PDBe: Protein Data Bank in Europe (Q55071290)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21045060%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

title

PDBe: Protein Data Bank in Europe (English)

1 reference

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15 January 2020

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15 January 2020

Matthew J Conroy

7

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15 January 2020

Glen van Ginkel

9

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15 January 2020

Swanand Gore

11

1 reference

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15 January 2020

Aleksandras Gutmanas

12

1 reference

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15 January 2020

Sanchayita Sen

25

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15 January 2020

Wim F. Vranken

31

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15 January 2020

Gerard Kleywegt

33

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15 January 2020

Ségolène Caboche

6

1 reference

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15 January 2020

Jose M Dana

8

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15 January 2020

Pauline Haslam

13

1 reference

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15 January 2020

Ingvar Lagerstedt

16

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15 January 2020

Saqib Mir

17

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Alan Wilter Sousa da Silva

15 January 2020

27

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15 January 2020

Jawahar Swaminathan

29

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15 January 2020

10

Adel Golovin

1 reference

15 January 2020

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14

Miriam Hirshberg

1 reference

15 January 2020

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23

Gaurav Sahni

1 reference

15 January 2020

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22

Luana Rinaldi

1 reference

15 January 2020

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4

Christoph Best

1 reference

15 January 2020

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2

Younes Alhroub

1 reference

15 January 2020

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Anaëlle Alili

3

1 reference

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15 January 2020

Harry C Boutselakis

5

1 reference

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15 January 2020

Melford John

15

1 reference

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15 January 2020

Laurence E Newman

18

1 reference

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15 January 2020

Tom J Oldfield

19

1 reference

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15 January 2020

Chris J Penkett

20

1 reference

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15 January 2020

Jorge Pineda-Castillo

21

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15 January 2020

Grégoire Sawka

24

1 reference

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15 January 2020

Robert Slowley

26

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15 January 2020

Antonio Suarez-Uruena

28

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15 January 2020

Martyn F Symmons

30

1 reference

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15 January 2020

Michael Wainwright

32

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15 January 2020

publication date

2 November 2010

1 reference

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15 January 2020

language of work or name

English

0 references

published in

Nucleic Acids Research

1 reference

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15 January 2020

volume

39

1 reference

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15 January 2020

issue

Database issue

1 reference

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15 January 2020

page(s)

D402-10

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Creative Commons Attribution-NonCommercial 2.5 Generic

15 January 2020

copyright license

start time

14 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Straightforward and complete deposition of NMR data to the PDBe

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

Validation of archived chemical shifts through atomic coordinates

18 June 2018

1 reference

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BioCatalogue: a universal catalogue of web services for the life sciences

18 June 2018

1 reference

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Chemical Entities of Biological Interest: an update

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

The NMR restraints grid at BMRB for 5,266 protein and nucleic acid PDB entries

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

The GOA database in 2009--an integrated Gene Ontology Annotation resource

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

Database resources of the National Center for Biotechnology Information

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

InterPro: the integrative protein signature database

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

The Universal Protein Resource (UniProt) 2009

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

MSDmotif: exploring protein sites and motifs

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

Protein structure databases with new web services for structural biology and biomedical research

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

The Pfam protein families database

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

18 June 2018

The 20 years of PROSITE

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

Data growth and its impact on the SCOP database: new developments

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

Inference of macromolecular assemblies from crystalline state

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

The CATH domain structure database: new protocols and classification levels give a more comprehensive resource for exploring evolution

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

The RCSB PDB information portal for structural genomics

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

E-MSD: improving data deposition and structure quality

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

InterProScan: protein domains identifier

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

RECOORD: a recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

The CCPN data model for NMR spectroscopy: development of a software pipeline

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

E-MSD: an integrated data resource for bioinformatics

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

EMDep: a web-based system for the deposition and validation of high-resolution electron microscopy macromolecular structural information

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

New electron microscopy database and deposition system

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

The distributed annotation system

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

NMR structure of the hRap1 Myb motif reveals a canonical three-helix bundle lacking the positive surface charge typical of Myb DNA-binding domains

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

NMR solution structure and receptor peptide binding of the CC chemokine eotaxin-2

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

OLDERADO: on-line database of ensemble representatives and domains. On Line Database of Ensemble Representatives And DOmains

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

Rapid and sensitive protein similarity searches

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

The Protein Data Bank: a computer-based archival file for macromolecular structures

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

Safeguarding the integrity of protein archive

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

The Protein Data Bank: a historical perspective

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

2.2 A refined crystal structure of the catalytic subunit of cAMP-dependent protein kinase complexed with MnATP and a peptide inhibitor

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

DRESS: a database of REfined solution NMR structures.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3013808

PDBe: Protein Data Bank in Europe

13 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ985

PatMatch: a program for finding patterns in peptide and nucleotide sequences

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ985

Science friction as fantasy irritates religious sensibilities

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ985

Database resources of the National Center for Biotechnology Information

21 January 2018

1 reference

COCI

https://opencitations.net/index/api/v1/references/10.1093/NAR/GKQ985

9 September 2024

Identifiers

DOI

10.1093/NAR/GKQ985

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21045060%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/VelankarAABBCCDGGGGHHJLMNOPPRSSSSSSSSVWK11

15 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21045060%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

PubMed publication ID

21045060

1 reference