The renaissance of continuous culture in the post-genomics age. (Q37787855)

23 August 2017

The renaissance of continuous culture in the post-genomics age. (English)

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23 August 2017

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Alan T Bull

1

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23 August 2017

11 September 2010

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Journal of Industrial Microbiology & Biotechnology

23 August 2017

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23 August 2017

37

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23 August 2017

10

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23 August 2017

993-1021

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The continuous culture of bacteria; a theoretical and experimental study

23 August 2017

1 reference

https://api.crossref.org/works/10.1007%2FS10295-010-0816-4

Proteome analysis of yeast response to various nutrient limitations

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10295-010-0816-4

XLV.—The Rate of Multiplication of Micro-organisms: A Mathematical Study

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10295-010-0816-4

In vivo dynamics of glycolysis in Escherichia coli shows need for growth-rate dependent metabolome analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10295-010-0816-4

Element content of Pseudomonas fluorescens varies with growth rate and temperature: A replicated chemostat study addressing ecological stoichiometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10295-010-0816-4

Prey food quality affects flagellate ingestion rates.

21 January 2018

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A microfluidic chemostat for experiments with bacterial and yeast cells.

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Tigecycline does not induce proliferation or cytotoxin production by epidemic Clostridium difficile strains in a human gut model.

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Compiling a molecular inventory for Mycobacterium bovis BCG at two growth rates: evidence for growth rate-mediated regulation of ribosome biosynthesis and lipid metabolism

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Dynamic 13C-tracer study of storage carbohydrate pools in aerobic glucose-limited Saccharomyces cerevisiae confirms a rapid steady-state turnover and fast mobilization during a modest stepup in the glucose uptake rate

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Continuous enrichment cultures: insights into prokaryotic diversity and metabolic interactions in deep-sea vent chimneys

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Proteome analysis of the Escherichia coli heat shock response under steady-state conditions

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Effects of rapid prey evolution on predator-prey cycles

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Brucella suis in Aerated Broth Culture: III. Continuous Culture Studies

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Analysis of growth of Lactobacillus plantarum WCFS1 on a complex medium using a genome-scale metabolic model.

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Sequences and consequences

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Microfluidics-based systems biology

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Physiological and transcriptional responses of Saccharomyces cerevisiae to zinc limitation in chemostat cultures

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Chemostat for the cultivation of moulds.

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Thermodesulfatator atlanticus sp. nov., a thermophilic, chemolithoautotrophic, sulfate-reducing bacterium isolated from a Mid-Atlantic Ridge hydrothermal vent

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Genotype-by-environment interactions influencing the emergence of rpoS mutations in Escherichia coli populations

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Saccharomyces cerevisiae SFP1: at the crossroads of central metabolism and ribosome biogenesis.

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Modeling Neisseria meningitidis B metabolism at different specific growth rates

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Evolutionary genomics of ecological specialization

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Microchemostat-microbial continuous culture in a polymer-based, instrumented microbioreactor

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Periodic selection in longterm continuous-flow cultures of the filamentous fungus Fusarium graminearum.

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Cyclic AMP-dependent catabolite repression is the dominant control mechanism of metabolic fluxes under glucose limitation in Escherichia coli

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Chemostat-based micro-array analysis in baker's yeast.

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Genome-wide transcriptional analysis of Saccharomyces cerevisiae during industrial bioethanol fermentation

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Manipulation of the physiology of clavulanic acid production in Streptomyces clavuligerus

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Hypervirulent mutant of Mycobacterium tuberculosis resulting from disruption of the mce1 operon

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Spontaneous deletion of a 209-kilobase-pair fragment from the Escherichia coli genome occurs with acquisition of resistance to an assortment of infectious phages.

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Functionally distinct genes regulated by hydrogen limitation and growth rate in methanogenic Archaea

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Spontaneous reaction silencing in metabolic optimization

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On-line monitoring of continuous beer fermentation process using automatic membrane inlet mass spectrometric system

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Selection of objective function in genome scale flux balance analysis for process feed development in antibiotic production

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NMR bioreactor development for live in-situ microbial functional analysis

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Description of the chemostat

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Super life--how and why 'cell selection' leads to the fastest-growing eukaryote.

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How Geobacteraceae may dominate subsurface biodegradation: physiology of Geobacter metallireducens in slow-growth habitat-simulating retentostats.

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Comparative transcriptomics reveals key gene expression differences between the human and bovine pathogens of the Mycobacterium tuberculosis complex

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Protein material costs: single atoms can make an evolutionary difference

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Clostridium difficile infection: update on emerging antibiotic treatment options and antibiotic resistance

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Effects of Fluoride on Carbohydrate Metabolism by Washed Cells of Streptococcus mutans Grown at Various pH Values in a Chemostat

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Identification and characterization of high-flux-control genes of yeast through competition analyses in continuous cultures.

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The Moore's Law of microbiology - towards bacterial culture miniaturization with the micro-Petri chip.

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The genetic requirements for fast and slow growth in mycobacteria

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Evaluating the effects of chlortetracycline on the proliferation of antibiotic-resistant bacteria in a simulated river water ecosystem

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Systematic changes in gene expression patterns following adaptive evolution in yeast

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Transcription, translation, and the evolution of specialists and generalists

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Response of Porphyromonas gingivalis to heme limitation in continuous culture.

