Reconstructing evolution at the community level: A case study on Mediterranean amphibians (Q91857224)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30797941%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

title

Reconstructing evolution at the community level: A case study on Mediterranean amphibians (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30797941%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30797941%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

author name string

Sarah Ehl

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30797941%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

Michael Veith

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30797941%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

publication date

21 February 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30797941%20AND%20SRC:MED&resulttype=core&format=json

Molecular Phylogenetics and Evolution

25 April 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30797941%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

volume

134

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30797941%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

page(s)

211-225

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30797941%20AND%20SRC:MED&resulttype=core&format=json

Phylogeographic patterns of genetic diversity in eastern Mediterranean water frogs have been determined by geological processes and climate change in the Late Cenozoic

25 April 2020

cites work

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Fragmentation of the Alpine orogenic belt by microplate dispersal

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Vertebral number is highly evolvable in salamanders and newts (family Salamandridae) and variably associated with climatic parameters

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Intraspecific Phylogeography: The Mitochondrial DNA Bridge Between Population Genetics and Systematics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Arabia-Eurasia continental collision: Insights from late Tertiary foreland-basin evolution in the Alborz Mountains, northern Iran

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Comparative phylogeography of amphibians and reptiles in Algeria suggests common causes for the east-west phylogeographic breaks in the Maghreb

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Biogeography and contemporary climatic differentiation among Moroccan Salamandra algira

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

A geographic mosaic of evolutionary lineages within the insular endemic newt Euproctus montanus.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Palinspastic restoration and paleogeographic reconstruction of the peri-Tyrrhenian area during the Neogene

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

The Alboran volcanic-arc modulated the Messinian faunal exchange and salinity crisis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

BEAST 2: a software platform for Bayesian evolutionary analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

bModelTest: Bayesian phylogenetic site model averaging and model comparison

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

The modern molecular clock

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Rapid evolution of animal mitochondrial DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Migration of compression and extension in the Tyrrhenian Sea, insights from 40Ar/39Ar ages on micas along a transect from Corsica to Tuscany

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Is RAD-seq suitable for phylogenetic inference? An in silico assessment and optimization

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Taxonomy, biogeography and evolution of Euproctus (Amphibia: Salamandridae), with the resurrection of the genus Calotriton and the description of a new endemic species from the Iberian Peninsula

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Phylogeography of the lacertid lizard, Psammodromus algirus, in Iberia and across the Strait of Gibraltar

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Phylogeography, genetic structure and population divergence time of cheetahs in Africa and Asia: evidence for long-term geographic isolates

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Molecular systematics of the New World clingfish genus Gobiesox (Teleostei: Gobiesocidae) and the origin of a freshwater clade

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Late Miocene surface uplift of the southern margin of the Central Anatolian Plateau, Central Taurides, Turkey

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Geological evolution of the tethys belt from the atlantic to the pamirs since the LIAS

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Rocks and clocks: calibrating the Tree of Life using fossils and molecules

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Using Phylogenomic Data to Explore the Effects of Relaxed Clocks and Calibration Strategies on Divergence Time Estimation: Primates as a Test Case.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Using multiple relaxed-clock models to estimate evolutionary timescales from DNA sequence data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

ClockstaR: choosing the number of relaxed-clock models in molecular phylogenetic analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Dating the diversification of the major lineages of Passeriformes (Aves).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Cases in which Parsimony or Compatibility Methods will be Positively Misleading

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Phylogenomics reveals rapid, simultaneous diversification of three major clades of Gondwanan frogs at the Cretaceous-Paleogene boundary.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Testing alternative vicariance scenarios in Western Mediterranean discoglossid frogs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Phylogeny, phylogeography, and evolution in the Mediterranean region: News from a freshwater mussel (Potomida, Unionida).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Molecular phylogenetics and historical biogeography of the west-palearctic common toads (Bufo bufo species complex).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Evidence for an African-Iberian mammal dispersal during the pre-evaporitic Messinian

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

High levels of population subdivision in a morphologically conserved Mediterranean toad (Alytes cisternasii) result from recent, multiple refugia: evidence from mtDNA, microsatellites and nuclear genealogies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

On the post-25 Ma geodynamic evolution of the western Mediterranean

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

From species divergence to population structure: a multimarker approach on the most basal lineage of Salamandridae, the spectacled salamanders (genus Salamandrina) from Italy

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

The genetic legacy of the Quaternary ice ages

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Genetic consequences of climatic oscillations in the Quaternary

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Integration of Bayesian molecular clock methods and fossil-based soft bounds reveals early Cenozoic origin of African lacertid lizards

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Beyond fossil calibrations: realities of molecular clock practices in evolutionary biology

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Calibration choice, rate smoothing, and the pattern of tetrapod diversification according to the long nuclear gene RAG-1

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

A new time-scale for ray-finned fish evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Phylotranscriptomic consolidation of the jawed vertebrate timetree.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Phylogeography of a land snail suggests trans-Mediterranean neolithic transport

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Chronology, causes and progression of the Messinian salinity crisis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

The Fossil Calibration Database-A New Resource for Divergence Dating

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Advances in Time Estimation Methods for Molecular Data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Origin of the Betic-Rif mountain belt

