A First Insight into the Genome of the Filter-Feeder Mussel Mytilus galloprovincialis (Q35957430)

11 August 2017

A First Insight into the Genome of the Filter-Feeder Mussel Mytilus galloprovincialis (English)

1 reference

Mytilus galloprovincialis

11 August 2017

1 reference

5

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11 August 2017

Maria Murgarella

1

0 references

Carlos Canchaya

object named as

Carlos Canchaya

6

0 references

author name string

Daniela Puiu

2

1 reference

11 August 2017

Beatriz Novoa

3

1 reference

11 August 2017

Antonio Figueras

4

1 reference

11 August 2017

language of work or name

English

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publication date

15 March 2016

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11 August 2017

1 reference

11 August 2017

11

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11 August 2017

3

1 reference

11 August 2017

e0151561

1 reference

Creative Commons Attribution 4.0 International

11 August 2017

start time

15 March 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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2 October 2017

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Patterns of sequencing coverage bias revealed by ultra-deep sequencing of vertebrate mitochondria

2 October 2017

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Adaptive evolution of mitochondrial energy metabolism genes associated with increased energy demand in flying insects

2 October 2017

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Glacial history of the European marine mussels Mytilus, inferred from distribution of mitochondrial DNA lineages

2 October 2017

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Accommodating the load: The transposable element content of very large genomes

2 October 2017

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Kraken: ultrafast metagenomic sequence classification using exact alignments

2 October 2017

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Insights into hepatopancreatic functions for nutrition metabolism and ovarian development in the crab Portunus trituberculatus: gene discovery in the comparative transcriptome of different hepatopancreas stages

2 October 2017

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High genome heterozygosity and endemic genetic recombination in the wheat stripe rust fungus

2 October 2017

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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

2 October 2017

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The duck genome and transcriptome provide insight into an avian influenza virus reservoir species

2 October 2017

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Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach

2 October 2017

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The CHROMEVALOA database: a resource for the evaluation of Okadaic Acid contamination in the marine environment based on the chromatin-associated transcriptome of the mussel Mytilus galloprovincialis

2 October 2017

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Whole mitochondrial genome scan for population structure and selection in the Atlantic herring

2 October 2017

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Insights into bilaterian evolution from three spiralian genomes

2 October 2017

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How important are transposons for plant evolution?

2 October 2017

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Exploring Pandora's box: potential and pitfalls of low coverage genome surveys for evolutionary biology

2 October 2017

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Genomic evidence for elevated mutation rates in highly expressed genes

2 October 2017

1 reference

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The oyster genome reveals stress adaptation and complexity of shell formation

2 October 2017

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The impact of transposable elements on eukaryotic genomes: from genome size increase to genetic adaptation to stressful environments

2 October 2017

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Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data

2 October 2017

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Fast gapped-read alignment with Bowtie 2

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Draft genome of the pearl oyster Pinctada fucata: a platform for understanding bivalve biology

2 October 2017

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Hypoxia promotes isocitrate dehydrogenase-dependent carboxylation of α-ketoglutarate to citrate to support cell growth and viability

2 October 2017

1 reference

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InterPro in 2011: new developments in the family and domain prediction database

2 October 2017

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Massively parallel amplicon sequencing reveals isotype-specific variability of antimicrobial peptide transcripts in Mytilus galloprovincialis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Kinesin motors and primary cilia

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Identification of reproduction-specific genes associated with maturation and estrogen exposure in a marine bivalve Mytilus edulis.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Genome sequence and analysis of the tuber crop potato

2 October 2017

1 reference

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New insights into the apoptotic process in mollusks: characterization of caspase genes in Mytilus galloprovincialis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Insights into the innate immunity of the Mediterranean mussel Mytilus galloprovincialis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

2 October 2017

1 reference

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Positive selection on the killer whale mitogenome

2 October 2017

1 reference

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Linking the mitochondrial genotype to the organismal phenotype

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Pyrosequencing of Mytilus galloprovincialis cDNAs: tissue-specific expression patterns

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

The sequence and de novo assembly of the giant panda genome

2 October 2017

1 reference

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Identifying repeats and transposable elements in sequenced genomes: how to find your way through the dense forest of programs.

