Towards more accurate prediction of protein folding rates: a review of the existing Web-based bioinformatics approaches. (Q38195369)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24621527%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

review article

1 reference

title

Towards more accurate prediction of protein folding rates: a review of the existing Web-based bioinformatics approaches (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24621527%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

0 references

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24621527%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Jiangning Song

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24621527%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

author name string

Catherine Ching Han Chang

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24621527%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Ramakrishnan Nagasundara Ramanan

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24621527%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

publication date

11 March 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24621527%20AND%20SRC:MED&resulttype=core&format=json

Briefings in Bioinformatics

10 March 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24621527%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

volume

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24621527%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24621527%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

page(s)

314-324

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24621527%20AND%20SRC:MED&resulttype=core&format=json

Protein folding and misfolding: a paradigm of self-assembly and regulation in complex biological systems

10 March 2020

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Unifying features in protein-folding mechanisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Kinetic model of in vivo folding and inclusion body formation in recombinant Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

A support vector machine-based method for predicting the propensity of a protein to be soluble or to form inclusion body on overexpression in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Swfoldrate: predicting protein folding rates from amino acid sequence with sliding window method.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

K-Fold: a tool for the prediction of the protein folding kinetic order and rate.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Machine learning algorithms for predicting protein folding rates and stability of mutant proteins: comparison with statistical methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Predicting protein folding rates from geometric contact and amino acid sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Bioinformatics approaches for improved recombinant protein production in Escherichia coli: protein solubility prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Prediction of protein solubility in Escherichia coli using logistic regression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Using the concept of Chou's pseudo amino acid composition to predict protein solubility: an approach with entropies in information theory

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Sequence-based prediction of protein solubility.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Understanding the relationship between the primary structure of proteins and its propensity to be soluble on overexpression in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

SOLpro: accurate sequence-based prediction of protein solubility

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

PROSO II--a new method for protein solubility prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Protein solubility: sequence based prediction and experimental verification.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Contact order, transition state placement and the refolding rates of single domain proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Comparison between long-range interactions and contact order in determining the folding rate of two-state proteins: application of long-range order to folding rate prediction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Folding rate prediction using total contact distance

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

SWISS-MODEL: An automated protein homology-modeling server

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Principles that govern the folding of protein chains

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Inherent toxicity of aggregates implies a common mechanism for protein misfolding diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

FOLD-RATE: prediction of protein folding rates from amino acid sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Cell-PLoc: a package of Web servers for predicting subcellular localization of proteins in various organisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

What is a support vector machine?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Biological applications of support vector machines

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Bioinformatic approaches for predicting substrates of proteases

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Machine learning in bioinformatics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Using cross-validation to evaluate predictive accuracy of survival risk classifiers based on high-dimensional data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

UniProt: the Universal Protein knowledgebase

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

A review of statistical methods for prediction of proteolytic cleavage

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Prediction error estimation: a comparison of resampling methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Integrated prediction of protein folding and unfolding rates from only size and structural class

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Protein Folding Database (PFD 2.0): an online environment for the International Foldeomics Consortium.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

PPT-DB: the protein property prediction and testing database.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

CD-HIT Suite: a web server for clustering and comparing biological sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

21 January 2018

The Protein Data Bank

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Better prediction of protein contact number using a support vector regression analysis of amino acid sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

KineticDB: a database of protein folding kinetics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Protein structure prediction servers at University College London

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Improving the accuracy of protein secondary structure prediction using structural alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

SCRATCH: a protein structure and structural feature prediction server

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Protein folding rates and stability: how much is there beyond size?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Effects of macromolecular crowding on protein folding and aggregation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Molecular chaperones: assisting assembly in addition to folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

Standardizing the Performance Evaluation of Short-Term Wind Power Prediction Models

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBU007

21 January 2018

Identifiers

DOI

10.1093/BIB/BBU007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24621527%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

DBLP publication ID

journals/bib/ChangTSR15

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24621527%20AND%20SRC:MED&resulttype=core&format=json