Draft genome of the lined seahorse, Hippocampus erectus (Q38819258)

6 September 2017

Draft genome of the lined seahorse, Hippocampus erectus (English)

1 reference

6 September 2017

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1 reference

Geng Qin

8

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Byrappa Venkatesh

object named as

Byrappa Venkatesh

16

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author name string

Qiang Lin

1

1 reference

6 September 2017

Ying Qiu

2

1 reference

6 September 2017

Ruobo Gu

3

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6 September 2017

Meng Xu

4

1 reference

6 September 2017

Jia Li

5

1 reference

6 September 2017

Chao Bian

6

1 reference

6 September 2017

Huixian Zhang

7

1 reference

6 September 2017

Yanhong Zhang

9

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6 September 2017

Wei Luo

10

1 reference

6 September 2017

Jieming Chen

11

1 reference

6 September 2017

Xinxin You

12

1 reference

6 September 2017

Mingjun Fan

13

1 reference

6 September 2017

Min Sun

14

1 reference

6 September 2017

Pao Xu

15

1 reference

6 September 2017

Junming Xu

17

1 reference

6 September 2017

Hongtuo Fu

18

1 reference

6 September 2017

Qiong Shi

19

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6 September 2017

22 April 2017

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6 September 2017

6

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based on heuristic

inferred from page(s)

published in

GigaScience

1 reference

6 September 2017

6

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6 September 2017

6

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6 September 2017

1-6

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Creative Commons Attribution 4.0 International

6 September 2017

start time

22 April 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

The genome of the Gulf pipefish enables understanding of evolutionary innovations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

The seahorse genome and the evolution of its specialized morphology.

9 September 2017

1 reference

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Species Conservation Profiles compliant with the IUCN Red List of Threatened Species

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

De Novo Transcriptome Analysis of Two Seahorse Species (Hippocampus erectus and H. mohnikei) and the Development of Molecular Markers for Population Genetics

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

Pfam: the protein families database

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

Using the Basic Local Alignment Search Tool (BLAST)

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

SOAP2: an improved ultrafast tool for short read alignment

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

TopHat: discovering splice junctions with RNA-Seq

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

Using RepeatMasker to identify repetitive elements in genomic sequences

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

InterPro: the integrative protein signature database

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

Male pregnancy in seahorses and pipefish: beyond the mammalian model

9 September 2017

1 reference

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Gene cooption without duplication during the evolution of a male-pregnancy gene in pipefish.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

AUGUSTUS: ab initio prediction of alternative transcripts

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

Repbase Update, a database of eukaryotic repetitive elements

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

The ProDom database of protein domain families: more emphasis on 3D

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

9 September 2017

GeneWise and Genomewise

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

MUSCLE: multiple sequence alignment with high accuracy and high throughput

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

SMART 4.0: towards genomic data integration

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

PANTHER: a browsable database of gene products organized by biological function, using curated protein family and subfamily classification

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

BLAT—The BLAST-Like Alignment Tool

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

Male pregnancy in seahorses and pipefishes (family Syngnathidae): rapid diversification of paternal brood pouch morphology inferred from a molecular phylogeny

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

Gene ontology: tool for the unification of biology

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

KEGG: kyoto encyclopedia of genes and genomes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

Observation of Top Quark Production in p-barp Collisions with the Collider Detector at Fermilab

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

Tandem repeats finder: a program to analyze DNA sequences

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

Prediction of complete gene structures in human genomic DNA

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

A novel pathogenic bacteria (Vibrio fortis) causing enteritis in cultured seahorses, Hippocampus erectus Perry, 1810.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

Creating a honey bee consensus gene set

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

TEclass--a tool for automated classification of unknown eukaryotic transposable elements.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5459928

The PRINTS database: A resource for identification of protein families

31 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FGIGASCIENCE%2FGIX030

10.1093/GIGASCIENCE/GIX030

21 January 2018

Identifiers

DOI

1 reference

6 September 2017

1 reference

6 September 2017

1 reference