Active transposable elements recover species boundaries and geographic structure in Madagascan coffee species (Q41374342)

30 September 2017

Active transposable elements recover species boundaries and geographic structure in Madagascan coffee species (English)

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30 September 2017

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Michael D Nowak

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author name string

Julissa Roncal

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Romain Guyot

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30 September 2017

Perla Hamon

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Dominique Crouzillat

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30 September 2017

Michel Rigoreau

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30 September 2017

Olivier N'Guessan Konan

6

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30 September 2017

Jean-Jacques Rakotomalala

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30 September 2017

Aaron P Davis

9

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30 September 2017

Alexandre de Kochko

10

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30 September 2017

1 August 2015

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Molecular Genetics and Genomics

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30 September 2017

291

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155-168

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1

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https://scigraph.springernature.com/pub.10.1007/s00438-015-1098-3

30 September 2017

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cites work

Alu repeats and human genomic diversity

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

The biogeographic and tectonic history of India

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Stress and transposable elements: co-evolution or useful parasites?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

The impact of transposable elements in environmental adaptation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

An annotated taxonomic conspectus of the genus Coffea (Rubiaceae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

The coffee genome provides insight into the convergent evolution of caffeine biosynthesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

BAC-end sequences analysis provides first insights into coffee (Coffea canephora P.) genome composition and evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Genomic repeat abundances contain phylogenetic signal.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Plant transposable elements: where genetics meets genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Two novel Ty1-copia retrotransposons isolated from coffee trees can effectively reveal evolutionary relationships in the Coffea genus (Rubiaceae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Repbase Update, a database of eukaryotic repetitive elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Towards a Phylogeny for Coffea (Rubiaceae): identifying well-supported lineages based on nuclear and plastid DNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

genalex 6: genetic analysis in Excel. Population genetic software for teaching and research

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Genetic structure and diversity of coffee (Coffea) across Africa and the Indian Ocean islands revealed using microsatellites

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

EMBOSS: the European Molecular Biology Open Software Suite

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Artemis: sequence visualization and annotation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Quality control and preprocessing of metagenomic datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Genetic diversity of cultivated flax (Linum usitatissimum L.) germplasm assessed by retrotransposon-based markers.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Primer3--new capabilities and interfaces

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Madagascar as a model region of species diversification

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

LTR retrotransposons and flowering plant genome size: emergence of the increase/decrease model

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Genetic variability in sunflower (Helianthus annuus L.) and in the Helianthus genus as assessed by retrotransposon-based molecular markers.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

A unified classification system for eukaryotic transposable elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Has Vicariance or Dispersal Been the Predominant Biogeographic Force in Madagascar? Only Time Will Tell

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Genetic diversity and phylogenetic relationship as revealed by inter simple sequence repeat (ISSR) polymorphism in the genus Oryza

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-015-1098-3

Comparative analysis of genetic diversity in the mangrove species Avicennia marina (Forsk.) Vierh. (Avicenniaceae) detected by AFLPs and SSRs

21 January 2018

1 reference

12 December 2020

GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update

1 reference

12 December 2020

Molecular markers based on LTR retrotransposons BARE-1 and Jeli uncover different strata of evolutionary relationships in diploid wheats

1 reference

12 December 2020

The application of LTR retrotransposons as molecular markers in plants

1 reference

12 December 2020

IRAP and REMAP for retrotransposon-based genotyping and fingerprinting

1 reference

12 December 2020

The genetic diversity and evolution of field pea (Pisum) studied by high throughput retrotransposon based insertion polymorphism (RBIP) marker analysis

1 reference

12 December 2020

Discovery and assembly of repeat family pseudomolecules from sparse genomic sequence data using the Assisted Automated Assembler of Repeat Families (AAARF) algorithm

1 reference

12 December 2020

10.1007/S00438-015-1098-3

Identifiers

DOI

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30 September 2017

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