Carotenoid biosynthesis genes in rice: structural analysis, genome-wide expression profiling and phylogenetic analysis (Q84850170)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19890663%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

title

Carotenoid biosynthesis genes in rice: structural analysis, genome-wide expression profiling and phylogenetic analysis (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19890663%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

author name string

Neetu Chaudhary

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19890663%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

Aashima Nijhawan

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19890663%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

Jitendra P Khurana

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19890663%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

Paramjit Khurana

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19890663%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

publication date

5 November 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19890663%20AND%20SRC:MED&resulttype=core&format=json

Molecular Genetics and Genomics

11 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19890663%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

volume

283

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19890663%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

page(s)

13-33

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19890663%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19890663%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1007/s00438-009-0495-x

11 February 2020

exact match

0 references

cites work

Gene duplication in the carotenoid biosynthetic pathway preceded evolution of the grasses

1 reference

12 December 2020

Carotenoid cation formation and the regulation of photosynthetic light harvesting

1 reference

12 December 2020

Application of Affymetrix array and Massively Parallel Signature Sequencing for identification of genes involved in prostate cancer progression

1 reference

12 December 2020

Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis

1 reference

12 December 2020

Lineage-specific gene expansions in bacterial and archaeal genomes

1 reference

12 December 2020

Circadian regulation of the PhCCD1 carotenoid cleavage dioxygenase controls emission of beta-ionone, a fragrance volatile of petunia flowers

1 reference

12 December 2020

The Arabidopsis LUT1 locus encodes a member of the cytochrome p450 family that is required for carotenoid epsilon-ring hydroxylation activity

1 reference

12 December 2020

The tomato carotenoid cleavage dioxygenase 1 genes contribute to the formation of the flavor volatiles beta-ionone, pseudoionone, and geranylacetone

1 reference

12 December 2020

Altered xanthophyll compositions adversely affect chlorophyll accumulation and nonphotochemical quenching in Arabidopsis mutants.

1 reference

12 December 2020

A comparison of microarray and MPSS technology platforms for expression analysis of Arabidopsis

1 reference

12 December 2020

Evidence for a role of salicylic acid in the oxidative damage generated by NaCl and osmotic stress in Arabidopsis seedlings

1 reference

12 December 2020

Expression of xanthophyll biosynthetic genes during light-dependent chloroplast differentiation

1 reference

12 December 2020

Plant MPSS databases: signature-based transcriptional resources for analyses of mRNA and small RNA

1 reference

12 December 2020

Biosynthesis of the food and cosmetic plant pigment bixin (annatto).

1 reference

12 December 2020

Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence

1 reference

12 December 2020

Natural genetic variation in lycopene epsilon cyclase tapped for maize biofortification

1 reference

12 December 2020

Ectopic expression of a tomato 9-cis-epoxycarotenoid dioxygenase gene causes over-production of abscisic acid

1 reference

12 December 2020

Tomato strigolactones are derived from carotenoids and their biosynthesis is promoted by phosphate starvation.

1 reference

12 December 2020

Patterns of gene duplication and functional diversification during the evolution of the AP1/SQUA subfamily of plant MADS-box genes.

1 reference

12 December 2020

Rapid Regulation of Light Harvesting and Plant Fitness in the Field

1 reference

12 December 2020

The maize phytoene synthase gene family: overlapping roles for carotenogenesis in endosperm, photomorphogenesis, and thermal stress tolerance.

1 reference

12 December 2020

Abscisic acid biosynthesis in tomato: regulation of zeaxanthin epoxidase and 9-cis-epoxycarotenoid dioxygenase mRNAs by light/dark cycles, water stress and abscisic acid.

1 reference

12 December 2020

Improving the nutritional value of Golden Rice through increased pro-vitamin A content

1 reference

12 December 2020

Oxidative remodeling of chromoplast carotenoids: identification of the carotenoid dioxygenase CsCCD and CsZCD genes involved in Crocus secondary metabolite biogenesis

1 reference

12 December 2020

Antioxidants, free radicals, storage proteins, puroindolines, and proteolytic activities in bread wheat (Triticum aestivum) seeds during accelerated aging

1 reference

12 December 2020

Engineering the provitamin A (beta-carotene) biosynthetic pathway into (carotenoid-free) rice endosperm

1 reference

12 December 2020

Different roles of alpha- and beta-branch xanthophylls in photosystem assembly and photoprotection

1 reference

12 December 2020

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

1 reference

12 December 2020

The Sorghum bicolor genome and the diversification of grasses

1 reference

12 December 2020

Target site specificity of the Tos17 retrotransposon shows a preference for insertion within genes and against insertion in retrotransposon-rich regions of the genome.

1 reference

12 December 2020

Effect of the cauliflower Or transgene on carotenoid accumulation and chromoplast formation in transgenic potato tubers

1 reference

12 December 2020

Dissecting the biosynthetic pathway for the bypass1 root-derived signal.

