Bacteria associated with decomposing dead wood in a natural temperate forest (Q46263888)

20 December 2017

title

Bacteria associated with decomposing dead wood in a natural temperate forest (English)

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20 December 2017

4

Petr Baldrian

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20 December 2017

author name string

Vojtech Tláskal

series ordinal

1

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20 December 2017

Petra Zrustová

series ordinal

2

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20 December 2017

Tomáš Vrška

series ordinal

3

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20 December 2017

publication date

8 November 2017

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20 December 2017

FEMS Microbiology Ecology

published in

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20 December 2017

volume

93

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20 December 2017

issue

12

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20 December 2017

CTFS-ForestGEO: a worldwide network monitoring forests in an era of global change.

cites work

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Microbial activity and the dynamics of ecosystem processes in forest soils

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Active and total microbial communities in forest soil are largely different and highly stratified during decomposition

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Phylogenetic distribution of potential cellulases in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Isolation of oxalotrophic bacteria able to disperse on fungal mycelium

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Rhodoplanes piscinae sp. nov. isolated from pond water

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Anaerobic oxalate consumption by microorganisms in forest soils

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Collimonas fungivorans gen. nov., sp. nov., a chitinolytic soil bacterium with the ability to grow on living fungal hyphae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Associations between species and groups of sites: indices and statistical inference.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

UPARSE: highly accurate OTU sequences from microbial amplicon reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

UCHIME improves sensitivity and speed of chimera detection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Humus bacteria of Norway spruce stands: plant growth promoting properties and birch, red fescue and alder colonizing capacity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Impact of white-rot fungi on numbers and community composition of bacteria colonizing beech wood from forest soil.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Impact of Phanerochaete chrysosporium on the Functional Diversity of Bacterial Communities Associated with Decaying Wood

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Network analysis reveals ecological links between N-fixing bacteria and wood-decaying fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

A pyrosequencing insight into sprawling bacterial diversity and community dynamics in decaying deadwood logs of Fagus sylvatica and Picea abies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Bacteria in decomposing wood and their interactions with wood-decay fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

MAFFT version 5: improvement in accuracy of multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Patterns of fungal communities among and within decaying logs, revealed by 454 sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Evidence for methane production by saprotrophic fungi.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Cellulose and hemicellulose decomposition by forest soil bacteria proceeds by the action of structurally variable enzymatic systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Interactions between soil- and dead wood-inhabiting fungal communities during the decay of Norway spruce logs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Inhibition of mushroom formation and induction of glycerol release-ecological strategies of Burkholderia terrae BS001 to create a hospitable niche at the fungus Lyophyllum sp. strain Karsten

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Telmatobacter bradus gen. nov., sp. nov., a cellulolytic facultative anaerobe from subdivision 1 of the Acidobacteria, and emended description of Acidobacterium capsulatum Kishimoto et al. 1991.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Validation and application of a PCR primer set to quantify fungal communities in the soil environment by real-time quantitative PCR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Fungal and bacterial community succession differs for three wood types during decay in a forest soil.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Identification of active methylotroph populations in an acidic forest soil by stable-isotope probing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Fungal community dynamics in relation to substrate quality of decaying Norway spruce ( Picea abies [L.] Karst.) logs in boreal forests

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Natural decay process affects the abundance and community structure of Bacteria and Archaea in Picea abies logs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Soil bacterial and fungal communities across a pH gradient in an arable soil.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Oxalic acid: a signal molecule for fungus-feeding bacteria of the genus Collimonas?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Transformation of Quercus petraea litter: successive changes in litter chemistry are reflected in differential enzyme activity and changes in the microbial community composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Small-scale spatial heterogeneity of ecosystem properties, microbial community composition and microbial activities in a temperate mountain forest soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Bacterial succession on decomposing leaf litter exhibits a specific occurrence pattern of cellulolytic taxa and potential decomposers of fungal mycelia.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Distinct ectomycorrhizospheres share similar bacterial communities as revealed by pyrosequencing-based analysis of 16S rRNA genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Phylogenetic composition and properties of bacteria coexisting with the fungus Hypholoma fasciculare in decaying wood

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Analysis of soil fungal communities by amplicon pyrosequencing: current approaches to data analysis and the introduction of the pipeline SEED

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

The variability of the 16S rRNA gene in bacterial genomes and its consequences for bacterial community analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Methylovirgula ligni gen. nov., sp. nov., an obligately acidophilic, facultatively methylotrophic bacterium with a highly divergent mxaF gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Fungal community on decomposing leaf litter undergoes rapid successional changes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Structure of the 16 S ribosomal RNA of the thermophilic cyanobacterium Chlorogloeopsis HTF ('Mastigocladus laminosus HTF') strain PCC7518, and phylogenetic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Nitrogenase gene diversity and microbial community structure: a cross-system comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Microbial activity in forest soil reflects the changes in ecosystem properties between summer and winter

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

Initial decay of woody fragments in soil is influenced by size, vertical position, nitrogen availability and soil origin

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIX157

21 January 2018

Identifiers

DOI

10.1093/FEMSEC/FIX157

1 reference

20 December 2017

PubMed ID

29126113

1 reference

20 December 2017