Parmelia sulcata (Ascomycota: Parmeliaceae), a sympatric monophyletic species complex (Q56037671)

inferred from title

author

Pradeep Kumar Divakar

object named as

Pradeep K. DIVAKAR

2

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Ana Crespo

object named as

Ana CRESPO

7

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author name string

Maria del Carmen MOLINA

1

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Ana M. MILLANES

3

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Edinson SÁNCHEZ

4

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Ruth DEL-PRADO

5

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David L. HAWKSWORTH

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

6

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publication date

5 October 2011

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published in

The Lichenologist

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volume

43

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issue

06

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page(s)

585-601

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cites work

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Recent developments in the MAFFT multiple sequence alignment program

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Comparative genomics and concerted evolution of beta-tubulin paralogs in Leishmania spp.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Accommodating phylogenetic uncertainty in evolutionary studies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

MRBAYES: Bayesian inference of phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

An Empirical Test of Bootstrapping as a Method for Assessing Confidence in Phylogenetic Analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Where are all the undescribed fungi?

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

The magnitude of fungal diversity: the 1.5 million species estimate revisited

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

A Monograph of the Lichen Genus Parmelia Acharius sensu stricto (Ascomycotina: Parmeliaceae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Patterns of group I intron presence in nuclear SSU rDNA of the Lichen family Parmeliaceae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

An exceptional group-I intron-like insertion in the SSU rDNA of lichen mycobionts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Slippery when wet: phylogeny and character evolution in the gelatinous cyanobacterial lichens (Peltigerales, Ascomycetes).

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

ITS primers with enhanced specificity for basidiomycetes--application to the identification of mycorrhizae and rusts

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

The taxonomy of the Caloplaca citrina group ( Teloschistaceae) in the Black Sea region; with contributions to the cryptic species concept in lichenology

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Confidence Limits on Phylogenies: an Approach using the Bootstrap

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

The Species Pair Concept in Lichenology

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Phylogenetic species recognition and species concepts in fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Upper cortex anatomy corroborates phylogenetic hypothesis in species of Physconia (Ascomycota, Lecanoromycetes).

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Parmelia barrenoae, a new lichen species related to Parmelia sulcata (Parmeliaceae) based on molecular and morphological data

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Inferring confidence sets of possibly misspecified gene trees.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

A multilocus genealogical approach to phylogenetic species recognition in the model eukaryote Neurospora.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Divergent histories of rDNA group I introns in the lichen family Physciaceae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Different species problems and their resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Phylogeny and self-splicing ability of the plastid tRNA-Leu group I Intron.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

The general stochastic model of nucleotide substitution

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Ernst Mayr and the modern concept of species

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Numerous group I introns with variable distributions in the ribosomal DNA of a lichen fungus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Genetic distances within and among species in monophyletic lineages of Parmeliaceae (Ascomycota) as a tool for taxon delimitation

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Molecular studies on Punctelia species of the Iberian Peninsula, with an emphasis on specimens newly colonizing Madrid

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Cryptic speciation in the cosmopolitan and clonal human pathogenic fungus Aspergillus fumigatus

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

MODELTEST: testing the model of DNA substitution

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

The Potential of Mitochondrial DNA for Establishing Phylogeny and Stabilising Generic Concepts in the Parmelioid Lichens

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

jModelTest: phylogenetic model averaging

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

The lichen-forming ascomycete Evernia mesomorpha associates with multiple genotypes of Trebouxia jamesii

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Repeat-type distribution in trnL intron does not correspond with species phylogeny: comparison of the genetic markers 16S rRNA and trnL intron in heterocystous cyanobacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

DNA barcoding reveals overlooked marine fishes

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

The delimitation of Antarctic and bipolar species of neuropogonoid Usnea (Ascomycota, Lecanorales): a cohesion approach of species recognition for the Usnea perpusilla complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Multiple origins of fungal group I introns located in the same position of nuclear SSU rRNA gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Phylogeny of bipolar Cladonia arbuscula and Cladonia mitis (Lecanorales, Euascomycetes).

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Sequence insertions and ITS data provide congruent information on Roccella canariensis and R. tuberculata (Arthoniales, Euascomycetes) phylogeny

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Phylogenetic analysis of the Glomeromycota by partial beta-tubulin gene sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Cryptic species in lichen-forming fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Cryptic species as a window on diversity and conservation

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Molecular phylogenetic studies reveal an undescribed species within the North American concept of Melanelixia glabra (Parmeliaceae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Molecular phylogenetic studies on the Parmotrema reticulatum (syn. Rimelia reticulata) complex, including the confirmation of P. pseudoreticulatum as a distinct species

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Using genetic distances in addition to ITS molecular phylogeny to identify potential species in the Parmotrema reticulatum complex: a case study

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

rDNA ITS and β-tubulin gene sequence analyses reveal two monophyletic groups within the cosmopolitan lichen Parmelia saxatilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Comparison of rRNA genotype frequencies ofParmelia sulcata from long established and recolonizing sites following sulphur dioxide amelioration

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Cryptic species and species pairs in lichens: A discussion on the relationship between molecular phylogenies and morphological characters

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Conundrums in species concepts: the discovery of a new cryptic species segregated from Parmelina tiliacea (Ascomycota: Parmeliaceae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Phylogenetic relationships and species concepts in Parmelia s. str. (Parmeliaceae) inferred from nuclear ITS rDNA and -tubulin sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Parmelina quercina (Parmeliaceae, Lecanorales) includes four phylogenetically supported morphospecies

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

AMPLIFICATION AND DIRECT SEQUENCING OF FUNGAL RIBOSOMAL RNA GENES FOR PHYLOGENETICS

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

Another example of cryptic diversity in lichen-forming fungi: the new species Parmelia mayi (Ascomycota: Parmeliaceae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

7 January 2021

Evolutionary relationships among beta-tubulin gene sequences of basidiomycetous fungi

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

7 January 2021

Monophyletic groups within the Parmeliaceae identified by ITS rDNA, β-tubulin and GAPDH sequences

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

7 January 2021

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

7 January 2021

Ribosomal DNA and β-tubulin data do not support the separation of the lichens Usnea florida and U. subfloridana as distinct species

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

7 January 2021

The cyanobacterial origin and vertical transmission of the plastid tRNA(Leu) group-I intron

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

7 January 2021

Molecular phylogeny of the Sphaerophorus globosus species complex

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

7 January 2021

Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

7 January 2021

Large genetic divergence of new, morphologically similar species of sterile lichens from Europe (Lepraria, Stereocaulaceae, Ascomycota): concordance of DNA sequence data with secondary metabolites

1 reference

https://api.crossref.org/works/10.1017%2FS0024282911000521

7 January 2021