
Zoraptera Species File
|
biological database online database
|
|
|
|
|
|
1064
|
Mantophasmatodea Species File
|
biological database online database
|
|
|
|
|
|
1065
|
Aphid Species File
|
biological database online database
|
|
|
|
|
|
1066
|
Arthropoda Species File
|
biological database online database
|
|
|
|
|
|
1067
|
Polyneoptera Species File
|
biological database online database
|
|
|
|
|
|
1068
|
Coleorrhyncha Species File
|
biological database online database
|
|
|
|
|
|
1069
|
odonate phenotypic database
|
biological database
|
Odonata phenotype
|
|
|
|
|
1070
|
sPlot
|
biological database
|
|
|
|
|
|
1071
|
EU Soil Observatory
|
biological database
|
|
|
|
|
|
1072
|
Database of Invasive Island Species Eradications
|
biological database
|
|
|
|
|
|
1073
|
Grylloblattodea Species File
|
biological database online database
|
|
|
|
|
|
1074
|
Isoptera Species File
|
biological database online database
|
|
|
|
|
|
1075
|
Search System of Japanese Red Data
|
biological database
|
Japanese Red List fauna flora
|
|
Search System of Japanese Red Data ID
|
|
|
1076
|
Aves de Chile
|
biological database online database website
|
bird
|
|
Aves de Chile ID
|
|
|
1077
|
Biota of New Zealand
|
biological database online database
|
biota flora fauna biota of New Zealand
|
|
Biota of New Zealand ID
|
|
|
1078
|
Biodiversity Information System for Europe
|
biological database online database
|
|
|
|
|
|
1079
|
TORCH Data Portal
|
biological database online database
|
herbarium specimen botanical specimen
|
|
TORCH taxon ID
|
|
|
1080
|
Penstemon Database
|
biological database online database
|
Penstemon
|
|
Penstemon Database ID
|
|
|
1081
|
MitoCarta
|
biological database online database data set
|
|
|
|
|
|
1082
|
Featherbase
|
biological database
|
|
|
Featherbase ID
|
|
|
1083
|
GlyConnect
|
biological database online database
|
biology glycosylation
|
|
|
Creative Commons Attribution 4.0 International
|
copyrighted
|
1084
|
OMA
|
biological database online database
|
biology orthology protein
|
|
|
Creative Commons Attribution 4.0 International
|
copyrighted
|