Genome duplication, a trait shared by 22000 species of ray-finned fish (Q24561882)

2

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Axel Meyer

object named as

Axel Meyer

4

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Tancred Frickey

3

object named as

Tancred Frickey

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author name string

John S Taylor

Genome duplication events and functional reduction of ploidy levels in sturgeon (Acipenser, Huso and Scaphirhynchus)

1

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language of work or name

English

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publication date

March 2003

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published in

Genome Research

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volume

13

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page(s)

382-90

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issue

3

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cites work

1 reference

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Generation and analysis of 25 Mb of genomic DNA from the pufferfish Fugu rubripes by sequence scanning

24 March 2017

1 reference

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Preservation of duplicate genes by complementary, degenerative mutations

24 March 2017

1 reference

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

24 March 2017

1 reference

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The neighbor-joining method: a new method for reconstructing phylogenetic trees

24 March 2017

1 reference

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Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes

24 March 2017

1 reference

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A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

24 March 2017

1 reference

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Basic local alignment search tool

24 March 2017

1 reference

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The evolutionary fate and consequences of duplicate genes

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Yesterday's polyploids and the mystery of diploidization

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

The evolution of trichromatic color vision by opsin gene duplication in New World and Old World primates

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Pattern and timing of gene duplication in animal genomes

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Rate of gene silencing at duplicate loci: a theoretical study and interpretation of data from tetraploid fishes

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Molecular evidence for an ancient duplication of the entire yeast genome

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Zebrafish hox clusters and vertebrate genome evolution

7 April 2017

1 reference

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TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Dealing with saturation at the amino acid level: a case study based on anciently duplicated zebrafish genes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Evolutionary conservation of zebrafish linkage group 14 with frequently deleted regions of human chromosome 5 in myeloid malignancies

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Segmental duplications and the evolution of the primate genome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Medaka--a model organism from the far East

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Comparative genomics provides evidence for an ancient genome duplication event in fish

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Genome duplication, divergent resolution and speciation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Lineage-specific gene expansions in bacterial and archaeal genomes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Genetic architecture of thermal adaptation in Escherichia coli

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

A comparative map of the zebrafish genome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Zebrafish comparative genomics and the origins of vertebrate chromosomes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

The syntenic relationship of the zebrafish and human genomes.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Gene and genome duplications in vertebrates: the one-to-four (-to-eight in fish) rule and the evolution of novel gene functions

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Characterization of whole genome radiation hybrid mapping resources for non-mammalian vertebrates

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Non-repetitive DNA sequence divergence in phylogenetically diploid and tetraploid teleostean species of the family cyprinidae and the order isospondyli

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Gene duplication in tetraploid fish: model for gene silencing at unlinked duplicated loci

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Lactate dehydrogenase (LDH) gene duplication during chordate evolution: the cDNA sequence of the LDH of the tunicate Styela plicata.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Loss of duplicate gene expression after polyploidisation

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Testing the parsimony test of genome duplications: a counterexample.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Revisiting recent challenges to the ancient fish-specific genome duplication hypothesis

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Conserved synteny between the Fugu and human PTEN locus and the evolutionary conservation of vertebrate PTEN function

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

The origins of genomic duplications in Arabidopsis.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Evolutionary patterns of gene families generated in the early stage of vertebrates

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

Zebrafish hox genes: genomic organization and modified colinear expression patterns in the trunk.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430266

A genetic linkage map for zebrafish: comparative analysis and localization of genes and expressed sequences

28 November 2018

1 reference

12 December 2020

Evolution of an antifreeze glycoprotein

1 reference

12 December 2020

An ancestral whole-genome duplication may not have been responsible for the abundance of duplicated fish genes.

1 reference

12 December 2020

Possible significances of duplication in evolution

1 reference

12 December 2020

The Origin of Interspecific Genomic Incompatibility via Gene Duplication

1 reference

12 December 2020

Tetraploid origin of the karyotype of catostomid fishes

1 reference

12 December 2020

Protein polymorphism and the rate of loss of duplicate gene expression

1 reference

12 December 2020

Vertebrate evolution by interspecific hybridisation--are we polyploid?

1 reference

12 December 2020

Identifiers

DOI

10.1101/GR.640303

1 reference

1043577

1043577

1 reference

1 reference

1 reference