Sex Chromosome Evolution, Heterochiasmy, and Physiological QTL in the Salmonid Brook Charr Salvelinus fontinalis. (Q41381084)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28626004%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

title

Sex Chromosome Evolution, Heterochiasmy, and Physiological QTL in the Salmonid Brook Charr Salvelinus fontinalis (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28626004%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Salvelinus fontinalis

1 reference

1

1 reference

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23 March 2020

Ciro Rico

series ordinal

2

1 reference

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23 March 2020

4

Louis Bernatchez

1 reference

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23 March 2020

author name string

Céline Audet

series ordinal

3

1 reference

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23 March 2020

publication date

7 August 2017

1 reference

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23 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28626004%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

volume

7

1 reference

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23 March 2020

issue

8

1 reference

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23 March 2020

page(s)

2749-2762

1 reference

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Salmonid Chromosome Evolution as Revealed by a Novel Method for Comparing RADseq Linkage Maps

23 March 2020

cites work

1 reference

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A SNP Based Linkage Map of the Arctic Charr (Salvelinus alpinus) Genome Provides Insights into the Diploidization Process After Whole Genome Duplication

1 October 2017

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1 October 2017

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Little evidence for enhanced phenotypic evolution in early teleosts relative to their living fossil sister group

1 October 2017

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Evolutionary mysteries in meiosis

1 October 2017

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Sequential Turnovers of Sex Chromosomes in African Clawed Frogs (Xenopus) Suggest Some Genomic Regions are Good at Sex Determination

1 October 2017

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The Evolution of Genome Structure by Natural and Sexual Selection

1 October 2017

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QTL variations for growth-related traits in eight distinct families of common carp (Cyprinus carpio).

1 October 2017

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The Atlantic salmon genome provides insights into rediploidization

1 October 2017

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Conserved Genetic Architecture Underlying Individual Recombination Rate Variation in a Wild Population of Soay Sheep (Ovis aries)

1 October 2017

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Sorting duplicated loci disentangles complexities of polyploid genomes masked by genotyping by sequencing.

1 October 2017

1 reference

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Harnessing the power of RADseq for ecological and evolutionary genomics

1 October 2017

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Identification of Multiple QTL Hotspots in Sockeye Salmon (Oncorhynchus nerka) Using Genotyping-by-Sequencing and a Dense Linkage Map.

1 October 2017

1 reference

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Replicated analysis of the genetic architecture of quantitative traits in two wild great tit populations

1 October 2017

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Sex-dependent dominance at a single locus maintains variation in age at maturity in salmon

1 October 2017

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Turnover of Sex Chromosomes in Celebensis Group Medaka Fishes.

1 October 2017

1 reference

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An integrated linkage map reveals candidate genes underlying adaptive variation in Chinook salmon (Oncorhynchus tshawytscha).

1 October 2017

1 reference

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Genomic Instability of the Sex-Determining Locus in Atlantic Salmon (Salmo salar).

1 October 2017

1 reference

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Detection and Validation of QTL Affecting Bacterial Cold Water Disease Resistance in Rainbow Trout Using Restriction-Site Associated DNA Sequencing

1 October 2017

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Coexistence of Y, W, and Z sex chromosomes in Xenopus tropicalis.

1 October 2017

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Comparative Analysis of the Shared Sex-Determination Region (SDR) among Salmonid Fishes.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Turnover of sex chromosomes and speciation in fishes

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

RAD-QTL Mapping Reveals Both Genome-Level Parallelism and Different Genetic Architecture Underlying the Evolution of Body Shape in Lake Whitefish (Coregonus clupeaformis) Species Pairs

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Y fuse? Sex chromosome fusions in fishes and reptiles

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

The genetic architecture of growth and fillet traits in farmed Atlantic salmon (Salmo salar).

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Effects of crossovers between homeologs on inheritance and population genomics in polyploid-derived salmonid fishes

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Genetics and genomics of disease resistance in salmonid species

1 October 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

The genome and linkage map of the northern pike (Esox lucius): conserved synteny revealed between the salmonid sister group and the Neoteleostei

1 October 2017

1 reference

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Comparative mapping between Coho Salmon (Oncorhynchus kisutch) and three other salmonids suggests a role for chromosomal rearrangements in the retention of duplicated regions following a whole genome duplication event.

