Functional aspects of cytidine-guanosine dinucleotides and their locations in genes (Q38472616)

3 September 2017

title

Functional aspects of cytidine-guanosine dinucleotides and their locations in genes (English)

1 reference

3 September 2017

4

Klaus Klaushofer

1 reference

3 September 2017

Franz Varga

1

1 reference

3 September 2017

Heidrun Karlic

series ordinal

2

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3 September 2017

Roman Thaler

series ordinal

3

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3 September 2017

publication date

1 October 2011

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3 September 2017

published in

Biomolecular concepts

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3 September 2017

volume

2

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3 September 2017

issue

5

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3 September 2017

page(s)

391-405

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Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported

3 September 2017

copyright license

start time

1 October 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Extra-cellular matrix suppresses expression of the apoptosis mediator Fas by epigenetic DNA methylation

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Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts

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The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

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Safeguarding parental identity: Dnmt1 maintains imprints during epigenetic reprogramming in early embryogenesis

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21 January 2018

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Molecular and Enzymatic Profiles of Mammalian DNA Methyltransferases: Structures and Targets for Drugs

21 January 2018

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DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development

21 January 2018

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Stage- and cell-specific expression of Dnmt3a and Dnmt3b during embryogenesis.

21 January 2018

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DNMT3L stimulates the DNA methylation activity of Dnmt3a and Dnmt3b through a direct interaction

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.036

Dnmt3L and the establishment of maternal genomic imprints

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.036

Dynamic instability of genomic methylation patterns in pluripotent stem cells

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.036

DNMT3L modulates significant and distinct flanking sequence preference for DNA methylation by DNMT3A and DNMT3B in vivo.

21 January 2018

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Identification of preferential target sites for human DNA methyltransferases

21 January 2018

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Linking DNA methylation and histone modification: patterns and paradigms

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.036

Interpretation of Developmental Signaling at Chromatin: The Polycomb Perspective

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.036

An elaborate pathway required for Ras-mediated epigenetic silencing

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.036

Helicase homologues maintain cytosine methylation in plants and mammals.

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.036

Lsh, a member of the SNF2 family, is required for genome-wide methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Maintenance of genomic methylation requires a SWI2/SNF2-like protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Lsh, an epigenetic guardian of repetitive elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Lsh is involved in de novo methylation of DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Altered epigenetic patterning leading to replicative senescence and reduced longevity. A role of a novel SNF2 factor, PASG.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Growth retardation and premature aging phenotypes in mice with disruption of the SNF2-like gene, PASG

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Lsh participates in DNA methylation and silencing of stem cell genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Lsh mediated RNA polymerase II stalling at HoxC6 and HoxC8 involves DNA methylation

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.036

LSH and G9a/GLP complex are required for developmentally programmed DNA methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Demethylase activity is directed by histone acetylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Synergy of demethylation and histone deacetylase inhibition in the re-expression of genes silenced in cancer

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.036

Biological rationale for the use of DNA methyltransferase inhibitors as new strategy for modulation of tumor response to chemotherapy and radiation

21 January 2018

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https://api.crossref.org/works/10.1515%2FBMC.2011.036

DNA demethylation induced by the methyl-CpG-binding domain protein MBD3.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Towards a pharmacology of DNA methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Epigenetics and cancer treatment

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Induction of Tumors in Mice by Genomic Hypomethylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

DNMT1 forms a complex with Rb, E2F1 and HDAC1 and represses transcription from E2F-responsive promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

DNA methylation is a reversible biological signal

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Epigenetic tête-à-tête: the bilateral relationship between chromatin modifications and DNA methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Acetylation-induced transcription is required for active DNA demethylation in methylation-silenced genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

A mammalian protein with specific demethylase activity for mCpG DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

On the mechanism of demethylation of 5-methylcytosine in DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

A discontinuous DNA glycosylase domain in a family of enzymes that excise 5-methylcytosine

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

The thymine glycosylase MBD4 can bind to the product of deamination at methylated CpG sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Identification of RING finger protein 4 (RNF4) as a modulator of DNA demethylation through a functional genomics screen

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Enhanced CpG mutability and tumorigenesis in MBD4-deficient mice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Gadd45a promotes epigenetic gene activation by repair-mediated DNA demethylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

TAF12 recruits Gadd45a and the nucleotide excision repair complex to the promoter of rRNA genes leading to active DNA demethylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Neuronal activity-induced Gadd45b promotes epigenetic DNA demethylation and adult neurogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

GADD45A does not promote DNA demethylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Conserved DNA methylation in Gadd45a(-/-) mice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Prediction of novel families of enzymes involved in oxidative and other complex modifications of bases in nucleic acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Endogenous cytosine damage products alter the site selectivity of human DNA maintenance methyltransferase DNMT1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

PGC7/Stella protects against DNA demethylation in early embryogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

A role for the elongator complex in zygotic paternal genome demethylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

The Elongator subunit Elp3 contains a Fe4S4 cluster and binds S-adenosylmethionine

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Epigenetic reprogramming in plant and animal development

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Activation and transposition of endogenous retroviral elements in hypomethylation induced tumors in mice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Cancer DNA methylation: molecular mechanisms and clinical implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

The DNMT3B DNA methyltransferase gene is mutated in the ICF immunodeficiency syndrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Differentiation of epigenetic modifications between transposons and genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

