Antibody modeling using the prediction of immunoglobulin structure (PIGS) web server [corrected]. (Q47571305)

4 February 2018

title

Antibody modeling using the prediction of immunoglobulin structure (PIGS) web server [corrected]. (English)

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4 February 2018

Erratum: antibody modeling using the Prediction of ImmunoGlobulin Structure (PIGS) web server

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corrigendum / erratum

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DOI

10.1038/NPROT0415-644E

12 July 2019

http://api.crossref.org/works?select=update-to&filter=doi:10.1038/NPROT0415-644E

author

Paolo Marcatili

series ordinal

1

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4 February 2018

Anna Tramontano

series ordinal

4

object named as

Anna Tramontano

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4 February 2018

3

Anna Chailyan

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4 February 2018

2

Pier Paolo Olimpieri

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4 February 2018

publication date

6 November 2014

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4 February 2018

published in

Nature Protocols

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4 February 2018

volume

9

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4 February 2018

issue

12

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4 February 2018

page(s)

2771-2783

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4 February 2018

https://scigraph.springernature.com/pub.10.1038/nprot.2014.189

exact match

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H3-rules: identification of CDR-H3 structures in antibodies

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Systematic classification of CDR-L3 in antibodies: implications of the light chain subtypes and the VL-VH interface

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Structural repertoire of the human VH segments

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Framework residue 71 is a major determinant of the position and conformation of the second hypervariable region in the VH domains of immunoglobulins

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Modifications to canonical structure sequence patterns: analysis for L1 and L3.

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31 March 2020

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Analysis and prediction of VH/VL packing in antibodies.

31 March 2020

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Germline VH/VL pairing in antibodies

31 March 2020

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31 March 2020

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Antibody modeling assessment

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Crystal Structure and Computational Modeling of the Fab Fragment from a Protective Anti-Ricin Monoclonal Antibody

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31 March 2020

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Multi-constraint computational design suggests that native sequences of germline antibody H3 loops are nearly optimal for conformational flexibility

31 March 2020

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https://api.crossref.org/works/10.1038%2FNPROT.2014.189

A systematic comparison of free and bound antibodies reveals binding-related conformational changes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

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31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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31 March 2020

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https://api.crossref.org/works/10.1038%2FNPROT.2014.189

Immunoglobulin structure: variation in amino acid sequence and length of human lambda light chains

31 March 2020

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https://api.crossref.org/works/10.1038%2FNPROT.2014.189

Standard conformations for the canonical structures of immunoglobulins

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

Second antibody modeling assessment (AMA-II).

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

Improving the accuracy of the structure prediction of the third hypervariable loop of the heavy chains of antibodies

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

High-resolution modeling of antibody structures by a combination of bioinformatics, expert knowledge, and molecular simulations

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

Blind prediction performance of RosettaAntibody 3.0: grafting, relaxation, kinematic loop modeling, and full CDR optimization.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

The association of heavy and light chain variable domains in antibodies: implications for antigen specificity

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

Improved prediction of protein side-chain conformations with SCWRL4

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

LGA: A method for finding 3D similarities in protein structures

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

Scoring function for automated assessment of protein structure template quality

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

A structurally distinct human mycoplasma protein that generically blocks antigen-antibody union

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

Specific recognition of a DNA immunogen by its elicited antibody

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.189

Enhanced conformational diversity search of CDR-H3 in antibodies: role of the first CDR-H3 residue.

31 March 2020

1 reference

12 December 2020

Ig V gene mutation status and CD38 expression as novel prognostic indicators in chronic lymphocytic leukemia

1 reference

12 December 2020

Unmutated Ig V(H) genes are associated with a more aggressive form of chronic lymphocytic leukemia.

1 reference

12 December 2020

Unraveling the effect of changes in conformation and compactness at the antibody V(L)-V(H) interface upon antigen binding.

1 reference

12 December 2020

Humanization of antibodies.

1 reference

12 December 2020

Identifiers

DOI

10.1038/NPROT.2014.189

1 reference

4 February 2018

PubMed ID

25375991

1 reference

4 February 2018