Analysis of the genome sequence of the flowering plant Arabidopsis thaliana (Q22122387)

Hitomi Sakano

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Steven Salzberg

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W. Richard McCombie

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Huaming Chen

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Gregory P. Copenhaver

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Genome sequence of the nematode C. elegans: a platform for investigating biology

author name string

The Arabidopsis Genome Initiative

series ordinal

1

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publication date

14 December 2000

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language of work or name

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408

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issue

6814

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page(s)

796-815

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cites work

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7 January 2021

The genome sequence of Drosophila melanogaster

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7 January 2021

Arabidopsis thaliana: a model plant for genome analysis.

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7 January 2021

Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana

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7 January 2021

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana

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7 January 2021

Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.

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7 January 2021

Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana

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7 January 2021

Construction and characterization of the IGF Arabidopsis BAC library

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7 January 2021

Complementation of plant mutants with large genomic DNA fragments by a transformation-competent artificial chromosome vector accelerates positional cloning

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7 January 2021

zA map for sequence analysis of the Arabidopsis thaliana genome

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7 January 2021

A complete BAC-based physical map of the Arabidopsis thaliana genome

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7 January 2021

Structural Analysis of Arabidopsis thaliana Chromosome 5. I. Sequence Features of the 1.6 Mb Regions Covered by Twenty Physically Assigned P1 Clones

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7 January 2021

BAC representation of two low-copy regions of the genome of Arabidopsis thaliana

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7 January 2021

Genetic definition and sequence analysis of Arabidopsis centromeres

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7 January 2021

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

1 reference

7 January 2021

Evaluation of gene prediction software using a genomic data set: application to Arabidopsis thaliana sequences

1 reference

7 January 2021

The complete genome sequence of Escherichia coli K-12

1 reference

7 January 2021

LESSONS FROM SEQUENCING OF THE GENOME OF A UNICELLULAR CYANOBACTERIUM, SYNECHOCYSTIS SP. PCC6803.

1 reference

7 January 2021

RPS2 of Arabidopsis thaliana: a leucine-rich repeat class of plant disease resistance genes

1 reference

7 January 2021

F-Box Proteins Are Receptors that Recruit Phosphorylated Substrates to the SCF Ubiquitin-Ligase Complex

1 reference

7 January 2021

RING finger proteins: mediators of ubiquitin ligase activity

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7 January 2021

Comparative genomics of the eukaryotes

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7 January 2021

Alignment of whole genomes

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7 January 2021

Extensive duplication and reshuffling in the Arabidopsis genome

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7 January 2021

Genome evolution in polyploids

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7 January 2021

DNA sequence evidence for the segmental allotetraploid origin of maize

1 reference

7 January 2021

Comparing sequenced segments of the tomato and Arabidopsis genomes: large-scale duplication followed by selective gene loss creates a network of synteny

1 reference

7 January 2021

Pronounced intraspecific haplotype divergence at the RPP5 complex disease resistance locus of Arabidopsis

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7 January 2021

Cereal Genome Evolution: Grasses, line up and form a circle

1 reference

7 January 2021

Comparative genome analysis reveals extensive conservation of genome organisation for Arabidopsis thaliana and Capsella rubella.

1 reference

7 January 2021

Collinearity between a 30-centimorgan segment ofArabidopsis thalianachromosome 4 and duplicated regions within theBrassica napusgenome

1 reference

7 January 2021

Comparative physical mapping of segments of the genome of Brassica oleracea var. alboglabra that are homoeologous to sequenced regions of chromosomes 4 and 5 of Arabidopsis thaliana

1 reference

7 January 2021

Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data

1 reference

7 January 2021

Identification and analysis of homoeologous segments of the genomes of rice and Arabidopsis thaliana

1 reference

7 January 2021

Complete Structure of the Chloroplast Genome of Arabidopsis thaliana

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7 January 2021

The mitochondrial genome of Arabidopsis thaliana contains 57 genes in 366,924 nucleotides

