Tracing the HIV-1 subtype B mobility in Europe: a phylogeographic approach (Q37278724)

19 August 2017

Tracing the HIV-1 subtype B mobility in Europe: a phylogeographic approach (English)

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19 August 2017

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48

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19 August 2017

43

Kristel Van Laethem

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Claudia Kücherer

24

Claudia Kücherer

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Elisabeth Puchhammer-Stöckl

19 August 2017

34

Elisabeth Puchhammer-Stöckl

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19 August 2017

10

Claudia Balotta

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Birgitta Åsjö

9

Birgitta Asjö

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19 August 2017

Dominique Costagliola

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Dominique Costagliola

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Klaus Korn

Klaus Korn

23

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Maja Stanojevic

Maja Stanojevic

41

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Mika Salminen

Mika O Salminen

36

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Ricardo Camacho

Ricardo Camacho

12

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Dimitrios Paraskevis

Dimitrios Paraskevis

1

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Maurizio Zazzi

Maurizio Zazzi

46

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Oliver G. Pybus

Oliver Pybus

2

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Andrea De Luca

Andrea De Luca

16

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Sabine Yerly

45

Sabine Yerly

1 reference

19 August 2017

Vincent Soriano

39

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Thomas Leitner

25

Thomas Leitner

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7

Jan Albert

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Andrzej Horban

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Daniel Struck

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19 August 2017

Annemarie M J Wensing

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Annemarie Mj Wensing

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Suzie Coughlan

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Zehava Grossman

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Jean-Claude Schmit

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49

SPREAD Programme

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13

Marie-Laure Chaix

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Clive Loveday

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Enzo Boeri

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18

Inge Derdelinckx

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Laurence Meyer

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Eline Lm Op de Coul

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Vidar Ormaasen

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19 August 2017

Gkikas Magiorkinis

3

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Angelos Hatzakis

4

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19 August 2017

David A van de Vijver

6

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19 August 2017

Guiseppe Angarano

8

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19 August 2017

Carmen de Mendoza

17

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19 August 2017

Osama Hamouda

20

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19 August 2017

Im Hoepelman

21

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19 August 2017

Eilidh Macrae

27

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19 August 2017

I Maljkovic-Berry

28

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19 August 2017

Claus Nielsen

30

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19 August 2017

Luc Perrin

33

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Lidia Ruiz

35

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19 August 2017

Rob Schuurman

38

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J Stanczak

40

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M Violin

44

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19 August 2017

Charles A Boucher

47

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19 August 2017

20 May 2009

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6

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19 August 2017

49

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Creative Commons Attribution 2.0 Generic

19 August 2017

start time

20 May 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

exact match

https://scigraph.springernature.com/pub.10.1186/1742-4690-6-49

0 references

cites work

A rapid bootstrap algorithm for the RAxML Web servers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Evolutionary history and phylogeography of human viruses

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Multiple HIV-1 introductions into the Swedish intravenous drug user population

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Episodic sexual transmission of HIV revealed by molecular phylodynamics

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

The emergence of HIV/AIDS in the Americas and beyond

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Phylogenetic surveillance of viral genetic diversity and the evolving molecular epidemiology of human immunodeficiency virus type 1.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

A statistical phylogeography of influenza A H5N1.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Transmission of simian immunodeficiency virus SIVcpz and the evolution of infection in the presence and absence of concurrent human immunodeficiency virus type 1 infection in chimpanzees

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Genetic analysis reveals the complex structure of HIV-1 transmission within defined risk groups

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Viral gene sequences reveal the variable history of hepatitis C virus infection among countries

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

U.S. Human immunodeficiency virus type 1 epidemic: date of origin, population history, and characterization of early strains

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Travel and the introduction of human immunodeficiency virus type 1 non-B subtype genetic forms into Western countries.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Analysis of HIV-1 genetic subtypes in Finland reveals good correlation between molecular and epidemiological data

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

AIDS as a zoonosis: scientific and public health implications

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Origin of HIV-1 in the chimpanzee Pan troglodytes troglodytes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

