Large-scale collection and annotation of full-length enriched cDNAs from a model halophyte, Thellungiella halophila (Q38511773)

3 September 2017

Large-scale collection and annotation of full-length enriched cDNAs from a model halophyte, Thellungiella halophila (English)

1 reference

3 September 2017

1 reference

Thellungiella halophila

Thellungiella halophila

1 reference

Tetsuya Sakurai

2

0 references

Keiichi Mochida

Keiichi Mochida

3

0 references

Motoaki Seki

Motoaki Seki

9

0 references

Kazuo Shinozaki

Kazuo Shinozaki

13

0 references

Yasushi Totoki

6

Yasushi Totoki

1 reference

3 September 2017

4

Atsushi Ishiwata

1 reference

3 September 2017

5

Atsushi Kurotani

1 reference

3 September 2017

1

Teruaki Taji

1 reference

3 September 2017

11

Yoichi Sakata

1 reference

3 September 2017

Atsushi Toyoda

7

1 reference

3 September 2017

Yoshiyuki Sakaki

8

1 reference

3 September 2017

Hirokazu Ono

10

1 reference

3 September 2017

Shigeo Tanaka

12

1 reference

3 September 2017

12 November 2008

1 reference

3 September 2017

1 reference

3 September 2017

8

1 reference

3 September 2017

115

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2229-8-115

3 September 2017

0 references

cites work

Functional annotation of 19,841 Populus nigra full-length enriched cDNA clones

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SOS2 promotes salt tolerance in part by interacting with the vacuolar H+-ATPase and upregulating its transport activity

6 September 2017

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The FOX hunting system: an alternative gain-of-function gene hunting technique

6 September 2017

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New developments in the InterPro database

6 September 2017

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Evidence that differential gene expression between the halophyte, Thellungiella halophila, and Arabidopsis thaliana is responsible for higher levels of the compatible osmolyte proline and tight control of Na+ uptake in T. halophila.

6 September 2017

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Tonoplast-located GmCLC1 and GmNHX1 from soybean enhance NaCl tolerance in transgenic bright yellow (BY)-2 cells

6 September 2017

1 reference

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Annotation and expression profile analysis of 2073 full-length cDNAs from stress-induced maize (Zea mays L.) seedlings

6 September 2017

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Transcriptional profiling implicates novel interactions between abiotic stress and hormonal responses in Thellungiella, a close relative of Arabidopsis

6 September 2017

1 reference

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Salinity stress adaptation competence in the extremophile Thellungiella halophila in comparison with its relative Arabidopsis thaliana.

6 September 2017

1 reference

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Expressed sequence tags from the Yukon ecotype of Thellungiella reveal that gene expression in response to cold, drought and salinity shows little overlap

6 September 2017

1 reference

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Structure and function of clc channels

6 September 2017

1 reference

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Characterization of full-length enriched expressed sequence tags of stress-treated poplar leaves

6 September 2017

1 reference

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RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome

6 September 2017

1 reference

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Complete sequencing and characterization of 21,243 full-length human cDNAs

6 September 2017

1 reference

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RIKEN Arabidopsis full-length (RAFL) cDNA and its applications for expression profiling under abiotic stress conditions

6 September 2017

1 reference

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Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia

6 September 2017

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Comparative genomics of Physcomitrella patens gametophytic transcriptome and Arabidopsis thaliana: implication for land plant evolution

6 September 2017

1 reference

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A Drosophila full-length cDNA resource

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

The Drosophila gene collection: identification of putative full-length cDNAs for 70% of D. melanogaster genes

6 September 2017

1 reference

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Functional annotation of a full-length Arabidopsis cDNA collection

6 September 2017

1 reference

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Learning from the Arabidopsis experience. The next gene search paradigm

6 September 2017

1 reference

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InterProScan--an integration platform for the signature-recognition methods in InterPro