1 reference

12 December 2020

Xanthophyll biosynthetic mutants of Arabidopsis thaliana: altered nonphotochemical quenching of chlorophyll fluorescence is due to changes in Photosystem II antenna size and stability.

1 reference

12 December 2020

A novel gene mutation that confers abnormal patterns of beta-carotene accumulation in cauliflower (Brassica oleracea var. botrytis).

1 reference

12 December 2020

The map-based sequence of the rice genome

1 reference

12 December 2020

A third phytoene synthase is devoted to abiotic stress-induced abscisic acid formation in rice and defines functional diversification of phytoene synthase genes

1 reference

12 December 2020

Differential effects of carotenoids on lipid peroxidation due to membrane interactions: X-ray diffraction analysis

1 reference

12 December 2020

1 reference

12 December 2020

The violaxanthin cycle protects plants from photooxidative damage by more than one mechanism

1 reference

12 December 2020

Vitamin synthesis in plants: tocopherols and carotenoids

1 reference

12 December 2020

Global changes in gene expression in response to high light in Arabidopsis

1 reference

12 December 2020

PSY3, a new member of the phytoene synthase gene family conserved in the Poaceae and regulator of abiotic stress-induced root carotenogenesis

1 reference

12 December 2020

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

1 reference

12 December 2020

Escherichia coli as a platform for functional expression of plant P450 carotene hydroxylases.

1 reference

12 December 2020

Carotenoid transformations in the chloroplast envelope

1 reference

12 December 2020

Regulation and activation of phytoene synthase, a key enzyme in carotenoid biosynthesis, during photomorphogenesis.

1 reference

12 December 2020

Carotenoid accumulation and function in seeds and non-green tissues.

1 reference

12 December 2020

Light-induced Changes of the Carotenoid Levels in Chloroplast Envelopes.

1 reference

12 December 2020

Viviparous-5 encodes phytoene desaturase, an enzyme essential for abscisic acid (ABA) accumulation and seed development in maize

1 reference

12 December 2020

The generation of new protein functions by the combination of domains

1 reference

12 December 2020

Light-dependent regulation of carotenoid biosynthesis occurs at the level of phytoene synthase expression and is mediated by phytochrome in Sinapis alba and Arabidopsis thaliana seedlings

1 reference

12 December 2020

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

1 reference

12 December 2020

Cloning and functional analysis of the beta-carotene hydroxylase of Arabidopsis thaliana

1 reference

12 December 2020

Transgenic rice (Oryza sativa) endosperm expressing daffodil (Narcissus pseudonarcissus) phytoene synthase accumulates phytoene, a key intermediate of provitamin A biosynthesis

1 reference

12 December 2020

Identification of the carotenoid isomerase provides insight into carotenoid biosynthesis, prolamellar body formation, and photomorphogenesis

1 reference

12 December 2020

Abscisic acid biosynthesis and catabolism

1 reference

12 December 2020

Molecular mechanisms underlying carotenogenesis in the chromoplast: multilevel regulation of carotenoid-associated genes

1 reference

12 December 2020

An expression atlas of rice mRNAs and small RNAs

1 reference

12 December 2020

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

1 reference

12 December 2020

Genome-wide characterization of the lignification toolbox in Arabidopsis

1 reference

12 December 2020

Lutein is needed for efficient chlorophyll triplet quenching in the major LHCII antenna complex of higher plants and effective photoprotection in vivo under strong light

1 reference

12 December 2020

Characterization of a second carotenoid beta-hydroxylase gene from Arabidopsis and its relationship to the LUT1 locus

1 reference

12 December 2020

Accumulation of carotenoids and expression of carotenoid biosynthetic genes during maturation in citrus fruit.

1 reference

12 December 2020

Phytoene synthase-2 enzyme activity in tomato does not contribute to carotenoid synthesis in ripening fruit.

1 reference

12 December 2020

Regulation and manipulation of ABA biosynthesis in roots.

1 reference

12 December 2020

The role of lineage-specific gene family expansion in the evolution of eukaryotes

1 reference

12 December 2020

Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

1 reference

12 December 2020

Photoinhibition, carotenoid composition and the co-regulation of photochemical and non-photochemical quenching in neotropical savanna trees

1 reference

12 December 2020

Abscisic Acid and abiotic stress signaling

1 reference

12 December 2020

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

12 December 2020

Genome annotation: which tools do we have for it?

1 reference

12 December 2020

Carotenoid metabolism: biosynthesis, regulation, and beyond

1 reference

12 December 2020

Abscisic acid and the pre-harvest sprouting in cereals

1 reference

12 December 2020

Overexpression of beta-carotene hydroxylase enhances stress tolerance in Arabidopsis.

1 reference

12 December 2020

10.1007/S00438-009-0495-X

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19890663%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

1 reference