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12 December 2020

Competition along a Spatial Gradient of Resource Supply: A Microbial Experimental Model

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Co-adhesion and biofilm formation by Fusobacterium nucleatum in response to growth pH

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The gradostat: a bidirectional compound chemostat and its application in microbiological research

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Enzyme evolution in a microbial community growing on the herbicide Dalapon

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Microfabrication meets microbiology

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Optimized evolution in the cytostat: a Monte Carlo simulation

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Comparative transcriptomic analysis of Porphyromonas gingivalis biofilm and planktonic cells

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Analysis of the Escherichia coli response to glycerol pulse in continuous, high-cell density culture using a multivariate approach

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Growth-limiting intracellular metabolites in yeast growing under diverse nutrient limitations

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The repertoire and dynamics of evolutionary adaptations to controlled nutrient-limited environments in yeast

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The physiology of lactate production by Lactobacillus delbreuckii in a chemostat with cell recycle

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Transcriptional response of the model planctomycete Rhodopirellula baltica SH1(T) to changing environmental conditions

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Sulfate reduction at pH 5 in a high-rate membrane bioreactor: reactor performance and microbial community analyses.

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The energy spilling reactions of bacteria and other organisms

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Rapid strain improvement through optimized evolution in the cytostat

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Variation of polar lipid composition of Bacillus subtilis (Marburg) with different growth conditions

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Long-term monitoring of bacteria undergoing programmed population control in a microchemostat

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Validation of a Three-Stage Compound Continuous Culture System for Investigating the Effect of Retention Time on the Ecology and Metabolism of Bacteria in the Human Colon

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Effects of exposure of Clostridium difficile PCR ribotypes 027 and 001 to fluoroquinolones in a human gut model

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Clonal adaptive radiation in a constant environment

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Transcriptomic analysis identifies growth rate modulation as a component of the adaptation of mycobacteria to survival inside the macrophage.

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Transcriptional monitoring of steady state and effects of anaerobic phases in chemostat cultures of the filamentous fungus Trichoderma reesei

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Vancomycin production is enhanced in chemostat culture with biomass-recycle.

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Escherichia coli transcriptome dynamics during the transition from anaerobic to aerobic conditions.

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The role of energy-spilling reactions in the growth of Klebsiella aerogenes NCTC 418 in aerobic chemostat culture

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Energetic limits to metabolic flexibility: responses of Saccharomyces cerevisiae to glucose-galactose transitions.

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Phytoplankton species richness scales consistently from laboratory microcosms to the world's oceans

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Modeling Neisseria meningitidis metabolism: from genome to metabolic fluxes

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Role of transcriptional regulation in controlling fluxes in central carbon metabolism of Saccharomyces cerevisiae. A chemostat culture study.

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Coordination of growth rate, cell cycle, stress response, and metabolic activity in yeast

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The Physiology and Metabolic Control of Fungal Growth

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Application of 16O/18O reverse proteolytic labeling to determine the effect of biofilm culture on the cell envelope proteome of Porphyromonas gingivalis W50.

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Control of specific growth rate in Saccharomyces cerevisiae

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The Penicillium chrysogenum aclA gene encodes a broad-substrate-specificity acyl-coenzyme A ligase involved in activation of adipic acid, a side-chain precursor for cephem antibiotics

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A cultural divide on the use of chemostats.

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Rapid evolution buffers ecosystem impacts of viruses in a microbial food web.

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Genome-wide transcriptional variation within and between steady states for continuous growth of the hyperthermophile Thermotoga Maritima

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Experiments with the Chemostat on spontaneous mutations of bacteria

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Protein carbon content evolves in response to carbon availability and may influence the fate of duplicated genes

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The maintenance energy of bacteria in growing cultures

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Directed evolution of a filamentous fungus for thermotolerance

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Quantitative physiology of Saccharomyces cerevisiae at near-zero specific growth rates.

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Common features and interesting differences in transcriptional responses to secretion stress in the fungi Trichoderma reesei and Saccharomyces cerevisiae

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Exometabolic and transcriptional response in relation to phenotype and gene copy number in respiration-related deletion mutants of S. cerevisiae.

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Tuberculosis: what we don't know can, and does, hurt us.

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The population dynamics and control of tuberculosis

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Prolonged selection in aerobic, glucose-limited chemostat cultures of Saccharomyces cerevisiae causes a partial loss of glycolytic capacity

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The 1994 Marjory Stephenson Prize Lecture. Evolution of the Quorn myco-protein fungus, Fusarium graminearum A3/5.

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Microbial maintenance: a critical review on its quantification

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The timescale of phenotypic plasticity and its impact on competition in fluctuating environments

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Identity of the growth-limiting nutrient strongly affects storage carbohydrate accumulation in anaerobic chemostat cultures of Saccharomyces cerevisiae

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Cytosolic NADPH metabolism in penicillin-G producing and non-producing chemostat cultures of Penicillium chrysogenum

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Exploiting combinatorial cultivation conditions to infer transcriptional regulation

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Nonequilibrium coexistence in a competition model with nutrient storage

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Development of a novel continuous culture device for experimental evolution of bacterial populations

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Dynamics and nutritional ecology of a nanoflagellate preying upon bacteria.

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The cytostat: A new way to study cell physiology in a precisely defined environment.

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Physiology of Aspergillus niger in oxygen-limited continuous cultures: Influence of aeration, carbon source concentration and dilution rate

1 reference

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The proteomic profile of Fusobacterium nucleatum is regulated by growth pH.

1 reference

12 December 2020

Competition along a spatial gradient of resource supply: a microbial experimental model.

1 reference

12 December 2020

10.1007/S10295-010-0816-4

Identifiers

DOI

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release_7tb7rw6yvfcltmhkjli3ffxp2m

23 August 2017

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Fatcat

https://api.fatcat.wiki/v0/release/7tb7rw6yvfcltmhkjli3ffxp2m

24 November 2022

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PubMed ID

20835748

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PubMed ID

20835748