1 October 2017

1 reference

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Sex chromosome turnover contributes to genomic divergence between incipient stickleback species.

1 October 2017

1 reference

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A dense linkage map for Chinook salmon (Oncorhynchus tshawytscha) reveals variable chromosomal divergence after an ancestral whole genome duplication event.

1 October 2017

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Comparative genome mapping between Chinook salmon (Oncorhynchus tshawytscha) and rainbow trout (O. mykiss) based on homologous microsatellite loci

1 October 2017

1 reference

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Evidence for multiple sex-determining loci in Tasmanian Atlantic salmon (Salmo salar)

1 October 2017

1 reference

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The sexually dimorphic on the Y-chromosome gene (sdY) is a conserved male-specific Y-chromosome sequence in many salmonids.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Strain specific genotype-environment interactions and evolutionary potential for body mass in brook charr (Salvelinus fontinalis).

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Chapter 11: Genome-wide association studies

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Mapping phenotypic, expression and transmission ratio distortion QTL using RAD markers in the Lake Whitefish (Coregonus clupeaformis).

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

QTL affecting stress response to crowding in a rainbow trout broodstock population.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Framing the Salmonidae family phylogenetic portrait: a more complete picture from increased taxon sampling

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Genetic architecture of migration-related traits in rainbow and steelhead trout, Oncorhynchus mykiss

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Coding Gene SNP Mapping Reveals QTL Linked to Growth and Stress Response in Brook Charr (Salvelinus fontinalis).

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Coding Gene Single Nucleotide Polymorphism Mapping and Quantitative Trait Loci Detection for Physiological Reproductive Traits in Brook Charr, Salvelinus fontinalis

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Stacks: building and genotyping Loci de novo from short-read sequences

1 October 2017

1 reference

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The QTN program and the alleles that matter for evolution: all that's gold does not glitter

1 October 2017

1 reference

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A dense SNP-based linkage map for Atlantic salmon (Salmo salar) reveals extended chromosome homeologies and striking differences in sex-specific recombination patterns

1 October 2017

1 reference

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Scrambling eggs: meiotic drive and the evolution of female recombination rates

1 October 2017

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Ever-young sex chromosomes in European tree frogs

1 October 2017

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Sequencing the genome of the Atlantic salmon (Salmo salar).

1 October 2017

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Are homologies in vertebrate sex determination due to shared ancestry or to limited options?

1 October 2017

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A role for a neo-sex chromosome in stickleback speciation

1 October 2017

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Sex reversal: a fountain of youth for sex chromosomes?

1 October 2017

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Assignment of Atlantic salmon (Salmo salar) linkage groups to specific chromosomes: conservation of large syntenic blocks corresponding to whole chromosome arms in rainbow trout (Oncorhynchus mykiss)

1 October 2017

1 reference

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The sex determining loci and sex chromosomes in the family salmonidae

1 October 2017

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Evolutionary diversity and turn-over of sex determination in teleost fishes.

1 October 2017

1 reference

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The genetics of quantitative traits: challenges and prospects

1 October 2017

1 reference

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Turnover of sex chromosomes in the stickleback fishes (gasterosteidae).

1 October 2017

1 reference

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A second generation genetic map for rainbow trout (Oncorhynchus mykiss).

1 October 2017

1 reference

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Y-specific sequences and polymorphisms in rainbow trout and Chinook salmon

1 October 2017

1 reference

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The evolutionary consequences of polyploidy

1 October 2017

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A dynamic view of sex chromosome evolution

1 October 2017

1 reference

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Assignment of rainbow trout linkage groups to specific chromosomes

1 October 2017

1 reference

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Genomic organization of the sex-determining and adjacent regions of the sex chromosomes of medaka

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Identification of the sex-determining locus of Atlantic salmon (Salmo salar) on chromosome 2.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Steps in the evolution of heteromorphic sex chromosomes

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Recombination difference between sexes: a role for haploid selection

1 October 2017

1 reference

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Sex chromosomes: evolution of the weird and wonderful

1 October 2017

1 reference

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Quantitative trait locus mapping in natural populations: progress, caveats and future directions.

1 October 2017

1 reference

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In the platypus a meiotic chain of ten sex chromosomes shares genes with the bird Z and mammal X chromosomes

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Theoretical basis of the Beavis effect.

