What are we missing about marine invasions? Filling in the gaps with evolutionary genomics (Q56380370)

2

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M. F. Richardson

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C. K. Tepolt

4

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L. A. Rollins

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S. R. Palumbi

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A. D. Miller

maintained by WikiProject

7

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language of work or name

1 reference

7 September 2016

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published in

Marine Biology

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volume

163

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issue

10

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WikiProject Invasion Biology

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exact match

https://scigraph.springernature.com/pub.10.1007/s00227-016-2961-4

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cites work

Introduction: Population Biology, Evolution, and Control of Invasive Species

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genomics and the future of conservation genetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Harnessing the power of RADseq for ecological and evolutionary genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Environmentally induced phenotypes and DNA methylation: how to deal with unpredictable conditions until the next generation and after.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Microsatellite markers developed through pyrosequencing allow clonal discrimination in the invasive alga Caulerpa taxifolia

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Marine invasive alien species: a threat to global biodiversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Worldwide phylogeography of the invasive ctenophore Mnemiopsis leidyi (Ctenophora) based on nuclear and mitochondrial DNA data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

RAD genotyping reveals fine-scale genetic structuring and provides powerful population assignment in a widely distributed marine species, the American lobster (Homarus americanus).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Adaptation to Low Salinity Promotes Genomic Divergence in Atlantic Cod (Gadus morhua L.)

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Spatial sorting drives morphological variation in the invasive bird, Acridotheris tristis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Transcriptome-based exon capture enables highly cost-effective comparative genomic data collection at moderate evolutionary scales

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

DNA methylation patterns and epigenetic memory

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

A hitchhiker’s guide to the Maritimes: anthropogenic transport facilitates long-distance dispersal of an invasive marine crab to Newfoundland

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

New view of population genetics of zooplankton: RAD-seq analysis reveals population structure of the North Atlantic planktonic copepod Centropages typicus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

What we still don't know about invasion genetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Population genomics reveals seahorses (Hippocampus erectus) of the western mid-Atlantic coast to be residents rather than vagrants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Population genetics of the invasive ctenophore Mnemiopsis leidyi in Europe reveal source–sink dynamics and secondary dispersal to the Mediterranean Sea

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Detecting selection in population trees: the Lewontin and Krakauer test extended

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Molecular approaches to the study of invasive seaweeds

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genomic reticulation indicates mixed ancestry in Southern-HemisphereMytilusspp. mussels

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

SNP-array reveals genome-wide patterns of geographical and potential adaptive divergence across the natural range of Atlantic salmon (Salmo salar).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Population genomics based on low coverage sequencing: how low should we go?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genetic structure of Carcinus maenas in southeast Australia

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Episodic global dispersal in shallow water marine organisms: the case history of the European shore crabsCarcinus maenasandC. aestuarii

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Facing change: forms and foundations of contemporary adaptation to biotic invasions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Expected Shannon Entropy and Shannon Differentiation between Subpopulations for Neutral Genes under the Finite Island Model

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Contemporary evolution during invasion: evidence for differentiation, natural selection, and local adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Does DNA methylation regulate metamorphosis? The case of the sea lamprey (Petromyzon marinus) as an example

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Transgenerational epigenetic imprints on mate preference

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Combining target enrichment with barcode multiplexing for high throughput SNP discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

DNA Methylation in Basal Metazoans: Insights from Ctenophores.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genetic patterns across multiple introductions of the globally invasive crab genus Carcinus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Are genes faster than crabs? Mitochondrial introgression exceeds larval dispersal during population expansion of the invasive crab Carcinus maenas

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Understanding Acceptable Level of Risk: Incorporating the Economic Cost of Under-Managing Invasive Species

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Common garden experiments in the genomic era: new perspectives and opportunities

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Transcriptome-wide polymorphisms of red abalone (Haliotis rufescens) reveal patterns of gene flow and local adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

