A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters. (Q50421780)

http://europepmc.org/abstract/MED/29483642

13 March 2018

title

A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters. (English)

1 reference

http://europepmc.org/abstract/MED/29483642

13 March 2018

main subject

directed evolution

0 references

corrigendum / erratum

Publisher Correction: A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters.

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author

Eftychios A Pnevmatikakis

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Daniel Hochbaum

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Jeffrey L Rhoades

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Young-Gyu Yoon

16

1 reference

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5 June 2020

Limor Freifeld

17

1 reference

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5 June 2020

Thomas Hughes

21

1 reference

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5 June 2020

Steven W. Flavell

25

1 reference

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5 June 2020

Bernardo L. Sabatini

26

1 reference

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5 June 2020

27

Edward S Boyden

1 reference

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5 June 2020

author name string

Kiryl D Piatkevich

1

1 reference

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5 June 2020

Erica E Jung

2

1 reference

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5 June 2020

Christoph Straub

3

1 reference

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5 June 2020

Changyang Linghu

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Demian Park

5

1 reference

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5 June 2020

Ho-Jun Suk

6

1 reference

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5 June 2020

Daniel Goodwin

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Nikita Pak

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Takashi Kawashima

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Chao-Tsung Yang

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Or Shemesh

14

1 reference

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5 June 2020

Shoh Asano

15

1 reference

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5 June 2020

Jessica L Saulnier

18

1 reference

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5 June 2020

Clemens Riegler

19

1 reference

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5 June 2020

Florian Engert

20

1 reference

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5 June 2020

Mikhail Drobizhev

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Balint Szabo

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Misha B Ahrens

24

1 reference

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5 June 2020

publication date

26 February 2018

1 reference

http://europepmc.org/abstract/MED/29483642

13 March 2018

published in

Nature Chemical Biology

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

volume

14

1 reference

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5 June 2020

page(s)

352-360

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5 June 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

5 June 2020

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC5866759/fullTextXML

inferred from PubMed Central ID database lookup

exact match

https://scigraph.springernature.com/pub.10.1038/s41589-018-0004-9

0 references

cites work

Temporally precise single-cell-resolution optogenetics.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Droplet Microfluidic Flow Cytometer For Sorting On Transient Cellular Responses Of Genetically-Encoded Sensors.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Genetically encoded indicators of neuronal activity

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

High-speed recording of neural spikes in awake mice and flies with a fluorescent voltage sensor

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Optogenetics and the future of neuroscience

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Methods for the directed evolution of proteins

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Feedback from network states generates variability in a probabilistic olfactory circuit.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Swept confocally-aligned planar excitation (SCAPE) microscopy for high speed volumetric imaging of behaving organisms

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Synthetic biology for the directed evolution of protein biocatalysts: navigating sequence space intelligently

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Microfluidics-based selection of red-fluorescent proteins with decreased rates of photobleaching

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Archaerhodopsin variants with enhanced voltage-sensitive fluorescence in mammalian and Caenorhabditis elegans neurons

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Directed evolution of a far-red fluorescent rhodopsin

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Noninvasive optical inhibition with a red-shifted microbial rhodopsin

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Microfluidic cell sorter-aided directed evolution of a protein-based calcium ion indicator with an inverted fluorescent response

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

High-fidelity optical reporting of neuronal electrical activity with an ultrafast fluorescent voltage sensor

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Imaging neural spiking in brain tissue using FRET-opsin protein voltage sensors.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Zebrafish models for translational neuroscience research: from tank to bedside

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Engineering and characterizing monomeric fluorescent proteins for live-cell imaging applications.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Visualizing samples with box plots

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Independent optical excitation of distinct neural populations

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Ultrasensitive fluorescent proteins for imaging neuronal activity

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Far-red light photoactivatable near-infrared fluorescent proteins engineered from a bacterial phytochrome

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Adoption of the Q transcriptional regulatory system for zebrafish transgenesis

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Whole-brain functional imaging at cellular resolution using light-sheet microscopy

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Cell sorting in a Petri dish controlled by computer vision

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Laser-based directed release of array elements for efficient collection into targeted microwells

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Brain-wide neuronal dynamics during motor adaptation in zebrafish.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

A divide-and-conquer approach to determine the Pareto frontier for optimization of protein engineering experiments

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Directed molecular evolution to design advanced red fluorescent proteins

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Optical recording of action potentials in mammalian neurons using a microbial rhodopsin

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Vectors bicistronically linking a gene of interest to the SV40 large T antigen in combination with the SV40 origin of replication enhance transient protein expression and luciferase reporter activity

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Bright and stable near-infrared fluorescent protein for in vivo imaging

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Circuit neuroscience in zebrafish.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Synthetic physiology strategies for adapting tools from nature for genetically targeted control of fast biological processes.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Two-photon absorption properties of fluorescent proteins

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Induced transmembrane voltage and its correlation with electroporation-mediated molecular transport

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Systematic comparison of constitutive promoters and the doxycycline-inducible promoter

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Molecular and cellular approaches for diversifying and extending optogenetics

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

High-performance genetically targetable optical neural silencing by light-driven proton pumps

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Measuring the induced membrane voltage with Di-8-ANEPPS.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Optogenetic dissection of a behavioural module in the vertebrate spinal cord

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Design of protein-interaction specificity gives selective bZIP-binding peptides.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

V2a and V2b neurons are generated by the final divisions of pair-producing progenitors in the zebrafish spinal cord.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Two-photon absorption standards in the 550-1600 nm excitation wavelength range

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

The Tol2kit: a multisite gateway-based construction kit for Tol2 transposon transgenesis constructs

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

High Ca2+-phosphate transfection efficiency in low-density neuronal cultures.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Inhibition of gap junction currents by the abused solvent toluene

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Sample size determination

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Bacteriophytochrome controls photosystem synthesis in anoxygenic bacteria

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Approximating the nondominated front using the Pareto Archived Evolution Strategy

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Learning the parts of objects by non-negative matrix factorization

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Transfected DNA Is Mutated in Monkey, Mouse, and Human Cells

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

The genetics of Caenorhabditis elegans

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

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25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

Affinity binding phenomena of DNA onto apatite crystals

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5866759

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1 reference

Crossref

https://api.crossref.org/works/10.1038%2FS41589-018-0004-9

7 January 2021

inferred from DOI database lookup

Evaluating the biological relevance of putative enhancers using Tol2 transposon-mediated transgenesis in zebrafish

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FS41589-018-0004-9

7 January 2021

inferred from DOI database lookup

Studying cell behavior in whole zebrafish embryos by confocal live imaging: application to hematopoietic stem cells

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FS41589-018-0004-9

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/S41589-018-0004-9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29483642%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

1 reference