Lamina-Associated Domains: Links with Chromosome Architecture, Heterochromatin, and Gene Repression (Q39318399)

14 June 2018

review article

1 reference

title

Lamina-Associated Domains: Links with Chromosome Architecture, Heterochromatin, and Gene Repression (English)

1 reference

14 June 2018

1

Bas van Steensel

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author name string

Andrew S Belmont

series ordinal

2

1 reference

14 June 2018

language of work or name

English

0 references

publication date

1 May 2017

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14 June 2018

published in

Cell

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14 June 2018

volume

169

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14 June 2018

page(s)

780-791

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14 June 2018

issue

5

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14 June 2018

3D structures of individual mammalian genomes studied by single-cell Hi-C.

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A-type lamins bind both hetero- and euchromatin, the latter being regulated by lamina-associated polypeptide 2 alpha

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Perinuclear Anchoring of H3K9-Methylated Chromatin Stabilizes Induced Cell Fate in C. elegans Embryos.

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15 June 2018

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Identification of lamin B-regulated chromatin regions based on chromatin landscapes

15 June 2018

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Characterization and dynamics of pericentromere-associated domains in mice

15 June 2018

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Nuclear lamins are not required for lamina-associated domain organization in mouse embryonic stem cells

15 June 2018

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Lamins: nuclear intermediate filament proteins with fundamental functions in nuclear mechanics and genome regulation

15 June 2018

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Nuclear pore proteins and the control of genome functions

15 June 2018

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Lamins at the crossroads of mechanosignaling

15 June 2018

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Distinct features of lamin A-interacting chromatin domains mapped by ChIP-sequencing from sonicated or micrococcal nuclease-digested chromatin

15 June 2018

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Directed targeting of chromatin to the nuclear lamina is mediated by chromatin state and A-type lamins.

15 June 2018

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Functional redundancy in the nuclear compartmentalization of the late-replicating genome

15 June 2018

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Topologically associating domains are stable units of replication-timing regulation

15 June 2018

1 reference

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Nuclear position dictates DNA repair pathway choice

15 June 2018

1 reference

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NET gains and losses: the role of changing nuclear envelope proteomes in genome regulation.

15 June 2018

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HSP70 transgene directed motion to nuclear speckles facilitates heat shock activation

15 June 2018

1 reference

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Stochastic genome-nuclear lamina interactions: modulating roles of Lamin A and BAF.

15 June 2018

1 reference

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Genome-wide analysis links emerin to neuromuscular junction activity in Caenorhabditis elegans.

15 June 2018

1 reference

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Lamina-associated polypeptide (LAP)2α and nucleoplasmic lamins in adult stem cell regulation and disease

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

The human protein PRR14 tethers heterochromatin to the nuclear lamina during interphase and mitotic exit.

15 June 2018

1 reference

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The pluripotent genome in three dimensions is shaped around pluripotency factors

15 June 2018

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The nuclear envelope LEM-domain protein emerin

15 June 2018

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Lamin A/C-promoter interactions specify chromatin state-dependent transcription outcomes

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Single-cell dynamics of genome-nuclear lamina interactions

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Promoter- and RNA polymerase II-dependent hsp-16 gene association with nuclear pores in Caenorhabditis elegans

15 June 2018

1 reference

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Specific nuclear envelope transmembrane proteins can promote the location of chromosomes to and from the nuclear periphery.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Developmentally regulated subnuclear genome reorganization restricts neural progenitor competence in Drosophila.