The simple fool's guide to population genomics via RNA-Seq: an introduction to high-throughput sequencing data analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

SNP genotyping and population genomics from expressed sequences - current advances and future possibilities

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Phylogeography and adaptation genetics of stickleback from the Haida Gwaii archipelago revealed using genome-wide single nucleotide polymorphism genotyping

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

The role of DNA methylation on Octopus vulgaris development and their perspectives

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Founding events in species invasions: genetic variation, adaptive evolution, and the role of multiple introductions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

The devil is in the details: genetic variation in introduced populations and its contributions to invasion

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Prospects for building the tree of life from large sequence databases

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genome scans for detecting footprints of local adaptation using a Bayesian factor model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Mutations arising in the wave front of an expanding population

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Heritable epigenetic variation among maize inbreds

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Surfing during population expansions promotes genetic revolutions and structuration

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Detecting signatures of selection through haplotype differentiation among hierarchically structured populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

The biological limitations of transcriptomics in elucidating stress and stress responses

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Temperature sensitivities of cytosolic malate dehydrogenases from native and invasive species of marine mussels (genus Mytilus): sequence-function linkages and correlations with biogeographic distribution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Using linkage maps to correct and scaffold de novo genome assemblies: methods, challenges, and computational tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Induced spawning and culture techniques for the invasive ascidian Didemnum vexillum (Kott, 2002)

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Controlling false discoveries in genome scans for selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Predicting the probability of outbreeding depression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Transcriptomic resilience to global warming in the seagrass Zostera marina, a marine foundation species

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genome-wide approaches to the study of adaptive gene expression evolution: systematic studies of evolutionary adaptations involving gene expression will allow many fundamental questions in evolutionary biology to be addressed

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Gene expression drives local adaptation in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Evidence for widespread adaptive evolution of gene expression in budding yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

The next generation of molecular markers from massively parallel sequencing of pooled DNA samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genome-Wide Scan for Adaptive Divergence and Association with Population-Specific Covariates

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

The effect of RAD allele dropout on the estimation of genetic variation within and between populations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

DNA methylation patterns provide insight into epigenetic regulation in the Pacific oyster (Crassostrea gigas).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Reference-free population genomics from next-generation transcriptome data and the vertebrate-invertebrate gap

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Cryptic invasions of the crab Carcinus detected by molecular phylogeography

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Pleistocene separation of mitochondrial lineages of Mytilus spp. mussels from Northern and Southern Hemispheres and strong genetic differentiation among southern populations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Multiple introductions and invasion pathways for the invasive ctenophore Mnemiopsis leidyi in Eurasia

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

RNA-seq reveals regional differences in transcriptome response to heat stress in the marine snail Chlorostoma funebralis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Coping with cold: An integrative, multitissue analysis of the transcriptome of a poikilothermic vertebrate

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Ecological and evolutionary consequences of coastal invasions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Robust identification of local adaptation from allele frequencies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Population genomic evidence for adaptive differentiation in the Baltic Sea herring

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Detection of epigenetic variations in the protoplast-derived germlings of Ulva reticulata using methylation sensitive amplification polymorphism (MSAP).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Invasive alien Crustacea: dispersal, establishment, impact and control

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Gene expression profiling in gills of the great spider crab Hyas araneus in response to ocean acidification and warming

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

The spatial spread of invasions: new developments in theory and evidence

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Key Questions on the Role of Phenotypic Plasticity in Eco-Evolutionary Dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genetic population structure and contemporary dispersal patterns of a recent European invader, the Chinese mitten crab, Eriocheir sinensis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Population genomics of Pacific lamprey: adaptive variation in a highly dispersive species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genetic consequences of climatic oscillations in the Quaternary

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Mechanisms for the prevention of marine bioinvasions for better biosecurity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Origin of the antitropical distribution pattern in marine mussels ( Mytilus spp.): routes and timing of transequatorial migration