DNA recognition by the methyl-CpG binding domain of MeCP2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Purification, sequence, and cellular localization of a novel chromosomal protein that binds to methylated DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Multiple modes of interaction between the methylated DNA binding protein MeCP2 and chromatin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Analysis of protein domains and Rett syndrome mutations indicate that multiple regions influence chromatin-binding dynamics of the chromatin-associated protein MECP2 in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

DNA CpG hypomethylation induces heterochromatin reorganization involving the histone variant macroH2A.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Methylation-induced repression--belts, braces, and chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Replication timing-related and gene body-specific methylation of active human genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Human DNA methylomes at base resolution show widespread epigenomic differences

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

CpG islands in vertebrate genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

A novel CpG island set identifies tissue-specific methylation at developmental gene loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

CpG islands--'a rough guide'.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

CpG islands: algorithms and applications in methylation studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Comprehensive analysis of CpG islands in human chromosomes 21 and 22

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Ontogeny of X-chromosome inactivation in the female germ line

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Promoter-specific hypoacetylation of X-inactivated genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Differential methylation of hypoxanthine phosphoribosyltransferase genes on active and inactive human X chromosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Gene body-specific methylation on the active X chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Genome-wide evolutionary analysis of eukaryotic DNA methylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Nucleosome deposition and DNA methylation at coding region boundaries

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Dynamic changes in the human methylome during differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

The Honey Bee Epigenomes: Differential Methylation of Brain DNA in Queens and Workers

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Imatinib mesylate (IM)-induced growth inhibition is associated with production of spliced osteocalcin-mRNA in cell lines

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

DNA methylation landscapes: provocative insights from epigenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

DNA methylation in cancer: too much, but also too little

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Targeting DNA methylation in cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

DNA methylation and expression of LINE-1 and HERV-K provirus sequences in urothelial and renal cell carcinomas

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Alu repeats and human genomic diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Comparative methylome analysis of benign and malignant peripheral nerve sheath tumors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Aberrant methylation and associated transcriptional mobilization of Alu elements contributes to genomic instability in hypoxia

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Hypomethylation and genome instability in the germline of exposed parents and their progeny is associated with altered miRNA expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Frequent DNA hypomethylation of human juxtacentromeric BAGE loci in cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Promoter hypomethylation of a novel cancer/testis antigen gene CAGE is correlated with its aberrant expression and is seen in premalignant stage of gastric carcinoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Epigenetic control of MAGE gene expression by the KIT tyrosine kinase

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Tumor suppressive effect of lysyl oxidase proenzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Lysyl oxidase (LOX) mRNA expression and genes of the differentiated osteoblastic phenotype are upregulated in human osteosarcoma cells by suramin

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

The tumor suppressor activity of the lysyl oxidase propeptide reverses the invasive phenotype of Her-2/neu-driven breast cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Repression of BCL2 by the tumor suppressor activity of the lysyl oxidase propeptide inhibits transformed phenotype of lung and pancreatic cancer cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Alteration of DNA methylation in gastrointestinal carcinogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

DNA methylation in hepatocellular carcinoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Aberrant methylation of multiple tumor suppressor genes in aging liver, chronic hepatitis, and hepatocellular carcinoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Epigenetics and aging: the targets and the marks

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Epigenetic factors in aging and longevity

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Transcriptional control of the DNA methyltransferases is altered in aging and neoplastically-transformed human fibroblasts

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Differential maintenance and de novo methylating activity by three DNA methyltransferases in aging and immortalized fibroblasts

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Specific age-associated DNA methylation changes in human dermal fibroblasts

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Human aging-associated DNA hypermethylation occurs preferentially at bivalent chromatin domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

P14 methylation in human colon cancer is associated with microsatellite instability and wild-type p53.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Multiple tumor suppressor genes are increasingly methylated with age in non-neoplastic gastric epithelia.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

DNA methylation profiling of human chromosomes 6, 20 and 22

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Correlation of COL10A1 induction during chondrogenesis of mesenchymal stem cells with demethylation of two CpG sites in the COL10A1 promoter.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

The tissue-specific methylation of the human tyrosine hydroxylase gene reveals new regulatory elements in the first exon

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Methylation status of a single CpG locus 3 bases upstream of TATA-box of receptor activator of nuclear factor-kappaB ligand (RANKL) gene promoter modulates cell- and tissue-specific RANKL expression and osteoclastogenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Hypermethylation of the gene promoter and enhancer region can regulate Fas expression and sensitivity in colon carcinoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Hypermethylation of the tumor necrosis factor receptor superfamily 6 (APT1, Fas, CD95/Apo-1) gene promoter at rel/nuclear factor kappaB sites in prostatic carcinoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Downregulation of Fas gene expression in Sézary syndrome is associated with promoter hypermethylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

MethPrimer: designing primers for methylation PCRs

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Promoter region methylation does not account for the frequent loss of expression of the Fas gene in colorectal carcinoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Active chromatin marks are retained on X chromosomes lacking gene or repeat silencing despite XIST/Xist expression in somatic cell hybrids

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Lysyl oxidase is a tumor suppressor gene inactivated by methylation and loss of heterozygosity in human gastric cancers.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

21 January 2018

Phylogeny of Methylomes

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

Mutagenic deamination of cytosine residues in DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2011.036

21 January 2018

Identifiers

DOI

10.1515/BMC.2011.036

1 reference

3 September 2017

1 reference