Thermus thermophilus bacteriophage phiYS40 genome and proteomic characterization of virions (Q41891104)

13 October 2017

Thermus thermophilus bacteriophage phiYS40 genome and proteomic characterization of virions (English)

1 reference

13 October 2017

1 reference

1 reference

Thermus thermophilus

1 reference

3

1 reference

13 October 2017

10

1 reference

13 October 2017

Sergei A Kozyavkin

9

0 references

Arcady Mushegian

object named as

Arcady Mushegian

11

0 references

Selene K Swanson

4

object named as

Selene K Swanson

1 reference

13 October 2017

12

Konstantin Severinov

1 reference

13 October 2017

8

Leonid Minakhin

1 reference

13 October 2017

Tatyana Naryshkina

1

1 reference

13 October 2017

Jing Liu

2

1 reference

13 October 2017

Andrey R Pavlov

5

1 reference

13 October 2017

Nadejda V Pavlova

6

1 reference

13 October 2017

Ross Inman

7

1 reference

13 October 2017

language of work or name

English

0 references

publication date

6 September 2006

1 reference

Journal of Molecular Biology

13 October 2017

1 reference

13 October 2017

364

1 reference

13 October 2017

4

1 reference

13 October 2017

667-677

1 reference

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

13 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Cluster analysis of mass spectrometry data reveals a novel component of SAGA

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

A model for random sampling and estimation of relative protein abundance in shotgun proteomics

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Comparative genomic analysis of hyperthermophilic archaeal Fuselloviridae viruses

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

A mammalian mediator subunit that shares properties with Saccharomyces cerevisiae mediator subunit Cse2

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Bacteriophage-Induced Modifications of Host RNA Polymerase

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Complete genome sequence of the broad-host-range vibriophage KVP40: comparative genomics of a T4-related bacteriophage

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Gene duplication with displacement and rearrangement: origin of the bacterial replication protein PriB from the single-stranded DNA-binding protein Ssb.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Potential genomic determinants of hyperthermophily

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

5 June 2018

Bacteriophage T4 Genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Helix-hairpin-helix motifs confer salt resistance and processivity on chimeric DNA polymerases

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

The genome of bacteriophage phiKZ of Pseudomonas aeruginosa

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Large-scale analysis of the yeast proteome by multidimensional protein identification technology

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

A novel lipothrixvirus, SIFV, of the extremely thermophilic crenarchaeon Sulfolobus

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Heuristic approach to deriving models for gene finding

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

SEALS: a system for easy analysis of lots of sequences.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Location of the serine residue involved in the linkage between the terminal protein and the DNA of phage phi 29.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Site-directed mutagenesis in the DNA linking site of bacteriophage phi 29 terminal protein: isolation and characterization of a Ser232----Thr mutant

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

A novel lysine-substituted nucleoside in the first position of the anticodon of minor isoleucine tRNA from Escherichia coli.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Codon and amino-acid specificities of a transfer RNA are both converted by a single post-transcriptional modification

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Complete nucleotide sequence of the virus SSV1 of the archaebacterium Sulfolobus shibatae

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Isolation and characterization of a bacteriophage infectious to an extreme thermophile, Thermus thermophilus HB8

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Tests for gene clustering.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Characterization of a B. subtilis minor isoleucine tRNA deduced from tDNA having a methionine anticodon CAT.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Molecular recognition of the identity-determinant set of isoleucine transfer RNA from Escherichia coli.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

Functional domain for priming activity in the phage phi 29 terminal protein

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1773054

The role played by viruses in the evolution of their hosts: a view based on informational protein phylogenies

18 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17027029

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

High-throughput production of optimized primers (fimers) for whole-genome direct sequencing

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17027029

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.JMB.2006.08.087

1 reference

13 October 2017

1 reference

13 October 2017

1 reference