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

ORIGINAL ARTICLE: Freshwater paths across the ocean: molecular phylogeny of the frog Ptychadena newtoni gives insights into amphibian colonization of oceanic islands

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Evolutionary rates, divergence dates, and the performance of mitochondrial genes in Bayesian phylogenetic analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

FOSSIL CALIBRATIONS AND MOLECULAR DIVERGENCE TIME ESTIMATES IN CENTRARCHID FISHES (TELEOSTEI: CENTRARCHIDAE)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Resolution of ray-finned fish phylogeny and timing of diversification

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Assessing concordance of fossil calibration points in molecular clock studies: an example using turtles.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Assessing the quality of molecular divergence time estimates by fossil calibrations and fossil-based model selection

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Apatite fission-track data for the Miocene Arabia-Eurasia collision

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

APE: Analyses of Phylogenetics and Evolution in R language

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Best practices for justifying fossil calibrations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Biogeography of Neurergus strauchii barani Öz, 1994 and N. s. strauchii (Steindachner, 1887) (Amphibia: Salamandridae) assessed using morphological and molecular data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Divergence time estimation using fossils as terminal taxa and the origins of Lissamphibia.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

A large-scale phylogeny of Amphibia including over 2800 species, and a revised classification of extant frogs, salamanders, and caecilians

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Evolutionary history of the genus Tarentola (Gekkota: Phyllodactylidae) from the Mediterranean Basin, estimated using multilocus sequence data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Global patterns of diversification in the history of modern amphibians

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

MrBayes 3: Bayesian phylogenetic inference under mixed models

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Reconstruction of the tectonic evolution of the western Mediterranean since the Oligocene

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Neogene and Quaternary rollback evolution of the Tyrrhenian Sea, the Apennines, and the Sicilian Maghrebides

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

A multilocus timescale for the origin of extant amphibians

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Molecular phylogeny and divergence dates for Australasian elapids and sea snakes (hydrophiinae): evidence from seven genes for rapid evolutionary radiations.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Ancient hyaenas highlight the old problem of estimating evolutionary rates.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Playing chicken (Gallus gallus): methodological inconsistencies of molecular divergence date estimates due to secondary calibration points.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

The development of three long universal nuclear protein-coding locus markers and their application to osteichthyan phylogenetics with nested PCR

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Incorporating Molecular Evolution into Phylogenetic Analysis, and a New Compilation of Conserved Polymerase Chain Reaction Primers for Animal Mitochondrial DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

A Bayesian approach on molecules and behavior: reconsidering phylogenetic and evolutionary patterns of the Salamandridae with emphasis on Triturus newts

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Molecular phylogeny of the salamandrid genus Neurergus: evidence for an intrageneric switch of reproductive biology

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Post-Messinian evolutionary relationships across the Sicilian channel: mitochondrial and nuclear markers link a new green toad from Sicily to African relatives

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Range-wide phylogeography of Juniperus thurifera L., a presumptive keystone species of western Mediterranean vegetation during cold stages of the Pleistocene.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

The Near East as a cradle of biodiversity: A phylogeography of banded newts (genus Ommatotriton) reveals extensive inter- and intraspecific genetic differentiation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Historical biogeography of Western Palaearctic pelobatid and pelodytid frogs: a molecular phylogenetic perspective

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Seven at one blow: the origin of major lineages of the viviparous Lycian salamanders (Lyciasalamandra Veith and Steinfartz, 2004) was triggered by a single paleo-historic event

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Cracking the nut: geographical adjacency of sister taxa supports vicariance in a polytomic salamander clade in the absence of node support

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Multiple overseas dispersal in amphibians

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Rapid diversification and dispersal during periods of global warming by plethodontid salamanders

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Exploring uncertainty in the calibration of the molecular clock

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Neogene tectonics in the Western Mediterranean may have caused the Messinian salinity crisis and an associated glacial event

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Calibrating the avian molecular clock

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Molecular phylogenetics and historical biogeography among salamandrids of the "true" salamander clade: rapid branching of numerous highly divergent lineages in Mertensiella luschani associated with the rise of Anatolia

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Deep diversification and long-term persistence in the South American 'dry diagonal': integrating continent-wide phylogeography and distribution modeling of geckos.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Cryptic crested newt diversity at the Eurasian transition: the mitochondrial DNA phylogeography of Near Eastern Triturus newts

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Comparison of Likelihood and Bayesian Methods for Estimating Divergence Times Using Multiple Gene Loci and Calibration Points, with Application to a Radiation of Cute-Looking Mouse Lemur Species

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Higher-level salamander relationships and divergence dates inferred from complete mitochondrial genomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Exploring patterns and extent of bias in estimating divergence time from mitochondrial DNA sequence data in a particular lineage: a case study of salamanders (order Caudata).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

The late Miocene Mediterranean-Atlantic connections through the North Rifian Corridor: New insights from the Boudinar and Arbaa Taourirt basins (northeastern Rif, Morocco)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

Development of vegetation and continental aridity in northwestern Africa during the Late Pliocene: the pollen record of ODP site 658

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2019.02.013

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1016/J.YMPEV.2019.02.013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30797941%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

1 reference