Genome-scale metabolic model in guiding metabolic engineering of microbial improvement (Q38063161)

28 August 2017

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title

Genome-scale metabolic model in guiding metabolic engineering of microbial improvement (English)

1 reference

28 August 2017

Chuan Xu

1

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28 August 2017

Lili Liu

2

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28 August 2017

Zhao Zhang

3

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28 August 2017

Danfeng Jin

4

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28 August 2017

Juanping Qiu

5

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28 August 2017

Ming Chen

6

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28 August 2017

language of work or name

English

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publication date

28 November 2012

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Applied Microbiology and Biotechnology

28 August 2017

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28 August 2017

97

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28 August 2017

2

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28 August 2017

519-539

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https://scigraph.springernature.com/pub.10.1007/s00253-012-4543-9

28 August 2017

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21 January 2018

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21 January 2018

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Metabolic engineering of Escherichia coli for the production of L-valine based on transcriptome analysis and in silico gene knockout simulation

21 January 2018

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Genome-scale model of Streptococcus thermophilus LMG18311 for metabolic comparison of lactic acid bacteria

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21 January 2018

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21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Genome-scale metabolic analysis of Clostridium thermocellum for bioethanol production

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Design and application of genome-scale reconstructed metabolic models.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

OptFlux: an open-source software platform for in silico metabolic engineering

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Comparative metabolic capabilities for Micrococcus luteus NCTC 2665, the "Fleming" strain, and actinobacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Zea mays iRS1563: a comprehensive genome-scale metabolic reconstruction of maize metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Improved triacylglycerol production in Acinetobacter baylyi ADP1 by metabolic engineering

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Optimization based automated curation of metabolic reconstructions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Metabolic reconstruction of the archaeon methanogen Methanosarcina Acetivorans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Database resources of the National Center for Biotechnology Information

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

BRENDA, the enzyme information system in 2011

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Next-generation sequencing transforms today's biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Analysis of optimality in natural and perturbed metabolic networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Genome-scale model for Clostridium acetobutylicum: Part I. Metabolic network resolution and analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Modeling hybridoma cell metabolism using a generic genome-scale metabolic model of Mus musculus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Development and experimental verification of a genome-scale metabolic model for Corynebacterium glutamicum

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Regulatory on/off minimization of metabolic flux changes after genetic perturbations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

A detailed genome-wide reconstruction of mouse metabolism based on human Recon 1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

In silico genome-scale metabolic analysis of Pseudomonas putida KT2440 for polyhydroxyalkanoate synthesis, degradation of aromatics and anaerobic survival.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Challenges in engineering microbes for biofuels production.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Genome-scale constraint-based modeling of Geobacter metallireducens

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Constraint-based modeling analysis of the metabolism of two Pelobacter species

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Analysis of growth of Lactobacillus plantarum WCFS1 on a complex medium using a genome-scale metabolic model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Systems biology of lactic acid bacteria: a critical review.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

A protocol for generating a high-quality genome-scale metabolic reconstruction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Automated metabolic reconstruction for Methanococcus jannaschii

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Toward design-based engineering of industrial microbes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Improved L-lysine production with Corynebacterium glutamicum and systemic insight into citrate synthase flux and activity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Genome-scale metabolic representation of Amycolatopsis balhimycina

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Genome-scale in silico aided metabolic analysis and flux comparisons of Escherichia coli to improve succinate production.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Genome-scale modeling and in silico analysis of ethanologenic bacteria Zymomonas mobilis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Modeling and simulation: tools for metabolic engineering

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Genome-scale metabolic network modeling results in minimal interventions that cooperatively force carbon flux towards malonyl-CoA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Biosynthesis of polylactic acid and its copolymers using evolved propionate CoA transferase and PHA synthase

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

EMILiO: a fast algorithm for genome-scale strain design.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Malic acid production by Saccharomyces cerevisiae: engineering of pyruvate carboxylation, oxaloacetate reduction, and malate export.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Understanding the industrial application potential of lactic acid bacteria through genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Size-exclusion chromatography of heparin oligosaccharides at high and low pressure

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

From zero to hero—Design-based systems metabolic engineering of Corynebacterium glutamicum for l-lysine production

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

Systems-level analysis of genome-scalein silico metabolic models using MetaFluxNet

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4543-9

10.1007/S00253-012-4543-9

21 January 2018

Identifiers

DOI

1 reference

Dimensions Publication ID

28 August 2017

0 references

1 reference