Variation in the mutation rate across mammalian genomes (Q37942062)

25 August 2017

title

Variation in the mutation rate across mammalian genomes (English)

1 reference

25 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21969038

13 December 2024

mutation rate

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21969038

13 December 2024

2

1 reference

25 August 2017

Alan Hodgkinson

1

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publication date

4 October 2011

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25 August 2017

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=21969038

http://www.nature.com/articles/nrg3098.pdf

13 December 2024

work available at URL

1 reference

https://api.crossref.org/works/10.1038/NRG3098

http://www.nature.com/articles/nrg3098

13 December 2024

1 reference

https://api.crossref.org/works/10.1038/NRG3098

13 December 2024

published in

Nature Reviews Genetics

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25 August 2017

volume

12

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25 August 2017

issue

11

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25 August 2017

page(s)

756-766

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publication type of scholarly work

25 August 2017

review article

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ON THE TOPOGRAPHY OF THE GENETIC FINE STRUCTURE

cites work

1 reference

Statistical analysis of pathogenicity of somatic mutations in cancer

21 January 2018

1 reference

Direct estimation of per nucleotide and genomic deleterious mutation rates in Drosophila

21 January 2018

1 reference

Variation in genome-wide mutation rates within and between human families

21 January 2018

1 reference

Evidence that mutation is universally biased towards AT in bacteria

21 January 2018

1 reference

Neighboring-nucleotide effects on single nucleotide polymorphisms: a study of 2.6 million polymorphisms across the human genome

21 January 2018

1 reference

Bayesian Markov chain Monte Carlo sequence analysis reveals varying neutral substitution patterns in mammalian evolution

21 January 2018

1 reference

Inference of Mutation Parameters and Selective Constraint in Mammalian Coding Sequences by Approximate Bayesian Computation

21 January 2018

1 reference

Phylogenetic estimation of context-dependent substitution rates by maximum likelihood

21 January 2018

1 reference

Initial sequencing and analysis of the human genome

21 January 2018

1 reference

CpG mutation rates in the human genome are highly dependent on local GC content

21 January 2018

1 reference

Molecular basis of base substitution hotspots in Escherichia coli

21 January 2018

1 reference

Context dependent substitution biases vary within the human genome

21 January 2018

1 reference

Substitution rate variation among sites in mitochondrial hypervariable region I of humans and chimpanzees

21 January 2018

1 reference

Substitution rate variation among sites in hypervariable region 1 of human mitochondrial DNA.

21 January 2018

1 reference

Hypervariable sites in the mtDNA control region are mutational hotspots

21 January 2018

1 reference

Does human mtDNA recombine?

21 January 2018

1 reference

Theoretical analysis of mutation hotspots and their DNA sequence context specificity

21 January 2018

1 reference

Cryptic variation in the human mutation rate

21 January 2018

1 reference

Single nucleotide differences (SNDs) in the dbSNP database may lead to errors in genotyping and haplotyping studies

21 January 2018

1 reference

The genomic distribution and local context of coincident SNPs in human and chimpanzee.

21 January 2018

1 reference

CpG-rich islands and the function of DNA methylation

21 January 2018

1 reference

Transcription induces strand-specific mutations at the 5' end of human genes

21 January 2018

1 reference

Primate CpG islands are maintained by heterogeneous evolutionary regimes involving minimal selection

21 January 2018

1 reference

Mutations of different molecular origins exhibit contrasting patterns of regional substitution rate variation

21 January 2018

1 reference

Cytosine deamination plays a primary role in the evolution of mammalian isochores

21 January 2018

1 reference

Isochores and the evolutionary genomics of vertebrates

21 January 2018

1 reference

Evolutionary consequences of nonrandom damage and repair of chromatin domains

21 January 2018

1 reference

Transcription-coupled DNA repair: two decades of progress and surprises

21 January 2018

1 reference

Transcription-associated mutational asymmetry in mammalian evolution

21 January 2018

1 reference

Gene expression, synteny, and local similarity in human noncoding mutation rates

21 January 2018

1 reference

Evidence that localized variation in primate sequence divergence arises from an influence of nucleosome placement on DNA repair.