1 October 2017

1 reference

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R/qtl: QTL mapping in experimental crosses

1 October 2017

1 reference

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The evolution of sex dimorphism in recombination

1 October 2017

1 reference

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Genome duplication, a trait shared by 22000 species of ray-finned fish

1 October 2017

1 reference

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Comparative genome analysis of the primary sex-determining locus in salmonid fishes

1 October 2017

1 reference

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Effects of genotyping errors, missing values and segregation distortion in molecular marker data on the construction of linkage maps

1 October 2017

1 reference

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Origin and evolution of the Drosophila Y chromosome

1 October 2017

1 reference

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Simultaneous maximum likelihood estimation of linkage and linkage phases in outcrossing species

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Sex-specific recombination rates in zebrafish (Danio rerio)

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

The genetic architecture of quantitative traits

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Chromosome evolution in the Salmonidae (Pisces): an update

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

The human Y chromosome, in the light of evolution

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

High incidence of a male-specific genetic marker in phenotypic female chinook salmon from the Columbia River

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

A microsatellite linkage map of rainbow trout (Oncorhynchus mykiss) characterized by large sex-specific differences in recombination rates

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Comprehensive human genetic maps: individual and sex-specific variation in recombination

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Multiple trait analysis of genetic mapping for quantitative trait loci

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Linkage modifications and sex difference in recombination

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Heteromorphic sex chromosomes in male rainbow trout.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Identification and Characterization of Sex-Associated Loci in Sockeye Salmon Using Genotyping-by-Sequencing and Comparison with a Sex-Determining Assay Based on the sdY Gene

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Meiotic Models to Explain Classical Linkage, Pseudolinkage, and Chromosomal Pairing in Tetraploid Derivative Salmonid Genomes: II. Wright is Still Right

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Whole-genome sequence of a flatfish provides insights into ZW sex chromosome evolution and adaptation to a benthic lifestyle

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Evolution of the sex chromosomes in salmonid fishes

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Homologous sex chromosomes in three deeply divergent anuran species

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

From beavis to beak color: a simulation study to examine how much qtl mapping can reveal about the genetic architecture of quantitative traits

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Genetically based population divergence in overwintering energy mobilization in brook charr (Salvelinus fontinalis).

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Low rates of X-Y recombination, not turnovers, account for homomorphic sex chromosomes in several diploid species of Palearctic green toads (Bufo viridis subgroup).

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

The sockeye salmon neo-Y chromosome is a fusion between linkage groups orthologous to the coho Y chromosome and the long arm of rainbow trout chromosome 2.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Quantitative genetic analysis of the physiological stress response in three strains of brook charr Salvelinus fontinalis and their hybrids

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Sex chromosome polymorphisms in Arctic charr and their evolutionary origins

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Extreme heterochiasmy and nascent sex chromosomes in European tree frogs.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Turnover of sex chromosomes induced by sexual conflict

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

The genetic architecture of ecological speciation and the association with signatures of selection in natural lake whitefish (Coregonus sp. Salmonidae) species pairs.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Identification of the sex chromosome pair in coho salmon (Oncorhynchus kisutch): lack of conservation of the sex linkage group with chinook salmon (Oncorhynchus tshawytscha).

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

A linkage map of Atlantic salmon (Salmo salar) reveals an uncommonly large difference in recombination rate between the sexes.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Enigma of Y chromosome degeneration: neo-Y and neo-X chromosomes of Drosophila miranda a model for sex chromosome evolution.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Extensive direct-tandem organization of a long repeat DNA sequence on the Y chromosome of chinook salmon (Oncorhynchus tshawytscha).

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Robustness of linkage maps in natural populations: a simulation study

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5555479

Identification of sex chromosomes in lake trout (Salvelinus namaycush)

4 November 2018

1 reference

12 December 2020

Genetic mapping of horizontal stripes in Lake Victoria cichlid fishes: benefits and pitfalls of using RAD markers for dense linkage mapping

1 reference

12 December 2020

The evolution of sex chromosomes

1 reference

12 December 2020

Differences in recombination frequencies during female and male meioses of the sex chromosomes of the medaka, Oryzias latipes

1 reference

12 December 2020

Sex differences in fitness and selection for centric fusions between sex-chromosomes and autosomes

1 reference

12 December 2020

Identifiers

DOI

10.1534/G3.117.040915

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28626004%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28626004%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

PubMed publication ID

28626004

1 reference