1 reference

7 January 2021

Dynamic evolution of plant mitochondrial genomes: mobile genes and introns and highly variable mutation rates

1 reference

7 January 2021

Transposon diversity in Arabidopsis thaliana

1 reference

7 January 2021

Evidence that a family of miniature inverted-repeat transposable elements (MITEs) from the Arabidopsis thaliana genome has arisen from a pogo-like DNA transposon

1 reference

7 January 2021

Transposons, DNA methylation and gene control

1 reference

7 January 2021

Nested retrotransposons in the intergenic regions of the maize genome

1 reference

7 January 2021

Two-dimensional RFLP analyses reveal megabase-sized clusters of rRNA gene variants in Arabidopsis thaliana, suggesting local spreading of variants as the mode for gene homogenization during concerted evolution

1 reference

7 January 2021

Cytogenetics for the model system Arabidopsis thaliana

1 reference

7 January 2021

Isolation of a higher eukaryotic telomere from Arabidopsis thaliana

1 reference

7 January 2021

Arabidopsis thaliana Centromere Regions: Genetic Map Positions and Repetitive DNA Structure

1 reference

7 January 2021

Integrated cytogenetic map of chromosome arm 4S of A. thaliana: structural organization of heterochromatic knob and centromere region

1 reference

7 January 2021

Microbial genome analyses: comparative transport capabilities in eighteen prokaryotes 1 1Edited by G. von Heijne

1 reference

7 January 2021

Unified inventory of established and putative transporters encoded within the complete genome of Saccharomyces cerevisiae

1 reference

7 January 2021

A Role for the AKT1 Potassium Channel in Plant Nutrition

1 reference

7 January 2021

Depolarization of the Plasma Membrane of Neurospora During Active Transport of Glucose: Evidence for a Proton-Dependent Cotransport System

1 reference

7 January 2021

Systemin: a polypeptide signal for plant defensive genes

1 reference

7 January 2021

A phylogenomic study of DNA repair genes, proteins, and processes

1 reference

7 January 2021

Structure and function of transcription-repair coupling factor. I. Structural domains and binding properties

1 reference

7 January 2021

Molecular genetics of DNA repair in higher plants

1 reference

7 January 2021

Conserved plant genes with similarity to mammalian de novo DNA methyltransferases.

1 reference

7 January 2021

Drosophila proteins related to vertebrate DNA (5-cytosine) methyltransferases

1 reference

7 January 2021

An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus

1 reference

7 January 2021

A genomic perspective on plant transcription factors.

1 reference

7 January 2021

SHATTERPROOF MADS-box genes control seed dispersal in Arabidopsis

1 reference

7 January 2021

B and C floral organ identity functions require SEPALLATA MADS-box genes

1 reference

7 January 2021

Higher plant cells: gamma-tubulin and microtubule nucleation in the absence of centrosomes

1 reference

7 January 2021

Unique features of the plant vacuolar sorting machinery

1 reference

7 January 2021

The Rrop GTPase switch turns on polar growth in pollen

1 reference

7 January 2021

Triggering the cell cycle in plants

1 reference

7 January 2021

Cytokinesis in flowering plants: cellular process and developmental integration

1 reference

7 January 2021

Evolutionary relationships of Metazoa within the eukaryotes based on molecular data from Porifera

1 reference

7 January 2021

Receptor kinase activation and signal transduction in plants: an emerging picture

1 reference

7 January 2021

Eukaryotic phytochromes: light-regulated serine/threonine protein kinases with histidine kinase ancestry

1 reference

7 January 2021

Conservation and innovation in plant signaling pathways

1 reference

7 January 2021

Isolation of cDNAs encoding guanine nucleotide-binding protein beta-subunit homologues from maize (ZGB1) and Arabidopsis (AGB1).