2 October 2017

1 reference

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The genome of the cucumber, Cucumis sativus L

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Kinesin superfamily motor proteins and intracellular transport

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Paternal mtDNA and maleness are co-inherited but not causally linked in mytilid mussels

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

What can you do with 0.1× genome coverage? A case study based on a genome survey of the scuttle fly Megaselia scalaris (Phoridae)

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

The Sequence Alignment/Map format and SAMtools

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

MytiBase: a knowledgebase of mussel (M. galloprovincialis) transcribed sequences

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Assessing the gene space in draft genomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Low-pass shotgun sequencing of the barley genome facilitates rapid identification of genes, conserved non-coding sequences and novel repeats

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Pathology and mass mortality of Pacific oysters, Crassostrea gigas (Thunberg), in 2005 at the East Frisian coast, Germany

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Efflux transporters: newly appreciated roles in protection against pollutants

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

DNA transposons and the evolution of eukaryotic genomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Understanding marine mussel adhesion

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

The unusual system of doubly uniparental inheritance of mtDNA: isn't one enough?

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Repetitive sequences in complex genomes: structure and evolution

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Synergy between sequence and size in Large-scale genomics

2 October 2017

1 reference

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Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

2 October 2017

1 reference

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Multidrug resistance proteins: role of P-glycoprotein, MRP1, MRP2, and BCRP (ABCG2) in tissue defense

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

When hypoxia signalling meets the ubiquitin-proteasomal pathway, new targets for cancer therapy

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Evidence that the large noncoding sequence is the main control region of maternally and paternally transmitted mitochondrial genomes of the marine mussel (Mytilus spp.).

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Gene finding in novel genomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Versatile and open software for comparing large genomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Towards a catalogue of genes transcribed in multiple tissues of Mytilus galloprovincialis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

The generic genome browser: a building block for a model organism system database

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

The exceptional mitochondrial DNA system of the mussel family Mytilidae

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Penelope, a new family of transposable elements and its possible role in hybrid dysgenesis in Drosophila virilis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

An unusual type of mitochondrial DNA inheritance in the blue mussel Mytilus

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Sex-limited mitochondrial DNA transmission in the marine mussel Mytilus edulis.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

A hybrid dysgenesis syndrome in Drosophila virilis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Basic local alignment search tool

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

The multixenobiotic resistance mechanism in aquatic organisms

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Yeast mutation accumulation experiment supports elevated mutation rates at highly transcribed sites

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

The complete maternal and paternal mitochondrial genomes of the Mediterranean mussel Mytilus galloprovincialis: implications for the doubly uniparental inheritance mode of mtDNA.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Molecular characterization of the mutable flaked allele for flower variegation in the common morning glory

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Evidence for intragenic recombination within a novel genetic marker that distinguishes mussels in the Mytilus edulis species complex.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Comparative population genomics in animals uncovers the determinants of genetic diversity.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Genome structure analysis of molluscs revealed whole genome duplication and lineage specific repeat variation.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Are nucleosome positions in vivo primarily determined by histone-DNA sequence preferences?

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Tidal height influences the levels of enzymatic antioxidant defences in Mytilus edulis

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Characterization of mussel gill cells in vivo and in vitro

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Accelerated evolution of the electron transport chain in anthropoid primates.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Assortative fertilization and selection at larval stage in the mussels Mytilus edulis and M. galloprovincialis

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

hobo is responsible for the induction of hybrid dysgenesis by strains of Drosophila melanogaster bearing the male recombination factor 23.5MRF.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Effects of ocean acidification on the immune response of the blue mussel Mytilus edulis

24 September 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0151561

Glutamate synthase and the synthesis of glutamate in plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0151561

Study of Diseases and the Immune System of Bivalves Using Molecular Biology and Genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0151561

ABCB- and ABCC-type transporters confer multixenobiotic resistance and form an environment-tissue barrier in bivalve gills

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4792442

Expressions of oxidative stress-related genes and antioxidant enzyme activities in Mytilus galloprovincialis (Bivalvia, Mollusca) exposed to hypoxia

5 December 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0151561

Nucleotide content gradients in maternally and paternally inherited mitochondrial genomes of the mussel Mytilus

21 January 2018

1 reference

12 December 2020

First draft genome sequence of the Japanese eel, Anguilla japonica

1 reference

12 December 2020

Presidential address. Transposable elements, epigenetics, and genome evolution

1 reference

12 December 2020

ASYMMETRIC INTROGRESSION OF MITOCHONDRIAL DNA AMONG EUROPEAN POPULATIONS OF BLUE MUSSELS (MYTILUS SPP.).

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0151561

Identifiers

DOI

1 reference

11 August 2017

0 references

1 reference

11 August 2017

PubMed publication ID

26977809

1 reference