15 June 2018

1 reference

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Nuclear aggregation of olfactory receptor genes governs their monogenic expression

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Constitutive nuclear lamina-genome interactions are highly conserved and associated with A/T-rich sequence

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

DNA sequence-dependent compartmentalization and silencing of chromatin at the nuclear lamina

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Spatial partitioning of the regulatory landscape of the X-inactivation centre

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Topological domains in mammalian genomes identified by analysis of chromatin interactions

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Regions of focal DNA hypermethylation and long-range hypomethylation in colorectal cancer coincide with nuclear lamina-associated domains

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Mouse B-type lamins are required for proper organogenesis but not by embryonic stem cells

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

CTCF-mediated functional chromatin interactome in pluripotent cells

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Biogenesis and function of nuclear bodies

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Subnuclear segregation of genes and core promoter factors in myogenesis

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Lamin B receptor: multi-tasking at the nuclear envelope

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Caenorhabditis elegans chromosome arms are anchored to the nuclear membrane via discontinuous association with LEM-2

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

The insulator protein SU(HW) fine-tunes nuclear lamina interactions of the Drosophila genome

15 June 2018

1 reference

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High-resolution whole-genome sequencing reveals that specific chromatin domains from most human chromosomes associate with nucleoli

15 June 2018

1 reference

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The role of Drosophila Lamin C in muscle function and gene expression

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Molecular maps of the reorganization of genome-nuclear lamina interactions during differentiation

15 June 2018

1 reference

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Initial genomics of the human nucleolus

15 June 2018

1 reference

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Nucleoporins directly stimulate expression of developmental and cell-cycle genes inside the nucleoplasm

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

G9a selectively represses a class of late-replicating genes at the nuclear periphery.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

15 June 2018

1 reference

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Nuclear architecture of rod photoreceptor cells adapts to vision in mammalian evolution.

15 June 2018

1 reference

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The B-type lamin is required for somatic repression of testis-specific gene clusters

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Large histone H3 lysine 9 dimethylated chromatin blocks distinguish differentiated from embryonic stem cells

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Recruitment to the nuclear periphery can alter expression of genes in human cells

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

High-resolution profiling of histone methylations in the human genome

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C).

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Mutant nuclear lamin A leads to progressive alterations of epigenetic control in premature aging

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Long-range directional movement of an interphase chromosome site

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Nuclear membrane proteins with potential disease links found by subtractive proteomics

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Nucleoporin-mediated regulation of cell identity genes.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

CTCF and Cohesin in Genome Folding and Transcriptional Gene Regulation

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Accessorizing and anchoring the LINC complex for multifunctionality

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Chromatin decondensation is sufficient to alter nuclear organization in embryonic stem cells.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Age-associated loss of lamin-B leads to systemic inflammation and gut hyperplasia

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

β-Globin cis-elements determine differential nuclear targeting through epigenetic modifications.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

The nuclear envelope protein emerin binds directly to histone deacetylase 3 (HDAC3) and activates HDAC3 activity

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Transcription factories: genetic programming in three dimensions

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

A genetic locus targeted to the nuclear periphery in living cells maintains its transcriptional competence

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Moving chromatin within the interphase nucleus-controlled transitions?

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Mechanical regulation of transcription controls Polycomb-mediated gene silencing during lineage commitment.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

PARP1- and CTCF-Mediated Interactions between Active and Repressed Chromatin at the Lamina Promote Oscillating Transcription.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

The visualization of large organized chromatin domains enriched in the H3K9me2 mark within a single chromosome in a single cell

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Chromatin position effects assayed by thousands of reporters integrated in parallel.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

LBR and lamin A/C sequentially tether peripheral heterochromatin and inversely regulate differentiation.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Step-wise methylation of histone H3K9 positions heterochromatin at the nuclear periphery.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

An EDMD mutation in C. elegans lamin blocks muscle-specific gene relocation and compromises muscle integrity.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Characterization of genome-nucleoporin interactions in Drosophila links chromatin insulators to the nuclear pore complex

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Transcriptional repression mediated by repositioning of genes to the nuclear lamina

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Characterization of the Drosophila melanogaster genome at the nuclear lamina.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Alterations of nuclear envelope and chromatin organization in mandibuloacral dysplasia, a rare form of laminopathy

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

Differences in centromere positioning of cycling and postmitotic human cell types

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5532494

On the occurrence of a fibrous lamina on the inner aspect of the nuclear envelope in certain cells of vertebrates

21 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28525751

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CELL.2017.04.022

1 reference

14 June 2018

PMCID

5532494

1 reference

14 June 2018

PubMed ID

28525751

1 reference

14 June 2018