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genetic analysis along an invasion pathway reveals endemic cryptic taxa, but a single species with little population structure in the introduced range

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Finding the Genomic Basis of Local Adaptation: Pitfalls, Practical Solutions, and Future Directions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Detecting genetic responses to environmental change

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Phenotypic plasticity in two marine snails: constraints superseding life history

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Transcriptome changes in Eriocheir sinensis megalopae after desalination provide insights into osmoregulation and stress adaption in larvae

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genetic variation in life-history reaction norms in a marine fish.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Targeted capture in evolutionary and ecological genomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Repbase Update, a database of eukaryotic repetitive elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genomic divergence between the migratory and stationary ecotypes of Atlantic cod.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

21 January 2018

Ecological epigenetics

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Molecular genetics and genomics generate new insights into invertebrate pest invasions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

The Fate of Mutations Surfing on the Wave of a Range Expansion

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

PANNZER: high-throughput functional annotation of uncharacterized proteins in an error-prone environment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Fishing for divergence in a sea of connectivity: The utility of ddRADseq genotyping in a marine invertebrate, the black-lip pearl oyster Pinctada margaritifera.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Shape variation in the least killifish: ecological associations of phenotypic variation and the effects of a common garden

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Gene expression analysis for the identification of selection and local adaptation in fishes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Evolutionary genetics of invasive species

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

De novo assembly of a transcriptome for Calanus finmarchicus (Crustacea, Copepoda)--the dominant zooplankter of the North Atlantic Ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Marine introductions in the Southern Ocean: an unrecognised hazard to biodiversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Transcriptome analysis and discovery of genes involved in immune pathways from hepatopancreas of microbial challenged mitten crab Eriocheir sinensis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Transcriptome sequencing revealed the genes and pathways involved in salinity stress of Chinese mitten crab, Eriocheir sinensis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

DNA methylation is associated with expression level changes of galectin gene in mantle wound healing process of pearl oyster, Pinctada fucata

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Patterns of DNA methylation throughout a range expansion of an introduced songbird

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Environmental selection on transcriptome-derived SNPs in a high gene flow marine fish, the Atlantic herring (Clupea harengus).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

RNA-seq differential expression studies: more sequence or more replication?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Transcriptomic responses to salinity stress in invasive and native blue mussels (genus Mytilus).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Transcriptomic responses to heat stress in invasive and native blue mussels (genus Mytilus): molecular correlates of invasive success

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Rapid increase in dispersal during range expansion in the invasive ladybird Harmonia axyridis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genome scans for the contemporary response to selection in quantitative traits

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Evaluation of demographic history and neutral parameterization on the performance of FST outlier tests

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Comparative study of de novo assembly and genome-guided assembly strategies for transcriptome reconstruction based on RNA-Seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Transcriptome analysis of Portunus trituberculatus in response to salinity stress provides insights into the molecular basis of osmoregulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Target-enrichment strategies for next-generation sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

DNA methylation: A source of random variation in natural populations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Epigenetics and evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Population genomics of rapid adaptation by soft selective sweeps.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Epigenomics in marine fishes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Contrasting Frequencies and Effects of cis- and trans-Regulatory Mutations Affecting Gene Expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Polymerase chain reaction-single strand conformation polymorphism analyses of nuclear and chloroplast DNA provide evidence for recombination, multiple introductions and nascent speciation in the Caulerpa taxifolia complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Completing the human genome: the progress and challenge of satellite DNA assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Outlier SNP markers reveal fine-scale genetic structuring across European hake populations (Merluccius merluccius).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Phylogenetic analyses reveal extensive cryptic speciation and host specialization in an economically important mite taxon.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Assessing the global threat of invasive species to marine biodiversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

RNA-Seq in Mytilus galloprovincialis: comparative transcriptomics and expression profiles among different tissues.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Assembly, Assessment, and Availability of De novo Generated Eukaryotic Transcriptomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Epigenetic reprogramming in mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Applications of next-generation sequencing technologies in functional genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