21 January 2018

1 reference

High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells

21 January 2018

1 reference

Single-nucleotide mutation rate increases close to insertions/deletions in eukaryotes

21 January 2018

1 reference

Indel-associated mutation rate varies with mating system in flowering plants

21 January 2018

1 reference

Clusters of nucleotide substitutions and insertion/deletion mutations are associated with repeat sequences

21 January 2018

1 reference

Mutation biases and mutation rate variation around very short human microsatellites revealed by human-chimpanzee-orangutan genomic sequence alignments

21 January 2018

1 reference

Estimating the per-base-pair mutation rate in the yeast Saccharomyces cerevisiae

21 January 2018

1 reference

Distributions of selectively constrained sites and deleterious mutation rates in the hominid and murid genomes.

21 January 2018

1 reference

Evidence that replication-associated mutation alone does not explain between-chromosome differences in substitution rates

21 January 2018

1 reference

A Neutral Explanation for the Correlation of Diversity with Recombination Rates in Humans

21 January 2018

1 reference

Why do human diversity levels vary at a megabase scale?

21 January 2018

1 reference

Human SNP variability and mutation rate are higher in regions of high recombination

21 January 2018

1 reference

Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution

21 January 2018

1 reference

A genome-wide view of mutation rate co-variation using multivariate analyses

21 January 2018

1 reference

The modern molecular clock

21 January 2018

1 reference

CpG dinucleotides and the mutation rate of non-CpG DNA

21 January 2018

1 reference

Human triallelic sites: evidence for a new mutational mechanism?

21 January 2018

1 reference

Evidence for a High Frequency of Simultaneous Double-Nucleotide Substitutions

21 January 2018

1 reference

Pervasive Multinucleotide Mutational Events in Eukaryotes

21 January 2018

1 reference

Mutation rates differ among regions of the mammalian genome

21 January 2018

1 reference

Chromosomal location effects on gene sequence evolution in mammals

21 January 2018

1 reference

21 January 2018

1 reference

Genomic regionality in rates of evolution is not explained by clustering of genes of comparable expression profile

21 January 2018

1 reference

Conserved non-genic sequences - an unexpected feature of mammalian genomes

21 January 2018

1 reference

Widely distributed noncoding purifying selection in the human genome

21 January 2018

1 reference

Massive turnover of functional sequence in human and other mammalian genomes

21 January 2018

1 reference

The scale of mutational variation in the murid genome

21 January 2018

1 reference

The influence of recombination on human genetic diversity

21 January 2018

1 reference

Initial sequence of the chimpanzee genome and comparison with the human genome

21 January 2018

1 reference

Weak preservation of local neutral substitution rates across mammalian genomes

21 January 2018

1 reference

Human-macaque comparisons illuminate variation in neutral substitution rates

21 January 2018

1 reference

Impact of replication timing on non-CpG and CpG substitution rates in mammalian genomes

21 January 2018

1 reference

Human mutation rate associated with DNA replication timing

21 January 2018

1 reference

The impact of recombination on nucleotide substitutions in the human genome

21 January 2018

1 reference

Chromatin structure and evolution in the human genome.

21 January 2018

1 reference

Genomewide comparison of DNA sequences between humans and chimpanzees

21 January 2018

1 reference

Strong male-driven evolution of DNA sequences in humans and apes

21 January 2018

1 reference

Population genetic implications from sequence variation in four Y chromosome genes

21 January 2018

1 reference

Genic mutation rates in mammals: local similarity, chromosomal heterogeneity, and X-versus-autosome disparity

21 January 2018

1 reference

Male-biased mutation rate and divergence in autosomal, z-linked and w-linked introns of chicken and Turkey

21 January 2018

1 reference

Characteristics, causes and evolutionary consequences of male-biased mutation

21 January 2018

1 reference

Strong and weak male mutation bias at different sites in the primate genomes: insights from the human-chimpanzee comparison