1 reference

7 January 2021

Cyclic GMP and calcium mediate phytochrome phototransduction

1 reference

7 January 2021

Ethylene signaling: from mutants to molecules.

1 reference

7 January 2021

Two-component systems in plant signal transduction

1 reference

7 January 2021

Genes encoding pseudo-response regulators: insight into His-to-Asp phosphorelay and circadian rhythm in Arabidopsis thaliana

1 reference

7 January 2021

Phosphorelay signal transduction: the emerging family of plant response regulators

1 reference

7 January 2021

Cloning of the Arabidopsis clock gene TOC1, an autoregulatory response regulator homolog

1 reference

7 January 2021

Plant-pathogen arms races at the molecular level

1 reference

7 January 2021

Signal transduction in the plant immune response.

1 reference

7 January 2021

Plant disease-resistance proteins and the gene-for-gene concept

1 reference

7 January 2021

A conserved signaling pathway: the Drosophila toll-dorsal pathway

1 reference

7 January 2021

Light control of plant development

1 reference

7 January 2021

Blue-light photoreceptors in higher plants.

1 reference

7 January 2021

LOV (light, oxygen, or voltage) domains of the blue-light photoreceptor phototropin (nph1): binding sites for the chromophore flavin mononucleotide.

1 reference

7 January 2021

Complete Sequence of the Maize Chloroplast Genome: Gene Content, Hotspots of Divergence and Fine Tuning of Genetic Information by Transcript Editing

1 reference

7 January 2021

Toward a functional catalog of the plant genome. A survey of genes for lipid biosynthesis

1 reference

7 January 2021

Photorespiration-deficient Mutants of Arabidopsis thaliana Lacking Mitochondrial Serine Transhydroxymethylase Activity

1 reference

7 January 2021

The cellulose synthase superfamily

1 reference

7 January 2021

A Recipe for Cellulose

1 reference

7 January 2021

National Science Foundation-Sponsored Workshop Report: "The 2010 Project" functional genomics and the virtual plant. A blueprint for understanding how plants are built and how to improve them

1 reference

7 January 2021

Prediction of complete gene structures in human genomic DNA

1 reference

7 January 2021

GeneMark.hmm: new solutions for gene finding

1 reference

7 January 2021

Locating protein-coding regions in human DNA sequences by a multiple sensor-neural network approach

1 reference

7 January 2021

Interpolated Markov models for eukaryotic gene finding.

1 reference

7 January 2021

Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information

1 reference

7 January 2021

Prediction of locally optimal splice sites in plant pre-mRNA with applications to gene identification in Arabidopsis thaliana genomic DNA

1 reference

7 January 2021

The TIGR gene indices: reconstruction and representation of expressed gene sequences

1 reference

7 January 2021

A Tool for Analyzing and Annotating Genomic Sequences

1 reference

7 January 2021

Basic local alignment search tool

1 reference

7 January 2021

DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment

1 reference

7 January 2021

Predicting subcellular localization of proteins based on their N-terminal amino acid sequence

1 reference

7 January 2021

Overview of the yeast genome.

1 reference

COCI

https://opencitations.net/index/coci/api/v1/references/10.1038/35048692

High density molecular linkage maps of the tomato and potato genomes

15 July 2023

1 reference

COCI

https://opencitations.net/index/coci/api/v1/references/10.1038/35048692

Functional and structural genomics using PEDANT.

15 July 2023

1 reference

COCI

https://opencitations.net/index/coci/api/v1/references/10.1038/35048692

15 July 2023

Identifiers

DOI

10.1038/35048692

1 reference

Consolidated OpenCitations Corpus – April 2017

Dimensions Publication ID

1044298669

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Fatcat ID

release_ododks5wwrabjdjgdg4crvkc3e

0 references

1 reference

Consolidated OpenCitations Corpus – April 2017

PubMed publication ID

11130711

1 reference

Consolidated OpenCitations Corpus – April 2017