A First Insight into the Genome of the Filter-Feeder Mussel Mytilus galloprovincialis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Classification of non-indigenous species based on their impacts: considerations for application in marine management

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

MEDITERRANEAN CAULERPA TAXIFOLIA AND C. MEXICANA (CHLOROPHYTA) ARE NOT CONSPECIFIC

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Developmental expression of homeobox genes in the ctenophore Mnemiopsis leidyi

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Development of highly reliable in silico SNP resource and genotyping assay from exome capture and sequencing: an example from black spruce (Picea mariana).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Beyond FST: Analysis of population genetic data for conservation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

The Biology of Invasions: The Genetic Adaptation Paradox

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Evolutionary change during experimental ocean acidification

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model species

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Invasion and the evolution of speed in toads

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Update on the environmental and economic costs associated with alien-invasive species in the United States

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Accurate Transposable Element Annotation Is Vital When Analyzing New Genome Assemblies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Agricultural applications of insect ecological genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Asymmetric dispersal allows an upstream region to control population structure throughout a species' range

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Adaptation - not by sweeps alone

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

dDocent: a RADseq, variant-calling pipeline designed for population genomics of non-model organisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Demystifying the RAD fad.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

lncRNAdb v2.0: expanding the reference database for functional long noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Transgenerational inheritance of epigenetic states at the murine Axin(Fu) allele occurs after maternal and paternal transmission

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

An intracellular transcriptomic atlas of the giant coenocyte Caulerpa taxifolia

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Epigenetics and plant evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

A practical guide to environmental association analysis in landscape genomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Microsatellites reveal origin and genetic diversity of Eurasian invasions by one of the world's most notorious marine invader, Mnemiopsis leidyi (Ctenophora).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Evolutionary Significance of Epigenetic Variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

De Novo Assembly and Characterization of the Invasive Northern Pacific Seastar Transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Multiple dispersal vectors drive range expansion in an invasive marine species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

5-Methylcytosine as an Endogenous Mutagen in the Human LDL Receptor and p53 Genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in non-model taxa

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Epigenetic features in the oyster Crassostrea gigas suggestive of functionally relevant promoter DNA methylation in invertebrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

A genetic perspective on rapid evolution in cane toads (Rhinella marina).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Diluting the founder effect: cryptic invasions expand a marine invader's range.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Paradox lost: genetic diversity and the success of aquatic invasions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

A global invader at home: population structure of the green crab, Carcinus maenas, in Europe

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Comparative studies of gene expression and the evolution of gene regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Target capture and massive sequencing of genes transcribed in Mytilus galloprovincialis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

The genome of the ctenophore Mnemiopsis leidyi and its implications for cell type evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genome-wide detection and characterization of positive selection in human populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Comparison of custom capture for targeted next-generation DNA sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Local adaptation in marine invertebrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Local selection and latitudinal variation in a marine predator-prey interaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Ecological and evolutionary insights from species invasions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Evaluating the performance of selection scans to detect selective sweeps in domestic dogs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Sequencing pools of individuals — mining genome-wide polymorphism data without big funding

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genomic organization, evolution, and expression of photoprotein and opsin genes in Mnemiopsis leidyi: a new view of ctenophore photocytes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Epigenetic Variation May Compensate for Decreased Genetic Variation with Introductions: A Case Study Using House Sparrows (Passer domesticus) on Two Continents

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Detection and removal of PCR duplicates in population genomic ddRAD studies by addition of a degenerate base region (DBR) in sequencing adapters

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

The Global Invertebrate Genomics Alliance (GIGA): developing community resources to study diverse invertebrate genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Temperature during embryonic development has persistent effects on thermal acclimation capacity in zebrafish.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genetic isolation by environment or distance: which pattern of gene flow is most common?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Construction of a high-density genetic map and mapping of a sex-linked locus for the brown alga Undaria pinnatifida (Phaeophyceae) based on large scale marker development by specific length amplified fragment (SLAF) sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