21 January 2018

1 reference

The common biology of cancer and ageing

21 January 2018

1 reference

Exploring the Genomes of Cancer Cells: Progress and Promise

21 January 2018

1 reference

Initial genome sequencing and analysis of multiple myeloma

21 January 2018

1 reference

The mutation spectrum revealed by paired genome sequences from a lung cancer patient

21 January 2018

1 reference

A comprehensive catalogue of somatic mutations from a human cancer genome

21 January 2018

1 reference

A small-cell lung cancer genome with complex signatures of tobacco exposure

21 January 2018

1 reference

Core signaling pathways in human pancreatic cancers revealed by global genomic analyses

21 January 2018

1 reference

An integrated genomic analysis of human glioblastoma multiforme

21 January 2018

1 reference

The genomic landscapes of human breast and colorectal cancers

21 January 2018

1 reference

Functional bias and spatial organization of genes in mutational hot and cold regions in the human genome

21 January 2018

1 reference

Uncovering the mutation-fixation correlation in short lineages

21 January 2018

1 reference

The Positive Correlation between dN/dS and dS in Mammals Is Due to Runs of Adjacent Substitutions

21 January 2018

1 reference

High mutation rate and predominance of insertions in the Caenorhabditis elegans nuclear genome

21 January 2018

1 reference

Adaptive evolution of non-coding DNA in Drosophila

21 January 2018

1 reference

Patterns of intron sequence evolution in Drosophila are dependent upon length and GC content

21 January 2018

1 reference

Synonymous but not the same: the causes and consequences of codon bias

21 January 2018

1 reference

Widespread genomic signatures of natural selection in hominid evolution

21 January 2018

1 reference

Paleontological evidence to date the tree of life

21 January 2018

1 reference

High genomic deleterious mutation rates in hominids

21 January 2018

1 reference

Global patterns of human DNA sequence variation in a 10-kb region on chromosome 1.

21 January 2018

1 reference

Insertion and deletion processes in recent human history

21 January 2018

1 reference

Evolution of the mutation rate

21 January 2018

1 reference

Characterization of single-nucleotide polymorphisms in coding regions of human genes

21 January 2018

1 reference

The proteins of linked genes evolve at similar rates

21 January 2018

1 reference

Patterns of nucleotide substitution in pseudogenes and functional genes

21 January 2018

1 reference

Timing of Replication Is a Determinant of Neutral Substitution Rates but Does Not Explain Slow Y Chromosome Evolution in Rodents

21 January 2018

1 reference

The influence of nearest neighbors on the rate and pattern of spontaneous point mutations

21 January 2018

1 reference

Mutation rate distribution inferred from coincident SNPs and coincident substitutions

31 March 2020

1 reference

Genomewide association between insertions/deletions and the nucleotide diversity in bacteria

31 March 2020

1 reference

The large-scale distribution of somatic mutations in cancer genomes.

31 March 2020

1 reference

The mutation rate of the gene for haemophilia, and its segregation ratios in males and females

31 March 2020

1 reference

A highly unexpected strong correlation between fixation probability of nonsynonymous mutations and mutation rate

31 March 2020

1 reference

Patterns and rates of indel evolution in processed pseudogenes from humans and murids

31 March 2020

1 reference

Low nucleotide diversity in man

31 March 2020

1 reference

12 December 2020

Estimate of the mutation rate per nucleotide in humans

1 reference

12 December 2020

The evolution of mutation rates

1 reference

12 December 2020

The evolution of isochores: evidence from SNP frequency distributions

1 reference

12 December 2020

Neighboring base effects on substitution rates in pseudogenes

1 reference

12 December 2020

Evidence of selection on silent site base composition in mammals: potential implications for the evolution of isochores and junk DNA.

1 reference

12 December 2020

On the Organization of Higher Chromosomes

1 reference

12 December 2020

Molecular Biology and Evolution

6

3

322

M Bulmer

1986

1 reference

https://api.crossref.org/works/10.1038/NRG3098

13 December 2024

Identifiers

DOI

10.1038/NRG3098

1 reference

25 August 2017

1 reference