6 September 2017

1 reference

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Balanced-size and long-size cloning of full-length, cap-trapped cDNAs into vectors of the novel lambda-FLC family allows enhanced gene discovery rate and functional analysis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Halotolerant cyanobacterium Aphanothece halophytica contains an Na(+)/H(+) antiporter, homologous to eukaryotic ones, with novel ion specificity affected by C-terminal tail

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Rapid amplification of plasmid and phage DNA using Phi 29 DNA polymerase and multiply-primed rolling circle amplification

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Functional annotation of a full-length mouse cDNA collection

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

6 September 2017

1 reference

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Genetic analysis of plant salt tolerance using Arabidopsis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes

6 September 2017

1 reference

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The Arabidopsis thaliana salt tolerance gene SOS1 encodes a putative Na+/H+ antiporter.

6 September 2017

1 reference

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Gene ontology: tool for the unification of biology

6 September 2017

1 reference

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A Drosophila complementary DNA resource

6 September 2017

1 reference

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CAP3: A DNA sequence assembly program

6 September 2017

1 reference

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Salt tolerance conferred by overexpression of a vacuolar Na+/H+ antiport in Arabidopsis

6 September 2017

1 reference

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High-efficiency cloning of Arabidopsis full-length cDNA by biotinylated CAP trapper

6 September 2017

1 reference

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A computer program for aligning a cDNA sequence with a genomic DNA sequence

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Base-calling of automated sequencer traces using phred. II. Error probabilities

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Thermostabilization and thermoactivation of thermolabile enzymes by trehalose and its application for the synthesis of full length cDNA.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

High efficiency selection of full-length cDNA by improved biotinylated cap trapper.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

High-efficiency full-length cDNA cloning by biotinylated CAP trapper

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Effects of chronic ozone exposure on gene expression in Arabidopsis thaliana ecotypes and in Thellungiella halophila

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Salt cress. A halophyte and cryophyte Arabidopsis relative model system and its applicability to molecular genetic analyses of growth and development of extremophiles.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Salt stress induces an increased expression of V-type H(+)-ATPase in mature sugar beet leaves.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

A family of putative chloride channels from Arabidopsis and functional complementation of a yeast strain with a CLC gene disruption.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Enhanced salt tolerance mediated by AtHKT1 transporter-induced Na unloading from xylem vessels to xylem parenchyma cells.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

The predictive power of the CluSTr database.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Comparative genomics in salt tolerance between Arabidopsis and aRabidopsis-related halophyte salt cress using Arabidopsis microarray

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Vacuolar cation/H+ exchange, ion homeostasis, and leaf development are altered in a T‐DNA insertional mutant of AtNHX1, the Arabidopsis vacuolar Na+/H+ antiporter

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Evidence for a role in growth and salt resistance of a plasma membrane H+-ATPase in the root endodermis.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2621223

Construction of a full-length cDNA library from young spikelets of hexaploid wheat and its characterization by large-scale sequencing of expressed sequence tags

31 August 2018

1 reference

12 December 2020

Overexpression of a plasma membrane Na+/H+ antiporter gene improves salt tolerance in Arabidopsis thaliana

1 reference

12 December 2020

Na+-ATPase from the plasma membrane of the marine alga Tetraselmis (Platymonas) viridis forms a phosphorylated intermediate

1 reference

12 December 2020

Salt stress in Thellungiella halophila activates Na+ transport mechanisms required for salinity tolerance

1 reference

12 December 2020

Features of Arabidopsis genes and genome discovered using full-length cDNAs

1 reference

12 December 2020

Thellungiella halophila, a salt-tolerant relative of Arabidopsis thaliana, has specific root ion-channel features supporting K+/Na+ homeostasis under salinity stress

1 reference

12 December 2020

Presence of a Na+-stimulated P-type ATPase in the plasma membrane of the alkaliphilic halotolerant cyanobacterium Aphanothece halophytica

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2229-8-115

1 reference

Dimensions Publication ID

3 September 2017

0 references

1 reference

3 September 2017

1 reference