The molecular epidemiology of human immunodeficiency virus type 1 in six cities in Britain and Ireland.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Accurate reconstruction of a known HIV-1 transmission history by phylogenetic tree analysis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

HIV population dynamics in vivo: implications for genetic variation, pathogenesis, and therapy

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Clinical and epidemiological survey of acquired immune deficiency syndrome in Europe

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Acquired immunodeficiency syndrome in African patients.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Seroepidemiology of HTLV-III antibody in Danish homosexual men: prevalence, transmission, and disease outcome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

A cladistic measure of gene flow inferred from the phylogenies of alleles

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Isolation and characterization of a new chimpanzee lentivirus (simian immunodeficiency virus isolate cpz-ant) from a wild-captured chimpanzee

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Acquired immunodeficiency syndrome after travelling in Africa: an epidemiological study in seventeen Caucasian patients

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Transmission of drug-resistant HIV-1 in Europe remains limited to single classes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

High rates of forward transmission events after acute/early HIV-1 infection

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Prevalence of drug-resistant HIV-1 variants in untreated individuals in Europe: implications for clinical management

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Molecular footprint of drug-selective pressure in a human immunodeficiency virus transmission chain

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

A sudden epidemic of HIV type 1 among injecting drug users in the former Soviet Union: identification of subtype A, subtype B, and novel gagA/envB recombinants

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

The molecular epidemiology of human immunodeficiency virus type 1 in Edinburgh

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Isolation and partial characterization of an HIV-related virus occurring naturally in chimpanzees in Gabon

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

26 June 2018

Minimally colored trees.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Molecular epidemiology and prevalence of drug resistance-associated mutations in newly diagnosed HIV-1 patients in Portugal.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

HIV-1 subtypes in Spain: a retrospective analysis from 1995 to 2003.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

French national sentinel survey of antiretroviral drug resistance in patients with HIV-1 primary infection and in antiretroviral-naive chronically infected patients in 2001-2002.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Phylogenetic reconstruction of a known HIV-1 CRF04_cpx transmission network using maximum likelihood and Bayesian methods.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Rising prevalence of HIV-1 non-B subtypes in Belgium: 1983-2001.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Stable prevalence of genotypic drug resistance mutations but increase in non-B virus among patients with primary HIV-1 infection in France

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

HIV-1 subtypes in Luxembourg, 1983-2000.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Simultaneous introduction of HIV type 1 subtype A and B viruses into injecting drug users in southern Ukraine at the beginning of the epidemic in the former Soviet Union

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

The impact of immigration on env HIV-1 subtype distribution among heterosexuals in the Netherlands: influx of subtype B and non-B strains

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

HIV-1 subtypes in Denmark

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Using phylogenetic analysis to trace HIV-1 migration among western European injecting drug users seroconverting from 1984 to 1997.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

High frequency of non-B subtypes in newly diagnosed HIV-1 infections in Switzerland

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Different distribution of HIV type 1 genetic variants in European patients with distinct risk practices.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Extreme founder effect in an HIV type 1 subtype A epidemic among drug users in Svetlogorsk, Belarus.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

An HIV type 1 epidemic among injecting drug users in the former Soviet Union caused by a homogeneous subtype A strain.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Evidence for HIV type 1 strains of U.S. intravenous drug users as founders of AIDS epidemic among intravenous drug users in northern Europe.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Epidemiological aspects of acquired immune deficiency syndrome in France

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Increasing Prevalence of HIV‐1 Subtype A in Greece: Estimating Epidemic History and Origin

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

HIV-1 genetic subtype A/B recombinant strain causing an explosive epidemic in injecting drug users in Kaliningrad

20 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717046

Dynamics of the HIV-1 subtype distribution in the Swedish HIV-1 epidemic during the period 1980 to 1993

20 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19457244

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Origins and evolution of AIDS viruses: estimating the time-scale

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19457244

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Investigation of HIV-1 transmission events by phylogenetic methods: requirement for scientific rigour

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19457244

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1742-4690-6-49

1 reference

Dimensions Publication ID

19 August 2017

0 references

1 reference

19 August 2017

1 reference