De novo transcriptome analysis of the gametophyte of Undaria pinnatifida (Phaeophyceae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

The more pieces, the better the puzzle: sperm concentration increases gametic compatibility.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

An evolutionary process that assembles phenotypes through space rather than through time

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Nonmethylated transposable elements and methylated genes in a chordate genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Draft genome of the Chinese mitten crab, Eriocheir sinensis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Stick insect genomes reveal natural selection's role in parallel speciation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Signatures of positive selection: from selective sweeps at individual loci to subtle allele frequency changes in polygenic adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Seasonal and latitudinal acclimatization of cardiac transcriptome responses to thermal stress in porcelain crabs, Petrolisthes cinctipes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Zoogeographic Distributions of the Sibling Species Mytilus galloprovincialis and M. trossulus (Bivalvia: Mytilidae) and Their Hybrids in the North Pacific.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genetic diversity and population structure of the Chinese mitten crab Eriocheir sinensis in its native range

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Comparison of solution-based exome capture methods for next generation sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genome-wide analysis of DNA methylation in five tissues of Zhikong scallop, Chlamys farreri

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

lncRScan-SVM: A Tool for Predicting Long Non-Coding RNAs Using Support Vector Machine

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Selection versus demography: a multilocus investigation of the domestication process in maize.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Adaptation in marine invasion: a genetic perspective

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Transcriptome sequencing reveals both neutral and adaptive genome dynamics in a marine invader

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

European green crabs (Carcinus maenas) in the northeastern Pacific: genetic evidence for high population connectivity and current-mediated expansion from a single introduced source population

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Construction of a High-Density Genetic Map and Quantitative Trait Locus Mapping in the Sea Cucumber Apostichopus japonicus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Advances and limits of using population genetics to understand local adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Degenerate adaptor sequences for detecting PCR duplicates in reduced representation sequencing data improve genotype calling accuracy

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Transcriptomic response of sea urchin larvae Strongylocentrotus purpuratus to CO2-driven seawater acidification

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Gene discovery through transcriptome sequencing for the invasive mussel Limnoperna fortunei

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

A toad more traveled: the heterogeneous invasion dynamics of cane toads in Australia

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genetic diversity in Undaria pinnatifida (Laminariales, Phaeophyceae) deduced from mitochondria genes – origins and succession of introduced populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Rapid genetic adaptation precedes the spread of an exotic plant species

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Linking concepts in the ecology and evolution of invasive plants: network analysis shows what has been most studied and identifies knowledge gaps

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Detection of selective sweeps in structured populations: a comparison of recent methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

De novo assembly of the Carcinus maenas transcriptome and characterization of innate immune system pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Epigenetics in ecology and evolution: what we know and what we need to know

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Neutral and adaptive variation in gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Reliable Detection of Loci Responsible for Local Adaptation: Inference of a Null Model through Trimming the Distribution of F(ST).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Indirect measures of gene flow and migration: FST not equal to 1/(4Nm + 1).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Pitfalls of predicting complex traits from SNPs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genomic signature of adaptation to climate in Medicago truncatula.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Ascidians as models for studying invasion success

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Complete Plastid Genome Sequence of the Brown Alga Undaria pinnatifida

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Comparative transcriptome analysis of two oysters, Crassostrea gigas and Crassostrea hongkongensis provides insights into adaptation to hypo-osmotic conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Invasion of the Black Sea by the ctenophore Mnemiopsis leidyi and recent changes in pelagic community structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Genetic diversity of Southern hemisphere blue mussels (Bivalvia: Mytilidae) and the identification of non-indigenous taxa

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4

Introduction of the northern Pacific asteroid Asterias amurensis to Tasmania: reproduction and current distribution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00227-016-2961-4