Thermodynamic and kinetic framework of selenocysteyl-tRNASec recognition by elongation factor SelB (Q42021596)

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scientific article published on 23 November 2009

Thermodynamic and Kinetic Framework of Selenocysteyl-tRNASecRecognition by Elongation Factor SelB

Language	Label	Description	Also known as
English	Thermodynamic and kinetic framework of selenocysteyl-tRNASec recognition by elongation factor SelB	scientific article published on 23 November 2009	Thermodynamic and Kinetic Framework of Selenocysteyl-tRNASecRecognition by Elongation Factor SelB

Statements

scholarly article

1 reference

Europe PubMed Central

15 October 2017

Thermodynamic and kinetic framework of selenocysteyl-tRNASec recognition by elongation factor SelB (English)

1 reference

Europe PubMed Central

15 October 2017

Andrey L. Konevega

2

1 reference

Europe PubMed Central

15 October 2017

3

1 reference

Europe PubMed Central

15 October 2017

author name string

Alena Paleskava

1

1 reference

Europe PubMed Central

15 October 2017

language of work or name

0 references

publication date

23 November 2009

1 reference

Europe PubMed Central

15 October 2017

Journal of Biological Chemistry

1 reference

Europe PubMed Central

15 October 2017

285

1 reference

Europe PubMed Central

15 October 2017

5

1 reference

Europe PubMed Central

15 October 2017

3014-3020

1 reference

Europe PubMed Central

15 October 2017

Towards understanding selenocysteine incorporation into bacterial proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Structural basis for dynamic interdomain movement and RNA recognition of the selenocysteine-specific elongation factor SelB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

The nucleotide-binding site of bacterial translation initiation factor 2 (IF2) as a metabolic sensor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Role and timing of GTP binding and hydrolysis during EF-G-dependent tRNA translocation on the ribosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Selenocysteine tRNA-specific elongation factor SelB is a structural chimaera of elongation and initiation factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Purine bases at position 37 of tRNA stabilize codon-anticodon interaction in the ribosomal A site by stacking and Mg2+-dependent interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Crystal structure of an mRNA-binding fragment of Moorella thermoacetica elongation factor SelB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

The tRNA specificity of Thermus thermophilus EF-Tu

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Uniform binding of aminoacyl-tRNAs to elongation factor Tu by thermodynamic compensation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Selenocysteine inserting tRNAs: an overview

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

The crystal structure of Cys-tRNACys-EF-Tu-GDPNP reveals general and specific features in the ternary complex and in tRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Complete kinetic mechanism of elongation factor Tu-dependent binding of aminoacyl-tRNA to the A site of the E. coli ribosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Antideterminants present in minihelix(Sec) hinder its recognition by prokaryotic elongation factor Tu.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and a GTP analog

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Kinetic studies of Escherichia coli elongation factor Tu-guanosine 5'-triphosphate-aminoacyl-tRNA complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Direct determination of the association constant between elongation factor Tu X GTP and aminoacyl-tRNA using fluorescence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Identification of a novel translation factor necessary for the incorporation of selenocysteine into protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

In vitro synthesis of selenocysteinyl-tRNA(UCA) from seryl-tRNA(UCA): involvement and characterization of the selD gene product

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Effects of nucleotide- and aurodox-induced changes in elongation factor Tu conformation upon its interactions with aminoacyl transfer RNA. A fluorescence study.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

The length of the aminoacyl-acceptor stem of the selenocysteine-specific tRNA(Sec) of Escherichia coli is the determinant for binding to elongation factors SELB or Tu.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Catalytic properties of an Escherichia coli formate dehydrogenase mutant in which sulfur replaces selenium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Ion effects on ligand-nucleic acid interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

5 June 2018

Single-step purification of specific tRNAs by hydrophobic tagging.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

17 August 2018

GTP-dependent recognition of the methionine moiety on initiator tRNA by translation factor eIF2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

17 August 2018

Purification and characterization of hexahistidine-tagged elongation factor SelB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

17 August 2018

Kinetic mechanism of elongation factor Ts-catalyzed nucleotide exchange in elongation factor Tu.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

17 August 2018

Evolutionary relationship between translation initiation factor eIF-2gamma and selenocysteine-specific elongation factor SELB: change of function in translation factors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

17 August 2018

Structural model for the selenocysteine-specific elongation factor SelB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

17 August 2018

Initial binding of the elongation factor Tu.GTP.aminoacyl-tRNA complex preceding codon recognition on the ribosome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

17 August 2018

Pentalysine-deoxyribonucleic acid interactions: a model for the general effects of ion concentrations on the interactions of proteins with nucleic acids.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2823455

17 August 2018

The twenty-first amino acid

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.081380

21 January 2018

Kinetics of the Interaction of Translation Factor SelB fromEscherichia coliwith Guanosine Nucleotides and Selenocysteine Insertion Sequence RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/19940162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kinetic Checkpoint at a Late Step in Translation Initiation

1 reference

https://pubmed.ncbi.nlm.nih.gov/19940162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Selenoprotein biosynthesis: purification and assay of components involved in selenocysteine biosynthesis and insertion in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/19940162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of the chemical properties of selenocysteine and selenocystine with their sulfur analogs

1 reference

https://pubmed.ncbi.nlm.nih.gov/19940162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

53 Replacement of odd bases in tRNA by fluorescent dyes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19940162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kinetics of interaction of nucleotides with nucleotide-free H-ras p21

1 reference

https://pubmed.ncbi.nlm.nih.gov/19940162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural basis for mRNA recognition by elongation factor SelB

1 reference

https://pubmed.ncbi.nlm.nih.gov/19940162

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.M109.081380

1 reference

Europe PubMed Central

15 October 2017

1 reference

Europe PubMed Central

15 October 2017

1 reference

Europe PubMed Central

15 October 2017

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